Silkworm Genome Informatics Database

Gene

KWMTBOMO13573

Pre Gene Modal

BGIBMGA010967

Annotation

PREDICTED:_uncharacterized_protein_LOC106137321_[Amyelois_transitella]

Location

Bomo_Chr23(-):1819378-1831285 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.638

CDS

ATGGGTTGTGGTTCTTCCGGCAACGTGGTTCCAAGTCAAGACGACTCTACTAATGACCAAGGGAAGATGGTGAACGGTAACGGTCACCACGATGACGACGATCTGCCTACCGTCGTCCTACCCGAATCTCCGATCAAGCCTAAGCCTCCAATAGCTTTTGAGATTCCAGTAGAAGAGTTCGACAGTAGCCGTCGGTCGTCAAACACGCCCCCAGCGCACCTACAACGGCTGCTTCAGCCGCCGCAGCCAGACATCACCCTTCCTGATATAGAAGAGAAACTCGCTGTGGCTGAACAAAGAAGACTATCTTTACTCCAACAGAGAGCCGCTTCAGCACAGAAAAGGACACAGAAGATGCTGCGCTCAGCTCATGCTGTGGACGCAACTAAAACTGAACTGGAGTCCACGGACATCAACAAACACGTCACGAACACTCTCACCATTCCTCCAGAGCCTGGTCTGCTCGAAGACAAGACCATCAGATAA

Protein

MGCGSSGNVVPSQDDSTNDQGKMVNGNGHHDDDDLPTVVLPESPIKPKPPIAFEIPVEEFDSSRRSSNTPPAHLQRLLQPPQPDITLPDIEEKLAVAEQRRLSLLQQRAASAQKRTQKMLRSAHAVDATKTELESTDINKHVTNTLTIPPEPGLLEDKTIR

Uniprot

H9JN64 A0A3S2LWK9 A0A2A4IYV5 A0A2W1BZA8 A0A194PSD9 A0A194RE49 + More
A0A212F4R9 A0A3Q0ISR0 A0A226ERJ5 B7P723 A0A336MXJ8 T1HU46 A0A336MA17 A0A2P8Y9I1 B4J4U0 A0A182MY93 A0A182QZ75 A0A182ITJ3 X1XPE0

Pubmed

19121390 28756777 26354079 22118469 29403074 17994087 + More

EMBL

BABH01033258 RSAL01000146 RVE45910.1 NWSH01004905 PCG64598.1 KZ149909 + More
PZC78180.1 KQ459595 KPI95883.1 KQ460313 KPJ16103.1 AGBW02010322 OWR48720.1 LNIX01000002 OXA59216.1 ABJB010144647 ABJB010251150 DS649146 EEC02395.1 UFQS01003354 UFQT01003354 SSX15534.1 SSX34900.1 ACPB03003096 ACPB03003097 ACPB03003098 UFQT01000782 SSX27194.1 PYGN01000779 PSN40917.1 CH916367 EDW00636.1 AXCN02002042 ABLF02031429

Proteomes

UP000005204 UP000283053 UP000218220 UP000053268 UP000053240 UP000007151 + More
UP000079169 UP000198287 UP000001555 UP000015103 UP000245037 UP000001070 UP000075884 UP000075886 UP000075880 UP000007819

PRIDE

H9JN64

Pfam

PF00836   Stathmin        + More
PF12349   Sterol-sensing
PF15398   DUF4619
PF00001   7tm_1

Interpro

IPR036002   Stathmin_sf        + More
IPR000956   Stathmin_fam
IPR030225   SCAP
IPR000731   SSD
IPR029235   DUF4619
IPR000276   GPCR_Rhodpsn
IPR017452   GPCR_Rhodpsn_7TM

SUPFAM

SSF101494 SSF101494

ProteinModelPortal

H9JN64 A0A3S2LWK9 A0A2A4IYV5 A0A2W1BZA8 A0A194PSD9 A0A194RE49 + More
A0A212F4R9 A0A3Q0ISR0 A0A226ERJ5 B7P723 A0A336MXJ8 T1HU46 A0A336MA17 A0A2P8Y9I1 B4J4U0 A0A182MY93 A0A182QZ75 A0A182ITJ3 X1XPE0

KEGG

101735524 K14353 solute carrier organic anion transporter family, member 3A | (RefSeq) solute carrier organic

GO

GO:0031110 GO:0016021 GO:0004930 GO:0007186 GO:0005887 GO:0016907 GO:0019538 GO:0030145 GO:0003676 GO:0016491 GO:0015930

PANTHER

PTHR46378 PTHR16065

Length:

161

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08944

outside

1 - 161

Pi

201.451087

Theta

165.72464

Tajima's D

1.380094

CLR

1.310863

CSRT

0.758162091895405

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics