SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13606
Pre Gene Modal
BGIBMGA014069
Annotation
PREDICTED:_axoneme-associated_protein_mst101(2)_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.641
 

Sequence

CDS
ATGGCGTCCGCCGACACATCGACCGCCAGCAGCCAGATCTCCGCCTTGCCAGTCGAAGAACACAAGCGTATCGTCGACGAGTCGCTCCTCACCAAAATGAAGAGCCTCGTCGAAAGGATAAGGCTGGAGAACACGACCTTGAAGAAGTCGCTCGACATCGAGCGGAGCGAAGTCAGAGCACTTAAAGCCCGTTATGACAGCGCTCTCAGGAATCTAAAGACTGAACACAGGAAGCGAGAAGAGTTCTTAGAAAAACAGTTGAGAACCATCGCTAGGCCCCACAAACAGACGGACGATGCACAGTCCGCTTGTGGCAGACTCACAGACGTCAAAAGATTAACAACAGAGGTTCAGTCTTTAAAAGCAGCCTATAAGGGTCTTCAAGAAAAACTTAAGCTGGAGGAAATCAAATCGAAGGAGCGGACAATAGCACTGCTGAAACGAGAGGCGGCAAAATCGACCGCGCAACAAAACGATCAGGTTATTTCGCTGAAGTCGGTTCCATTGTGTTCATGTCTTAATTTGGAATATCAGTTATCGTTATCTGCAAAACGCCTCATATTTTCGTGA
Protein
MASADTSTASSQISALPVEEHKRIVDESLLTKMKSLVERIRLENTTLKKSLDIERSEVRALKARYDSALRNLKTEHRKREEFLEKQLRTIARPHKQTDDAQSACGRLTDVKRLTTEVQSLKAAYKGLQEKLKLEEIKSKERTIALLKREAAKSTAQQNDQVISLKSVPLCSCLNLEYQLSLSAKRLIFS

Summary

Pfam
PF16034   JAKMIP_CC3
Interpro
IPR031994   JAKMIP_C       

Ontologies

Topology

Length:
189
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00409
Exp number, first 60 AAs:
0
Total prob of N-in:
0.17626
outside
1  -  189
 
 

Population Genetic Test Statistics

Pi
22.376016
Theta
19.460743
Tajima's D
1.072172
CLR
0.816609
CSRT
0.696915154242288
Interpretation
Uncertain
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