Gene

KWMTBOMO13585

Pre Gene Modal

BGIBMGA010999

Annotation

PREDICTED:_transmembrane_protein_39A_[Amyelois_transitella]

Location

Bomo_Chr23(+):2292835-2301626      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.731

CDS

ATGAGTTGTACGGAAAATGAAAGTGGCCCTTTTGTCGTGTTCTTCTTACCAGCAATTGTCGGCTGTCTGACTATACTTTTAGCTAGACGCTGGGCAAATTCTCAAGTTAGCAATACTTCATCAACAGCCGTCTCAAGACGGCGGAAAATTATTAAAGACCCGCTCATTAAGAGACCTTTGCCTCCTATCGCTTGTAAAATGGTTCACCCTGGAGCGAAAAAGGCCACAGGGACGAATAATAAGAAGTGTACATACCCAGTTGAGGATGATGTAAGTGGGGGGAAACGTGTTGGCCGTCAAACTAGGGTGACTCCAAATACAGCGCCAACAGTAACACTAGCAGATATCAAGCTAGCTGAAGGACCCATACCACCGAAACACATTCCATTCCCACATATACCCCAAGATGGACCGTTACTATTTGAAGTACTGATGTTTATGTTCACACTGGCAGCAACAGGACTACAGTTTTTGAACCTGTATAGGACCACTTGGTGGCTACCAAATTCATACACAAACCAGGCTATGAATTTCTACCTGATCGACCCACATTTGGTAGCTTTTATAATTACTTTACTATTCAGAAGATTATTGTTGAGCATTAGCTTGGTCATTTTGAGGATGATGCTGCCACCGAAATTAATGCCACAGGCTGTGGTGGCTGCGAGAATGTTCATCCTTGGAGTGATATTAGGAGCCCTTGCCTGGTGCACATACTTCATCATGCTTAAATATCCACTTCTCAAGATATTCTACTTGTGTTATCCCGCAGTAGTATACGTGCTCCTATTCGGCTTCCAATCATCACCGTTCTTGGAGCTGAACAACTCTGAGGCCCCGCCGCTGCACTGCTGCACGCACGACCCGGGGCAGGTCAGGGCCGAGGTGGAGGTGCTCAGGCACGACTTCAATATGAGGGTCAAGAAAATACTCTTCAATTCGGTGTCCGGGGCTTATTACTCCAGCTTCATACCTTGCTGTTTTGCGCAGCCCTACCTGTACTACGAGGTGTATGGGGCGTCGCAGCAGATCGCGTTTGTGTTGGGAGGACTGTTCGGTCGCTACGTGAGCCAGCTGCTCGGCTCCGCCTTCTGCGACGTGCCGCATCGAGCCGCCCTGCACCTCGGCCGCTGGGACCCTCTACCTACGGACGTGAGCGGCGAGATCCCGGAGTGGTCGGAGGACAAGCTGTGGAGCGCGGGGGCGCGGGTGCGCTGCGGCGGCGCGGGGTACGCGGCCGCCTCCCCCACGGTGGCCGCGCGACCCGGCTGCCCGGAGCACATACGGTTTCACAGCGTCTTCATAAACCCTTCGAAGCTACTATGTCTGCTGTTGAGTCTGCATTTGTCATTAATCGTCTTACAACTATGTTTGTTATTCAGTTCGATACCGTGGCATAACTTTTTATCGATAGTGATATTACTTTTCATCAATTACTATTCACTATTCAAGATGGTTCGAGATTATTTAGTCGCTTGGAAAGTGTATAGAGCTGAAAATATAATACAGGACAAAAATAATACAATATCGATTTCTAATTAG

Protein

MSCTENESGPFVVFFLPAIVGCLTILLARRWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPGAKKATGTNNKKCTYPVEDDVSGGKRVGRQTRVTPNTAPTVTLADIKLAEGPIPPKHIPFPHIPQDGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSYTNQAMNFYLIDPHLVAFIITLLFRRLLLSISLVILRMMLPPKLMPQAVVAARMFILGVILGALAWCTYFIMLKYPLLKIFYLCYPAVVYVLLFGFQSSPFLELNNSEAPPLHCCTHDPGQVRAEVEVLRHDFNMRVKKILFNSVSGAYYSSFIPCCFAQPYLYYEVYGASQQIAFVLGGLFGRYVSQLLGSAFCDVPHRAALHLGRWDPLPTDVSGEIPEWSEDKLWSAGARVRCGGAGYAAASPTVAARPGCPEHIRFHSVFINPSKLLCLLLSLHLSLIVLQLCLLFSSIPWHNFLSIVILLFINYYSLFKMVRDYLVAWKVYRAENIIQDKNNTISISN

Uniprot

H9JN96   A0A2W1BT13   A0A2A4J2Q9   A0A2H1X260   A0A3S2LX05   A0A194RE56   + More
A0A194PSC9   A0A212EW99   A0A3S2NH62   A0A069DUA2   A0A1B6GMH6   A0A0V0GBG5   A0A1B6L7U6   A0A067RFM6   R4FQQ7   A0A1B6JJ88   A0A0P4VXP7   A0A2J7QML0   A0A1B6JHU1   A0A0T6AZH4   A0A0A9WR21   A0A1B6DBM3   A0A1Y1LWL1   A0A1Y1LWK9   A0A2J7QMJ6   A0A2J7QML6   E0W313   A0A2P8YE59   T1IUB5   A0A0L7RGS0   E2BFC5   A0A232EEL4   K7J2P8   F4WS95   A0A151J4S6   A0A195BDX2   A0A158NIL5   A0A151XE61   A0A1Z5LFB7   A0A293LI94   A0A1Z5L2N0   Q16J13   A0A1S4FZI2   A0A0M8ZZ91   A0A1Q3F8U2   B0WTG1   A0A147BGI0   A0A1L8D8Y6   A0A195FMS5   A0A131Y125   A0A1B0CNR7   A0A1J1IXY4   A0A0L0C7M8   A0A1A9WIT3   A0A182L4V3   A0A087ZWZ0   T1HIC9   A0A182TE82   A0A182HHC6   A0A182XGQ9   Q7PZA7   A0A182VMJ5   A0A1A9ZGJ6   A0A151IP66   A0A1B0G7N3   A0A182W1W0   A0A210QB21   A0A1A9XP06   A0A182T8T3   A0A182K3Z9   A0A1A9V5E3   A0A182P6Y9   A0A182QMR0   A0A182R7F5   A0A026W0R0   A0A182NSZ0   A0A2A3ETS9   A0A182IZM4   A0A1S3JZD6   A0A2R5LGX8   A0A182M4T3   A0A182YL87   R7VJS2   A0A0K8WEV2   A0A1I8PZ26   A0A2M3ZCR8   A0A2M4ATG9   A0A2M4ASV4   N6T4V9   A0A1B0B7D1   A0A2M4BMK2   U4UAA5  

Pubmed

19121390    28756777    26354079    22118469    26334808    24845553    + More
27129103    25401762    26823975    28004739    20566863    29403074    20798317    28648823    20075255    21719571    21347285    28528879    17510324    29652888    26108605    20966253    12364791    14747013    17210077    28812685    24508170    30249741    25244985    23254933    23537049   

EMBL

BABH01033298    KZ149909    PZC78189.1    NWSH01003415    PCG66345.1    ODYU01012883    + More
SOQ59413.1    RSAL01000146    RVE45917.1    KQ460313    KPJ16113.1    KQ459595    KPI95873.1    AGBW02012034    OWR45772.1    RSAL01000102    RVE47440.1    GBGD01001602    JAC87287.1    GECZ01006131    JAS63638.1    GECL01000814    JAP05310.1    GEBQ01020195    JAT19782.1    KK852498    KDR22636.1    GAHY01000274    JAA77236.1    GECU01008438    JAS99268.1    GDKW01002228    JAI54367.1    NEVH01013205    PNF29816.1    GECU01008932    JAS98774.1    LJIG01022452    KRT80518.1    GBHO01036992    GBHO01033733    GBHO01033732    GBHO01033728    GBHO01033726    GBHO01033725    GBHO01023658    GBHO01020460    GBHO01020458    GBHO01013848    GBHO01013847    GDHC01021900    GDHC01010995    GDHC01002045    JAG06612.1    JAG09871.1    JAG09872.1    JAG09876.1    JAG09878.1    JAG09879.1    JAG19946.1    JAG23144.1    JAG23146.1    JAG29756.1    JAG29757.1    JAP96728.1    JAQ07634.1    JAQ16584.1    GEDC01014230    JAS23068.1    GEZM01045094    JAV77922.1    GEZM01045093    JAV77923.1    PNF29819.1    PNF29817.1    DS235881    EEB20019.1    PYGN01000667    PSN42547.1    JH431526    KQ414597    KOC69891.1    GL448009    EFN85585.1    NNAY01005290    OXU16783.1    GL888307    EGI62931.1    KQ980088    KYN17782.1    KQ976513    KYM82375.1    ADTU01016946    KQ982254    KYQ58538.1    GFJQ02000990    JAW05980.1    GFWV01003046    MAA27776.1    GFJQ02005699    JAW01271.1    CH478039    EAT34256.1    KQ435794    KOX73947.1    GFDL01011079    JAV23966.1    DS232085    EDS34399.1    GEGO01005507    JAR89897.1    GFDF01011163    JAV02921.1    KQ981430    KYN41701.1    GEFM01002613    JAP73183.1    AJWK01020706    CVRI01000063    CRL04578.1    JRES01000803    KNC28267.1    ACPB03009366    ACPB03009367    ACPB03009368    APCN01002406    AAAB01008986    EAA00383.3    KQ976891    KYN07256.1    CCAG010016887    NEDP02004373    OWF45929.1    AXCN02002128    KK107503    QOIP01000006    EZA49655.1    RLU21480.1    KZ288189    PBC34616.1    GGLE01004549    MBY08675.1    AXCM01003078    AMQN01004362    KB293301    ELU16155.1    GDHF01012463    GDHF01008603    GDHF01002616    JAI39851.1    JAI43711.1    JAI49698.1    GGFM01005551    MBW26302.1    GGFK01010557    MBW43878.1    GGFK01010538    MBW43859.1    APGK01052691    APGK01052692    APGK01052693    KB741213    ENN72663.1    JXJN01009550    GGFJ01005083    MBW54224.1    KB631874    ERL86875.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000027135    UP000235965    UP000009046    UP000245037    UP000053825    UP000008237    UP000215335    UP000002358    UP000007755    UP000078492    UP000078540    UP000005205    UP000075809    UP000008820    UP000053105    UP000002320    UP000078541    UP000092461    UP000183832    UP000037069    UP000091820    UP000075882    UP000005203    UP000015103    UP000075902    UP000075840    UP000076407    UP000007062    UP000075903    UP000092445    UP000078542    UP000092444    UP000075920    UP000242188    UP000092443    UP000075901    UP000075881    UP000078200    UP000075885    UP000075886    UP000075900    UP000053097    UP000279307    UP000075884    UP000242457    UP000075880    UP000085678    UP000075883    UP000076408    UP000014760    UP000095300    UP000019118    UP000092460    UP000030742   

PRIDE

H9JN96   

Pfam

PF10271   Tmp39

Interpro

IPR019397   Uncharacterised_TMEM39       

ProteinModelPortal

H9JN96   A0A2W1BT13   A0A2A4J2Q9   A0A2H1X260   A0A3S2LX05   A0A194RE56   + More
A0A194PSC9   A0A212EW99   A0A3S2NH62   A0A069DUA2   A0A1B6GMH6   A0A0V0GBG5   A0A1B6L7U6   A0A067RFM6   R4FQQ7   A0A1B6JJ88   A0A0P4VXP7   A0A2J7QML0   A0A1B6JHU1   A0A0T6AZH4   A0A0A9WR21   A0A1B6DBM3   A0A1Y1LWL1   A0A1Y1LWK9   A0A2J7QMJ6   A0A2J7QML6   E0W313   A0A2P8YE59   T1IUB5   A0A0L7RGS0   E2BFC5   A0A232EEL4   K7J2P8   F4WS95   A0A151J4S6   A0A195BDX2   A0A158NIL5   A0A151XE61   A0A1Z5LFB7   A0A293LI94   A0A1Z5L2N0   Q16J13   A0A1S4FZI2   A0A0M8ZZ91   A0A1Q3F8U2   B0WTG1   A0A147BGI0   A0A1L8D8Y6   A0A195FMS5   A0A131Y125   A0A1B0CNR7   A0A1J1IXY4   A0A0L0C7M8   A0A1A9WIT3   A0A182L4V3   A0A087ZWZ0   T1HIC9   A0A182TE82   A0A182HHC6   A0A182XGQ9   Q7PZA7   A0A182VMJ5   A0A1A9ZGJ6   A0A151IP66   A0A1B0G7N3   A0A182W1W0   A0A210QB21   A0A1A9XP06   A0A182T8T3   A0A182K3Z9   A0A1A9V5E3   A0A182P6Y9   A0A182QMR0   A0A182R7F5   A0A026W0R0   A0A182NSZ0   A0A2A3ETS9   A0A182IZM4   A0A1S3JZD6   A0A2R5LGX8   A0A182M4T3   A0A182YL87   R7VJS2   A0A0K8WEV2   A0A1I8PZ26   A0A2M3ZCR8   A0A2M4ATG9   A0A2M4ASV4   N6T4V9   A0A1B0B7D1   A0A2M4BMK2   U4UAA5  

KEGG

101742012    no KO assigned | (RefSeq) transmembrane protein 39A

GO

GO:0016021  

PANTHER

PTHR12995  

Length:

513

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

180.86705

Exp number, first 60 AAs:

20.38826

Total prob of N-in:

0.26438

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  138

TMhelix

139  -  161

outside

162  -  184

TMhelix

185  -  207

inside

208  -  219

TMhelix

220  -  242

outside

243  -  246

TMhelix

247  -  266

inside

267  -  309

TMhelix

310  -  332

outside

333  -  341

TMhelix

342  -  364

inside

365  -  439

TMhelix

440  -  459

outside

460  -  462

TMhelix

463  -  482

inside

483  -  513

 

 

Pi

269.170457

Theta

23.537526

Tajima's D

-2.560745

CLR

0.937735

CSRT

0.000249987500624969

Interpretation

Uncertain