Silkworm Genome Informatics Database

Gene

KWMTBOMO13580

Annotation

PREDICTED:_sine_oculis-binding_protein_homolog_[Bombyx_mori]

Location

Bomo_Chr23(-):2228314-2242234 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.324

CDS

ATGAACGAACTTCTTGGCTGGTACGGTTACGAGAGGCTGGAGCTTAGGAGGTGGGCCGCCTCGCGAGCAAAAGACGCTTCCAGCCCTGAACAATCTAATGAACAGAAGAATAAAGATGAATGTTCGTGGTGTAACAAAGGTATTACGAGCGAAAGCGGCGCGCTCCAACACGCGGGAGCAACCTTCTGCTCGGAATTGTGTTTCAGTCAATCCAGGAGGGCTAATTTCAAACGCGCCAAGACATGCGACTGGTGTCGGCACGTTAGACATACTGTTGCCTACGTAGACTTCCAGGATGGAGCTACGCAGCTACAGTTTTGTTCAGACAAGTGCCTCAATCAATACAAGATGCACATATTCTGTCGCGAGACACAGGCGCACCTAGACCTCAACCCGCACCTGGTCAACGCTTCGTCATCGTCCAATCTTATCACGCCAGAACTTTGGCTCAAGAACTGTAGAAGTCGCTCCGTGTCACCCGCCTCAGAACGTTCCGGATCTCCCAACCAAGAGCCCGCCAACAAAACGACTGAAAAGACGGACATCCAAAAGACATCAACTAGGAAATCGCCTTTGCCCTTGATAACCGTAGCGCCCACCGCGAAACTCATGAAGAAACGAATCGAAGAAATGGCTCCGACGCAGAAATCGCCGGAAACGAAGAAAGACGTTAGAAACAAAATGAACTTACGCAAACGCAGGACGTCGAAGTGTTCGGCCACCGTCACGTCTCAGACCGCGCGGCAGCGGACCGCGACGCCGAAAGCGCAAGACCTCCGAATGTGCAGCCCCTCGGAGGGCTCGTCGCCCGCTTCGATCACTAACGCGATACATTCGCCGCCGCACGCGATCAGCCAACACCCCGGACCGCCCCCTCCGCAGTTCCCGAACCCTATGTTCGGAATGCCACCCCCCATGTACGTCGACCACCACGACATCAGACACCAGAACATTTTCCCGCCGAGACTGAACTTTATGCCGCGACCTGGCTTCCCGATCCACCACGAGAGGCCCAGACTGCCGCCGCCCCTCAACTTCCCACCACCATTGGGGCAGGCGCCGCCTGTCACTGTTCTGGTGCCGTATCCGGTAGTTCTGCCCGTACCAATACCGATACCGATCCCAATTCCATTGACGTCCTTCATCCAGGCTCATTGCAATAATAAGGTTAAGACGGAAAGAGCTCCCGAAGATACAGAAGGTCCGTTAGATTTCACGATGAATAGCGGTAAGAGGAAAGAACAGTCCAACGGCCATAGTGAGCCCGCTGAAACAAACACGCCCAGAGCGCTCGATGAACAAAACGATGAATTCCATGAACGTATACTAACCGATGACAATAATCGAATGGAAATCGAAGATAACGAGACAGGAAACCCTGAGCAGACCCTACCAAAGTTTAAAATAACGAGACTTGGTAACAAAATGGCTAAGATCGTCACCAAGTCCAGAGAGCAGGCAGAATCCACGAGACCGCTGCGTAAAAGGCGAAGGCTCATGGAGGTACAGACTGATGACGAGGCTCTCATTCCTAAAACAAGGAAAATTGTGGAAGTGTAA

Protein

MNELLGWYGYERLELRRWAASRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQHAGATFCSELCFSQSRRANFKRAKTCDWCRHVRHTVAYVDFQDGATQLQFCSDKCLNQYKMHIFCRETQAHLDLNPHLVNASSSSNLITPELWLKNCRSRSVSPASERSGSPNQEPANKTTEKTDIQKTSTRKSPLPLITVAPTAKLMKKRIEEMAPTQKSPETKKDVRNKMNLRKRRTSKCSATVTSQTARQRTATPKAQDLRMCSPSEGSSPASITNAIHSPPHAISQHPGPPPPQFPNPMFGMPPPMYVDHHDIRHQNIFPPRLNFMPRPGFPIHHERPRLPPPLNFPPPLGQAPPVTVLVPYPVVLPVPIPIPIPIPLTSFIQAHCNNKVKTERAPEDTEGPLDFTMNSGKRKEQSNGHSEPAETNTPRALDEQNDEFHERILTDDNNRMEIEDNETGNPEQTLPKFKITRLGNKMAKIVTKSREQAESTRPLRKRRRLMEVQTDDEALIPKTRKIVEV

Similarity

Belongs to the glycosyltransferase 47 family.

Uniprot

A0A2H1WLY8 A0A2W1BY73 A0A2A4JMS5 A0A194PQZ9 A0A212EWB3 A0A194RFN7 + More
A0A0L7LHH4

Pubmed

28756777 26354079 22118469 26227816

EMBL

ODYU01009571 SOQ54091.1 KZ149909 PZC78187.1 NWSH01001086 PCG72700.1 + More
KQ459595 KPI95876.1 AGBW02012034 OWR45769.1 KQ460313 KPJ16110.1 JTDY01001107 KOB74860.1

Proteomes

UP000218220 UP000053268 UP000007151 UP000053240 UP000037510

Pfam

PF15279   SOBP        + More
PF03016   Exostosin
PF09258   Glyco_transf_64

Interpro

IPR026092   RAI2/SOBP        + More
IPR029044   Nucleotide-diphossugar_trans
IPR015338   GT64
IPR040911   Exostosin_GT47
IPR027673   Exostosin-2
IPR004263   Exostosin

SUPFAM

SSF53448 SSF53448

Gene 3D

3.90.550.10

ProteinModelPortal

A0A2H1WLY8 A0A2W1BY73 A0A2A4JMS5 A0A194PQZ9 A0A212EWB3 A0A194RFN7 + More
A0A0L7LHH4

KEGG

101745611 no KO assigned | (RefSeq) sine oculis-binding protein homolog

GO

GO:0015020 GO:0006486 GO:0006024 GO:0015012 GO:0016021

PANTHER

PTHR23186 PTHR11062:SF128 PTHR11062

Length:

519

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.24531

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00070

outside

1 - 519

Pi

300.718682

Theta

177.748224

Tajima's D

1.049063

CLR

0.748741

CSRT

0.676666166691665

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics