SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13591  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011002
Annotation
PREDICTED:_aminoacylase-1-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.529
 

Sequence

CDS
ATGTTCAATTTAAAAAGAAGAACTTCAGGCAAGATTGACCCCAGCGTCTCGACCTTACAGAACTATCTTAGAATACGTTCAGTACATCCGAACGTTGACTACAATGAATGCATCAACTTCCTCAGAAATGAAGCTGAAAAGATTGGACTGCAAGTGCAAGTGGTCGAACCTTTGCCAAAGAAGCCGACGTTGGTGATGACCTGGTTAGGAGAGCAGCCTGAGCTGCCGAGCATATTACTCAACTCTCATATGGACGTGGTGCCTGTCTTCGAGAACAGTTGGAAGCATCCCCCCTTTGCTGCTGAAATAGAAGACAACATAATTTACGCTAGAGGAGTTCAAGACATGAAATCGGTTGGAATTCAGTACATTGAGGCCGTGAGGAGGCTGAAGCAAACCGGCGTCAAGCTCAAAAGGACTGTGCATCTGTCATTTGTACCCGACGAGGAGATTGGTGGCGCTACTGGAATGGGGAAGTTCGTCCAGACGGACGTCTTCAAAAATATGAATGTCGGCTTCGCTCTCGATGAGGGCATCGCATCCGCTAACGATGATTACCTGGTCTTCAATGGCGAAAGAATAATTTGGCATGTGAAAATCACTTGTCCCGGAAAATCCGGTCACGGTTCCCTTCTGCTCCCGGACAACTGCGGCGAAAAGTTGCGGTACATAATCGATAAGTTCATGGACCTGCGTCAGGAGTCCGTTAAAAAGTTGGCTGACAACCCACAGCTAACCATCGGTGACGTCACTAGCGTCAACCTCACCATGATCTCCGGAGGTATACAGAACAATGTGGTTCCTGAACAATTTACAGCCAACTTCGACCTTCGCATAGCTCTGAACGTCGATTTAAAAGAATTCGAAAATATGATTCAGAAATGGTGTACTGAAGCTGGTCGCGGCGTCACGTACGAGTTTGAGCAGAAGGATCCTTACACCACACCAACTCAGCTAGACGATGCCAACATTTACTGGAAAGCTTTCAAACAAACCGCAGAGGAACTGGGAATGTCAATTAAGCCTCAAACGTTTACGGGAGGCACCGACAGCCGCTATCTTCGGGAACTTGGCATCCCGGCGCTGGGCTTCTCGCCGATACACAACACCACGCCCGCGCTGCATGAGCACAACGAGCATCTAGGCTTGGACGTCTTCATCAATGGAATAGCGGTGTACCAGAGCATGATAAGAGCTGTAGCTAATGCCTAA
Protein
MFNLKRRTSGKIDPSVSTLQNYLRIRSVHPNVDYNECINFLRNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQPELPSILLNSHMDVVPVFENSWKHPPFAAEIEDNIIYARGVQDMKSVGIQYIEAVRRLKQTGVKLKRTVHLSFVPDEEIGGATGMGKFVQTDVFKNMNVGFALDEGIASANDDYLVFNGERIIWHVKITCPGKSGHGSLLLPDNCGEKLRYIIDKFMDLRQESVKKLADNPQLTIGDVTSVNLTMISGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYEFEQKDPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRAVANA

Summary

EMBL
BABH01033306    BABH01033307    BABH01033304    DQ311332    ABD36276.1    BABH01033305    + More
KZ149909    PZC78193.1    RSAL01000002    RVE55002.1    RVE55055.1    KQ459595    KPI95869.1    KQ459592    KPI96806.1    KQ461194    KPJ06971.1    AGBW02007778    OWR54568.1    BABH01037200    BABH01037201    ODYU01005458    SOQ46337.1    GDKW01001674    JAI54921.1    KQ971372    KYB25257.1    KK852801    KDR16327.1    ADMH02000148    ETN67605.1    PYGN01000970    PSN38838.1    GAMD01003060    JAA98530.1    GANO01002088    JAB57783.1    KQ434857    KZC08889.1    GGFJ01005848    MBW54989.1    NEVH01003737    PNF40375.1    GGFJ01005847    MBW54988.1    ACPB03023997    ACPB03025303    GAMC01014710    JAB91845.1    KQ414619    KOC67717.1    GBGD01001711    JAC87178.1    GALX01002936    JAB65530.1    KQ760974    OAD58563.1    KA644835    AFP59464.1    GGFM01003839    MBW24590.1    JXUM01073756    JXUM01073757    JXUM01073758    JXUM01073759    KQ562794    KXJ75120.1    CH964251    EDW82934.1    GFDF01001166    JAV12918.1    GFDF01001181    JAV12903.1    DS232078    EDS34121.1    GGFK01006396    MBW39717.1    AJWK01005087    CH477736    EAT36742.1    GFDL01005996    JAV29049.1    EAT36741.1    ATLV01017170    KE525157    KFB41911.1    GL762535    EFZ21239.1    CH933806    EDW15005.1    KRG01314.1    CH954181    EDV49623.1    OUUW01000013    SPP87673.1    CP012523    ALC40178.1    AXCM01002614    CH940650    EDW68251.1    GL448516    EFN84447.1    GEZM01003849    JAV96527.1    APCN01001063    KQ435903    KOX69073.1    CH964272    EDW84997.1    KZ288280    PBC29616.1    CH933807    EDW13291.1    CH480815    EDW42720.1    EZ423237    ADD19513.1    CH916368    EDW03378.1    GECZ01021711    JAS48058.1    AXCN02001335    CM000160    EDW98095.1    CH954182    EDV54057.1    CH902617    EDV41514.2    CH917093    EDW04843.1    EDV42527.1    CH479179    EDW23845.1    AAAB01008847    EAA06832.4    CM000364    EDX14015.1    EDW96817.1    CM000070    EDY67743.1    CH476048    EDY71312.1    OUUW01000005    SPP81199.1    EDY67583.1    JRES01000781    KNC28371.1    AE014297    AAF56094.2    AAN13926.1    AHN57477.1    AY119627    AAM50281.2    EDV42526.2    CH916373    EDV95053.1    EFA10313.1    EDW43286.1    SPP81200.1    GEDC01016938    JAS20360.1    KK107133    QOIP01000011    EZA58129.1    RLU16809.1   
Pfam
PF01546   Peptidase_M20        + More
PF07687   M20_dimer
PF00096   zf-C2H2
PF07776   zf-AD
Interpro
IPR011650   Peptidase_M20_dimer        + More
IPR002933   Peptidase_M20       
IPR036264   Bact_exopeptidase_dim_dom       
IPR010159   N-acyl_aa_amidohydrolase       
IPR001261   ArgE/DapE_CS       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF55031   SSF55031        + More
SSF57667   SSF57667       
PDB
1Q7L     E-value=1.03854e-50,     Score=505

Ontologies

Topology

Length:
403
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03019
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01663
outside
1  -  403
 
 

Population Genetic Test Statistics

Pi
226.981602
Theta
180.794326
Tajima's D
-0.852662
CLR
0.541473
CSRT
0.16369181540923
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
24402669 GVTYEFEQK 96.15 2e-12
24402669 QSVWSSSIAATIAAK 95.45 1e-08
24402669 RTTTAVQFNVPNIVNQVR 95.24 2e-08
24402669 HPDYPFQIA 100.00 1e-05
20822545 HPPFAAEIENNVIYAR 100.00 5e-04
20822545 HPPFAAEIENNVIYAR 100.00 5e-04
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