Silkworm Genome Informatics Database

Gene

KWMTBOMO13603

Pre Gene Modal

BGIBMGA011006

Annotation

Methionine_synthase_reductase_[Papilio_machaon]

Location

Bomo_Chr23(+):2545634-2550378 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.272

CDS

ATGGATTTTATGCCGACGGGTTATTTACCCGATAGCGTTTATAGAGAACTAGCTTGGTATGGTATTCTGCAAATTCAACCACTGCATCACAGTGCCAAACACAAAGTTGCTGCCCAGTTAATTTGGCAGCACACTCTTGGGAGACCTCATATTATATTGGAAAACCCTCCTCAGTCCACTCAATCGCCAGGTAAGATAAGCCGACTGATACTAGCGGAGGAGGCGGCGAAGTGGTCAAGGGAACAGCGAGCCGCCCAAGAAGTGCTGATGGAGAATATCAAGAGTGGCGGTAACGGGTTAACCGTGAGAACGGTTATCAGCGCTCAGAAGAAAACCACTTACATCATACAGAATGGTAATTACTACAGATGTCCCGACGGCTCTGAACCAGATCTAGATGCTTATAGAGTCCAAGCGAACATGCACGAACGAAAATGCACGTTTGGAAGACAATCCATTCCAGTACCGGTCGATCCCTGCATAGAGGCCGAAGTGGCGCCAATAGAATACTCTTTCCACGAAGGTTGGATGTTCTGTCTCGGTAATGGCGAGAGAGAAAACAATTATTTCCAAAACGGAACATTGGACTGTGGGAACAAAACTAAGGTGCCCGTTCATGAGTTTCTAGATCTATGCGCCATCGACAATAACATTGTTATAACATTTGATTACTTCGGTGACGAGCCACGAAAAGACATGATGCACAATGCGACATTGTGCACTTCTTGGGATCCATGCCGATTGTCTTATTTGTATCGACTTGAGCCGCCTCCAGTCGAAATGACGCCATCCTTCCCTACCACAACGCCTAATCCATGCGAGATAACAGTGTGCCCAGATTGCTTGGATGGGGTCACAGAAAGGATCGGAGAAGTTATTGAAAGTACGTTTATGGAGGGTAGAACTAAGGAGCACCATCTTGTTTGGGGACAAGTTGAAAAATTGTCCATCTGTAAACAGCAAATTATAGTTCGAAAACTCACCGAATTAGCGCTAGTGTAG

Protein

MDFMPTGYLPDSVYRELAWYGILQIQPLHHSAKHKVAAQLIWQHTLGRPHIILENPPQSTQSPGKISRLILAEEAAKWSREQRAAQEVLMENIKSGGNGLTVRTVISAQKKTTYIIQNGNYYRCPDGSEPDLDAYRVQANMHERKCTFGRQSIPVPVDPCIEAEVAPIEYSFHEGWMFCLGNGERENNYFQNGTLDCGNKTKVPVHEFLDLCAIDNNIVITFDYFGDEPRKDMMHNATLCTSWDPCRLSYLYRLEPPPVEMTPSFPTTTPNPCEITVCPDCLDGVTERIGEVIESTFMEGRTKEHHLVWGQVEKLSICKQQIIVRKLTELALV

Similarity

Belongs to the AB hydrolase superfamily. Lipase family.

Uniprot

A0A3S2NMY4 A0A0N0PAV8 A0A3S2P1X6 A0A1E1WTN2 H9JNA3 A0A2H1WZI6 + More
A0A212EJI7 A0A2A4JAS6 A0A194PXI7 A0A212EYM8 A0A2A4JCA3 A0A0L7KX22

Pubmed

26354079 19121390 22118469 26227816

EMBL

RSAL01000002 RVE55064.1 KQ461153 KPJ08647.1 RVE55011.1 GDQN01000661 + More
JAT90393.1 BABH01033325 ODYU01012190 SOQ58366.1 AGBW02014457 OWR41646.1 NWSH01002102 PCG69185.1 KQ459595 KPI95860.1 AGBW02011467 OWR46599.1 PCG69184.1 JTDY01004907 KOB67604.1

Proteomes

UP000283053 UP000053240 UP000005204 UP000007151 UP000218220 UP000053268 + More
UP000037510

PRIDE

H9JNA3

Pfam

PF00667   FAD_binding_1        + More
PF00151   Lipase
PF00175   NAD_binding_1

Interpro

IPR033906   Lipase_N        + More
IPR017927   FAD-bd_FR_type
IPR001433   OxRdtase_FAD/NAD-bd
IPR023173   NADPH_Cyt_P450_Rdtase_alpha
IPR017938   Riboflavin_synthase-like_b-brl
IPR013818   Lipase/vitellogenin
IPR029058   AB_hydrolase
IPR003097   CysJ-like_FAD-binding
IPR039261   FNR_nucleotide-bd
IPR001709   Flavoprot_Pyr_Nucl_cyt_Rdtase

SUPFAM

SSF52343   SSF52343        + More
SSF63380   SSF63380
SSF53474   SSF53474

Gene 3D

1.20.990.10 3.40.50.1820 3.40.50.80

CDD

cd00707 Pancreat_lipase_like

ProteinModelPortal

A0A3S2NMY4 A0A0N0PAV8 A0A3S2P1X6 A0A1E1WTN2 H9JNA3 A0A2H1WZI6 + More
A0A212EJI7 A0A2A4JAS6 A0A194PXI7 A0A212EYM8 A0A2A4JCA3 A0A0L7KX22

KEGG

101746333 no KO assigned | (RefSeq) uncharacterized LOC101746333

GO

GO:0005576 GO:0016491

Subcellular location

Secreted

Length:

333

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000790000000000001

Exp number, first 60 AAs:

0.00056

Total prob of N-in:

0.00300

outside

1 - 333

Pi

212.718877

Theta

151.404432

Tajima's D

0.582144

CLR

127.430724

CSRT

0.542672866356682

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics