Gene

KWMTBOMO13569  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010970

Annotation

ribosomal_protein_L26_[Bombyx_mori]

Location

Bomo_Chr23(-):1703182-1705385      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.963

CDS

ATGCCTATTCGCAAAGACGATGAAGTTCAGGTTGTACGTGGACACTACAAAGGCCAACAGGTTGGCAAAGTGATGCAGGTGTATCGTAAAAAGTTTGTTGTATACATTGAGAGGATTCAAAGAGAAAAGGCCAATGGTGCAACAGCATATGTCGGCATTCACCCTTCAAAGTGTGTGATTGTCAAGTTGAAGATGAATAAAGACCGCAAAGCAATCCTCGATCGCAGAGCAAAGGGCAGACTGGCTGCACTTGGCAAAGACAAGGGTAAATACACCGAGGAAACTGCCACAGCCATGGAGGCCTCTTAA

Protein

MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKYTEETATAMEAS

Uniprot

Q5UAR3   A0A0L7KWK0   D1LYJ9   I4DIT0   A0A2W1BY65   A0A2H1WUU5   + More
A0A2A4JJ82   E7DZ63   Q962T4   D5JAK8   A0A3G1T1Q7   G4XH96   Q5MGK7   S4NWM7   Q6F448   G0ZEI1   A0A212F7E1   A0A194RFM1   A0A194PXL5   D7EIP2   A0A222AJB1   A0A084WRD0   Q4GXD7   Q4GXD8   A0A2J7PCR1   A0A2P8Z2D4   A0A1W4X7Q3   Q4GXE1   A0A067RTV7   E0VIE9   A0A0A9Z0A0   Q4GXE0   D1M842   K7IWU5   A0A1D1XLS5   Q4GXD6   J3JTG3   A0A182XI11   A0A182HSZ2   A0A182V0G4   A0A182TDR1   A0A182LF27   Q7PQW7   A0A1Y1N2W9   A0A336LV37   A0A0P4VUI5   A0A0V0G5C1   R4G4E0   A0A224XN40   A0A069DW40   A6YPM9   R4WD21   A0A0X7YG01   I3VPG1   A0A2K6VBA5   A0A2M3ZF64   A0A2M3ZYF5   A0A182FT46   B6DDT5   A0A0P6JNH3   A0A0N0BJW4   A0A154P458   E2AAC2   A0A026WUZ9   F4WTD7   E9J5K3   A0A158NVT4   G8JKE2   A0A1L8EF68   A0A0C9QHI0   A0A182J6C4   A0A2A3E2P0   A0A088AEV2   E2C4P7   A0A0L7QKI5   A0A310SEU7   A0A1L8EF85   A0A1I8QB22   A0A1L8EFJ4   Q4GXE2   Q56FG3   A0A1L8EAE1   U4UDT8   N6TC77   A0A1A9WTR0   A0A1A9Z3D9   A0A1B0FM40   A0A0L0CCS8   A0A1A9XWJ1   A0A1A9VYL4   A0A1A9WFH1   T1P7S8   A0A0U2TJW4   A0A164VSA2   W8CEE6   E9H9X6   A0A0K8TXL0   A0A034WEQ6   B4IYD7   Q4GXD9  

Pubmed

19121390    26227816    22651552    28756777    14668217    16023793    + More
23622113    22118469    26354079    18362917    19820115    24438588    29403074    24845553    20566863    25401762    26823975    20075255    22516182    20966253    12364791    14747013    17210077    28004739    27129103    26334808    18207082    23691247    23049752    20920257    19178717    20798317    24508170    30249741    21719571    21282665    21347285    22679863    23537049    26108605    25315136    26621068    24495485    21292972    25348373    17994087   

