Gene

KWMTBOMO13565

Pre Gene Modal

BGIBMGA014562

Annotation

PREDICTED:_potassium_channel_subfamily_K_member_1-like_[Amyelois_transitella]

Location

Bomo_Chr23(+):1652776-1672567      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.656

CDS

ATGCCGAGCTATTCGCGTATTCAGTCGTACGGGAGCTTGTGTTCGGGTAGAAGCGAAGACGATATGACAGTTCACAGCCAACTGTACCCCTACCCGAAGAAAATGGTCGTCGAAAGAGAGATACTGTACGAAGAAGAGAATCCGCCTTTTCAGCCGCTGTTCGCCACCACCAGAATCTTCGGGCAAGCGAGATTCACTTGTCTAATATTGTTCTACGTTCTGTTCTATGGTACTTATCTGGTGTCCGGTGCTTTGGTGTTTTCGGCTTTGGAAGCGCCGATTGAGAATCAAATAAGGCTCGACTTGATCAGAGCGAAACAGGATTTTCTGGTGCGTCATCCGGATGTATTAGATGACGATTTGGAGTCGTTATTGGACGAGGTCGTCCGCGCCAGCAACCACGGAGTCTCAGCCTCCCGCAACGTCACCGGCGGACCTAACTGGAGCTTCGGCCAGTCCTTGTTCTTTTCATCTACTGTCGTCACCACTATTGGTTACGGCCACGTGACCCCGCTCTCACAGCCTGGCAAGTTGTTCTGCATGATTTACGCTCTGCTGGGCATACCGCTGACTCTGGTGCTGCTCTCAGCGCTGGTGGAGCGGTTACTGCTGCCCGCCACCGCCCTCCTGCGCTCACTGAATGCTGCCCTGGGCCATTTGTACCGGCCTTTCACGATTCGTCTTGTGCATCTTACCATTATAGTGACCACATTCCTCGTATTCTTCCTGGTCGTACCGGCTGGAATATTCGCGTACCTAGAACCGGAATGGGACTTCCTGGATTCGTTTTACTACTGCTTCATATCGCTGACGACAGTAGGCCTCGGGGACTACATCCCGGGCGACTCCCCCGGACAACCATACCGGCCTTTCTACAAAATCGCTACTATTTTCTACTTAATAACCGGGCTGACGTTCTTGATGCTGACCCTGACTGTGTTCTACGACATCCCCCAACTGAACTTGAGCAGCGTTTTCTCGTCCATCAAACTGGACGAGGACCCCGAGAAGATGCGGCTGAGCGGTTCCGGCGCGATGGGTCCCGGCTACGGGCTGGGCGGGCTGGTCATGCGCGACGAGTACTCGCGCCACGAGCAGCGCCGCTCCGTCGTGCACATCCGCCCGCGCCCCGACGACAGCCCCAGCCCCGACGACACCACGCCCGTGCACGCCCGGGACGTGCGACTCCCCTGA

Protein

MPSYSRIQSYGSLCSGRSEDDMTVHSQLYPYPKKMVVEREILYEEENPPFQPLFATTRIFGQARFTCLILFYVLFYGTYLVSGALVFSALEAPIENQIRLDLIRAKQDFLVRHPDVLDDDLESLLDEVVRASNHGVSASRNVTGGPNWSFGQSLFFSSTVVTTIGYGHVTPLSQPGKLFCMIYALLGIPLTLVLLSALVERLLLPATALLRSLNAALGHLYRPFTIRLVHLTIIVTTFLVFFLVVPAGIFAYLEPEWDFLDSFYYCFISLTTVGLGDYIPGDSPGQPYRPFYKIATIFYLITGLTFLMLTLTVFYDIPQLNLSSVFSSIKLDEDPEKMRLSGSGAMGPGYGLGGLVMRDEYSRHEQRRSVVHIRPRPDDSPSPDDTTPVHARDVRLP

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.

Uniprot

A0A2A4JJT3   A0A2W1C232   A0A212FEG0   A0A3S2MAA5   A0A194PR18   A0A194RJH5   + More
A0A224XG49   A0A023F4B6   V5I901   A0A0A9Z982   A0A146LEN1   A0A1B6FUL3   A0A1B6DQ39   A0A1B6J5K6   A0A1W4X9H8   A0A1B6K8J2   A0A2S1ZB03   D6WAV5   A0A1B6C3L8   A0A2S2QJ11   E9HIP1   A0A162R4T3   J9JTQ9   A0A2S2PS53   A0A2H8TGF6   A0A0P6BC40   K7PB98   A0A0P6IIR1   A0A0P5UHH9   A0A1I8Q5I6   A0A1B0CHN0   A0A3S1B0F7   W8BL01   W8B8S4   A0A0K8V4F9   A0A131YYI6   W8BWP0   A0A224YW85   A0A0K8VGI2   A0A0K2UHC4   L7MHI2   A0A1I8Q5K3   A0A034W431   A0A0B7B090   A0A1E1X770   A0A0B7B0R8   L7LZY8   A0A131XB67   A0A131YZ97   A0A224YW81   T1JN22  

Pubmed

28756777    22118469    26354079    25474469    25401762    26823975    + More
18362917    19820115    21292972    24495485    26830274    28797301    25576852    25348373    28503490    28049606   

EMBL

NWSH01001228    PCG72036.1    KZ149909    PZC78173.1    AGBW02008933    OWR52139.1    + More
RSAL01000002    RVE55026.1    RVE55079.1    KQ459595    KPI95896.1    KQ460313    KPJ16091.1    GFTR01004969    JAW11457.1    GBBI01002720    JAC15992.1    GALX01003795    JAB64671.1    GBHO01001782    JAG41822.1    GDHC01011905    JAQ06724.1    GECZ01032256    GECZ01026067    GECZ01015857    JAS37513.1    JAS43702.1    JAS53912.1    GEDC01009510    JAS27788.1    GECU01013269    JAS94437.1    GEBQ01032225    JAT07752.1    MF373403    AWK21957.1    KQ971312    EEZ97944.1    GEDC01029468    JAS07830.1    GGMS01008523    MBY77726.1    GL732656    EFX68386.1    LRGB01000243    KZS20231.1    ABLF02037546    GGMR01019614    MBY32233.1    GFXV01000563    MBW12368.1    GDIP01031350    JAM72365.1    JQ743205    AFI81250.1    GDIQ01005545    JAN89192.1    GDIP01117038    JAL86676.1    AJWK01012530    AJWK01012531    AJWK01012532    AJWK01012533    AJWK01012534    RQTK01000627    RUS76878.1    GAMC01008887    JAB97668.1    GAMC01008885    JAB97670.1    GDHF01018512    JAI33802.1    GEDV01005012    JAP83545.1    GAMC01008888    GAMC01008886    GAMC01008884    JAB97671.1    GFPF01010721    MAA21867.1    GDHF01034005    GDHF01025647    GDHF01014664    JAI18309.1    JAI26667.1    JAI37650.1    HACA01020298    CDW37659.1    GACK01002301    JAA62733.1    GAKP01010078    GAKP01010075    GAKP01010073    GAKP01010072    JAC48880.1    HACG01038856    CEK85721.1    GFAC01004124    JAT95064.1    HACG01038855    CEK85720.1    GACK01007877    JAA57157.1    GEFH01004422    JAP64159.1    GEDV01005011    JAP83546.1    GFPF01010720    MAA21866.1    JH432211   

Proteomes

UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    UP000192223    + More
UP000007266    UP000000305    UP000076858    UP000007819    UP000095300    UP000092461    UP000271974   

Pfam

PF07885   Ion_trans_2

Interpro

IPR003280   2pore_dom_K_chnl        + More
IPR001779   2pore_dom_K_chnl_TWIK1       
IPR003092   2pore_dom_K_chnl_TASK       
IPR013099   K_chnl_dom       
IPR005408   2pore_dom_K_chnl_TWIK       
IPR005409   2pore_dom_K_chnl_TWIK2       

ProteinModelPortal

A0A2A4JJT3   A0A2W1C232   A0A212FEG0   A0A3S2MAA5   A0A194PR18   A0A194RJH5   + More
A0A224XG49   A0A023F4B6   V5I901   A0A0A9Z982   A0A146LEN1   A0A1B6FUL3   A0A1B6DQ39   A0A1B6J5K6   A0A1W4X9H8   A0A1B6K8J2   A0A2S1ZB03   D6WAV5   A0A1B6C3L8   A0A2S2QJ11   E9HIP1   A0A162R4T3   J9JTQ9   A0A2S2PS53   A0A2H8TGF6   A0A0P6BC40   K7PB98   A0A0P6IIR1   A0A0P5UHH9   A0A1I8Q5I6   A0A1B0CHN0   A0A3S1B0F7   W8BL01   W8B8S4   A0A0K8V4F9   A0A131YYI6   W8BWP0   A0A224YW85   A0A0K8VGI2   A0A0K2UHC4   L7MHI2   A0A1I8Q5K3   A0A034W431   A0A0B7B090   A0A1E1X770   A0A0B7B0R8   L7LZY8   A0A131XB67   A0A131YZ97   A0A224YW81   T1JN22  

PDB

3UKM     E-value=8.16457e-40,     Score=411

KEGG

101739708    K04912 potassium channel subfamily K member 1 | (RefSeq) potassium channel subfamily K member 1-like

GO

GO:0005267   GO:0016021   GO:0022841   GO:0071805   GO:0005887   GO:0030322   GO:0006811   GO:0016020   GO:0005737   GO:0008235   GO:0019538   GO:0030145   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR11003:SF28  

Subcellular location

Membrane  

Length:

397

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

125.2571

Exp number, first 60 AAs:

0.00768

Total prob of N-in:

0.92505

inside

1  -  67

TMhelix

68  -  90

outside

91  -  147

TMhelix

148  -  170

inside

171  -  181

TMhelix

182  -  204

outside

205  -  227

TMhelix

228  -  250

inside

251  -  262

TMhelix

263  -  280

outside

281  -  294

TMhelix

295  -  317

inside

318  -  397

 

 

Pi

218.0266

Theta

181.291902

Tajima's D

1.144347

CLR

0.609416

CSRT

0.695165241737913

Interpretation

Uncertain