EMBL

BABH01033248    AY769295    AAV34837.1    JTDY01005051    KOB67424.1    GU084273    + More
ACY95306.1    AK401198    BAM17820.1    KZ149909    PZC78177.1    ODYU01011195    SOQ56777.1    NWSH01001228    PCG72031.1    HQ424766    ADT80710.1    AF400190    AAK92162.1    GU235993    ADD91572.1    MG992455    AXY94893.1    JF811451    AEP43800.1    AY829779    AAV91393.1    GAIX01014550    JAA78010.1    AB180442    BAD26686.1    JF265059    AEL28890.1    AGBW02009884    OWR49650.1    KQ460313    KPJ16095.1    KQ459595    KPI95890.1    DS497684    EFA12204.1    KY609700    ASO76461.1    ATLV01026020    KE525405    KFB52774.1    AM049086    CAJ17386.1    AM049085    CAJ17385.1    NEVH01027057    PNF14126.1    PYGN01000227    PSN50656.1    AM049082    CAJ17321.1    KK852468    KDR23279.1    DS235199    EEB13155.1    GBHO01008369    GBRD01017073    GDHC01006013    JAG35235.1    JAG48754.1    JAQ12616.1    AM049083    CAJ17322.1    GU120466    ACY71316.1    AAZX01000576    GDJX01024593    JAT43343.1    AM049087    CAJ17387.1    BT126519    AEE61483.1    APCN01000376    AAAB01008859    EAA08173.4    GEZM01013992    JAV92233.1    UFQS01000219    UFQT01000219    SSX01532.1    SSX21912.1    GDKW01000903    JAI55692.1    GECL01003581    JAP02543.1    ACPB03005947    ACPB03005948    GAHY01000851    JAA76659.1    GFTR01002510    JAW13916.1    GBGD01003350    JAC85539.1    EF639040    GEMB01000162    ABR27925.1    JAS02951.1    AK417134    BAN20349.1    KC507349    AHB12472.1    JW050243    AFK82400.1    GGFM01006380    MBW27131.1    GGFK01000263    MBW33584.1    EU934295    ACI30073.1    GDIQ01002358    JAN92379.1    KQ435710    KOX79738.1    KQ434803    KZC06008.1    GL438076    EFN69610.1    KK107087    QOIP01000001    EZA59875.1    RLU27630.1    GL888334    EGI62529.1    GL768163    EFZ11897.1    ADTU01027489    JP593071    AER92456.1    GFDG01001468    JAV17331.1    GBYB01000032    JAG69799.1    KZ288422    PBC25977.1    GL452546    EFN77088.1    KQ414940    KOC59137.1    KQ780658    OAD51920.1    GFDG01001465    JAV17334.1    GFDG01001476    JAV17323.1    AM049081    CAJ17320.1    AY961537    AAX62439.1    GFDG01003098    JAV15701.1    KB632237    ERL90468.1    APGK01043587    KB741015    ENN75343.1    CCAG010023908    JRES01000558    KNC30243.1    KA644587    AFP59216.1    KT754639    ALS04473.1    LRGB01001361    KZS12604.1    GAMC01000331    JAC06225.1    GL732609    EFX71534.1    GDHF01033122    JAI19192.1    GAKP01006165    JAC52787.1    CH916366    EDV97610.1    AM049084    CAJ17323.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053240    UP000053268    + More
UP000007266    UP000030765    UP000235965    UP000245037    UP000192223    UP000027135    UP000009046    UP000002358    UP000076407    UP000075840    UP000075903    UP000075902    UP000075882    UP000007062    UP000015103    UP000069272    UP000053105    UP000076502    UP000000311    UP000053097    UP000279307    UP000007755    UP000005205    UP000075880    UP000242457    UP000005203    UP000008237    UP000053825    UP000095300    UP000030742    UP000019118    UP000091820    UP000092445    UP000092444    UP000037069    UP000092443    UP000078200    UP000095301    UP000076858    UP000000305    UP000001070   

PRIDE

Q5UAR3   

Pfam

PF00467   KOW        + More
PF16906   Ribosomal_L26

Interpro

IPR005756   Ribosomal_L26/L24P_euk/arc        + More
IPR014722   Rib_L2_dom2       
IPR041988   KOW_RPL26/RPL24       
IPR008991   Translation_prot_SH3-like_sf       
IPR005825   Ribosomal_L24/26_CS       
IPR005824   KOW       

SUPFAM

SSF50104   SSF50104       

Gene 3D

2.30.30.30    

CDD

cd06089  KOW_RPL26

ProteinModelPortal

Q5UAR3   A0A0L7KWK0   D1LYJ9   I4DIT0   A0A2W1BY65   A0A2H1WUU5   + More
A0A2A4JJ82   E7DZ63   Q962T4   D5JAK8   A0A3G1T1Q7   G4XH96   Q5MGK7   S4NWM7   Q6F448   G0ZEI1   A0A212F7E1   A0A194RFM1   A0A194PXL5   D7EIP2   A0A222AJB1   A0A084WRD0   Q4GXD7   Q4GXD8   A0A2J7PCR1   A0A2P8Z2D4   A0A1W4X7Q3   Q4GXE1   A0A067RTV7   E0VIE9   A0A0A9Z0A0   Q4GXE0   D1M842   K7IWU5   A0A1D1XLS5   Q4GXD6   J3JTG3   A0A182XI11   A0A182HSZ2   A0A182V0G4   A0A182TDR1   A0A182LF27   Q7PQW7   A0A1Y1N2W9   A0A336LV37   A0A0P4VUI5   A0A0V0G5C1   R4G4E0   A0A224XN40   A0A069DW40   A6YPM9   R4WD21   A0A0X7YG01   I3VPG1   A0A2K6VBA5   A0A2M3ZF64   A0A2M3ZYF5   A0A182FT46   B6DDT5   A0A0P6JNH3   A0A0N0BJW4   A0A154P458   E2AAC2   A0A026WUZ9   F4WTD7   E9J5K3   A0A158NVT4   G8JKE2   A0A1L8EF68   A0A0C9QHI0   A0A182J6C4   A0A2A3E2P0   A0A088AEV2   E2C4P7   A0A0L7QKI5   A0A310SEU7   A0A1L8EF85   A0A1I8QB22   A0A1L8EFJ4   Q4GXE2   Q56FG3   A0A1L8EAE1   U4UDT8   N6TC77   A0A1A9WTR0   A0A1A9Z3D9   A0A1B0FM40   A0A0L0CCS8   A0A1A9XWJ1   A0A1A9VYL4   A0A1A9WFH1   T1P7S8   A0A0U2TJW4   A0A164VSA2   W8CEE6   E9H9X6   A0A0K8TXL0   A0A034WEQ6   B4IYD7   Q4GXD9  

PDB

4V6W     E-value=8.56664e-34,     Score=352

KEGG

692702    K02898 large subunit ribosomal protein L26e | (RefSeq) RpL26; ribosomal protein L26

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0006412   GO:0003735   GO:0015934   GO:0005840   GO:0003723   GO:0022625   GO:0042273   GO:0002181   GO:0005622   GO:0019538   GO:0030145   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR11143  

Length:

102

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01027

Exp number, first 60 AAs:

0.0089

Total prob of N-in:

0.39788

outside

1  -  102

 

 

Pi

222.309998

Theta

171.935901

Tajima's D

0.133004

CLR

0.928287

CSRT

0.408379581020949

Interpretation

Uncertain