SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13564
Annotation
PREDICTED:_uncharacterized_protein_LOC106136784_[Amyelois_transitella]
Location
Bomo_Chr23(-):1625063-1629955      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.256
 

Sequence

CDS
ATGCCGATCACCAGGAGCAACAAGGGATCATCGAGGGAACAGCCACTCGAACCTGCGGTTCAAGAATCCAGTCCGGAGGCAACAGAAGCGTACGAAACATACGAGAGCTCCGCGACCGGTACGACCCAGAACACAAAACTTGAAGAGGCAACGACGCGGACACGTGGTAAAAATAGACCCGCGTCGAAGAAATCGCTACGACGTAAGGAACTGGCAGCGAGAGCGGAGCTGGCGGAAAAAGAATTGATAGAAGCACAAGCAGCCACCATAGCCGCCAGACTCCGCCTGCAATTGATTCAGGCCGAAAGCGAAGACGACGATGATTCCATTATAGAAGAGCCAAAGGACCGGGAGGACCAGGTCAGGGCCTGGGTCCAGACGTCGGCGGGCAGTATGGACAAGGAGCCCGCAGGCGAGCACATTGAGAACCACCCCGTCAGCAAGGCCAACATGGAAGATTGCAGCAACAGGGACCTGGCTGAGGCGATAGTGGAAGCGGTGAGGAGCGCAACGACCAAGGAGCTGCCACCACAACCCGACTACATGCACCAGTTGCCGACGTTCGAAGGCGACTGCAGGGAGTGGGTGGCCTTCAAGGCTGTCTACGAGGATACCGCTCCACTCTTCTCAAGCGCTCAAAACATGGCGCGGCTGAGAAGAGCGCTGAAAGGACAAGCCAGGGAAGGAGTTCGCAGCCAGCTGTACTCCGAGAGCACACCGGAGGAAGTAATGGAATCACTGCGGCGGTGCTATGGAAGGGCGGACGCTTTAGTCTTAGCGGAGCTAGACCGCATACGAAGACTTCCGACTATAAGCGACTCCGCCTACGACATTTGCTCACTGGCGAGCAATGTTAACAATACCGTCGCAGCGATCAGGGGGCTGCGGAAACCCCAATATTTGATGTCGCCCGAACTCCTGAAGAGCATCGTCGACAAGATGCCGACCATCCTGAGGTTCCGGTGGTACGATCACATTATCGAAAAGACTGAAGGAGACCCGGACCTCAACACGATGTGCGGCTTCCTAAACAAGATGGCGGACCGGTGCGGGCCACACGCCGTGGCTGAAGTAGCAACGAAAAGACAACCATCGAGGCGACAGGCGACGCACGCCACAACCGACTGCACCGAGCGCGCAACTTCGGACAGAGTAATAATAGACAAGCCGGCGTGCCCGCAGTGCAATGAAGGGCACCCACTGTACGATTGTCCGAGGTACGAGAGAGCTACGGTGCAGGAACGATGGAGAATGGCAAAGGAGTCGCGCCTGTGTTACAAGTGCCTCGACGGTAAGCACCGGAAGCAATCATGTCAACGACCGCCATGCCGCACGTGCAAGCGCTGGCATCACCACTCGCTACACAACGAGAAGCCGGAGACAGAGCCAGCAGAGAACAGGGAAGTCGCGAACAACGTGCGACTTCCCATCAACTGCACACGGATCAGCAGGGCGTACTTGAAGATGGTGCCCGTTGAAGTGTACGGGCCGTCGGGATCGACGACGGTGCTGGCCCTGCTGGACGAAGGCTCCACGGTAACTCTCCTGGACTCGAGCGTGGCGAAGCAGATCGGCCTGAAGGGACCCAAAGAGATGCTCCGCCTCGAGACCGTGGGCGGGAAGACCCTAGCGAAGAAGGACTCGATGAAGCTTAACATCCGAGTTCGAGGGCTTCACCAGCGGCAGAAGAGGACGATCTTCGGAGCGCGCACAATGGACGACATGAGCCTTGCACCCCAGCGATTGAAAAGAGAGACCATCGAAGGCTACGCGCACCTGAGGAGCCTAGCGGACCAGTTAAATTACGAAGAACAATCCCCCAAACTATTGATTGGGCAGGACAACTGGGGACTCATCGCCGCCAAGACGACGCGCAGGGGCAAGAGGAACCAGCCGGTAGCCTCATTCACCCAATTGGGATGGGTGCTACATGGTCTCGACGGCAACAACGCAAAAGAGGTCAACTTCCTCACCTGCGCCCATGTATCGATGCGCGAAGAGGCCTTGGACAGACTGGTGAAGGAGCACATCGCAATAGAGTCGCACCCAAGCGTCCGAGCACGGATATGGAGGCGAAGGCTCGTCGCGGTTGTCGCGGACATCAAGGAGAGGTTCCTGCAGATAAGGATCAGGGACGAGGACCGCGACAGCCTGAGATTCCTCTATAGAGAAGATCGACGCGAGGCCGCTTCAAAAGAGTATAGAATGACGTCGGTCATATTCGGAGCGGCCTTTTCAACGAGCGCGGCGCTGTTCGTTACAAATAAGAATGCCAAGGAGTACAAACATCGTGCTAATAGAAGGGAAAGCGCTCATTCAGAGCATTTGGCGGAGCGAGATCGACTGGGACGACGTCATCCTGGAAAAGGACGAGGTGGCGTGGAAACGCTACATGGAGAACCTCCGCACGTTGCAAGGCCTCCGATAGCAAGGTGCTTCTCGTGCTGCAACACTGAGGGGGAGCTGCACACGTTCACCGACGCCAGCGAGAAGGCCTACGCGTGTGCAGTCTATTGGCGTCAGAGGACAGACGAGAGCACCTACCGCGTCACGCTTCTAGCAGGGAGAGCCAGGGTGACCCCACTGAGACCAGTCTCTATCCCAAGGCTGGAGCTGCAAGTTGCACTGCTGGGGACAAGGATGGCACAGGCGATAGCGGACGAATTGGACATCGCGGTCGGTGGAAGGACGTACTGGTCTGACTCCAGCACAGTCCTGACATGGATAAAGACCGACCCACGCACGTTCAAACCTTTCGTCGCGCACCGACTCGCCGAGATAGAAGAGTCAACGAAGCCCCAAGAATGGCGATGGGTGCCTGGCTCGCAGAACCCAGCGGACGACGCAACTAGAGAGGCGCCGGCGGATTTCGACCACACGCATCGGTGGTTTAATGGACCCGAGTTCCTGTCGTGGGATGAATCGCGCTGGCCCAAGCCGCGAACCTTCAAGCAAGAACCGTCTGGAGAAGAGAAAGAGGCCTACCTGGTCGCTACAGCGAGGACCGCTGACGCTCAACCCACGCCCGATCCGCACAGATTCTCGAGCTGGGTCAGGTTATTGAGAGCAACAGCCAGGGTCCTCCAATTTATCGAGCTGTGTCGACCCCGGAAGGAGAGCGCCTGCGTGTCCAGACAATCGAAGCAGCAAGATCCCACGTGGAGGACGACACGAACGAAGCAACCCCGATCCACATGGAAGTTAAGGACCCCGGAAGCACCTACAGAAGCATGGCTGCCGCTTGATCCGCCCCACTTGAAGAAGGCGGAGAAGATCCTACTGAGAAGCAGCCAAGGAGAGAGCTTCGGTGAAAAAGATCCCGAACGTCACCCCAAGTTGCGACGGCTCGACGTCGTGATGGAAGATGGCCTGTTGCGCCTGCGCGGACGTATCGACGCAGCGCAATACATAGATGCAGGCTGCAAGCGACCGATCGTGCTGGACGGGAAGCACGTGATAGCGAGATTATTGATCAAACACTATCACGAGGCGTTCCAGCACGGTAACCACGCAACGGTGATGAACGAGGTGCGGCAGCGCTACTGGATCCTGGGTCTAAGATCGACCATTCGAGCGACGGCCGTCCGATGCCAGTGGTGCAAGGTCTATCGGAGTACACCACGACTACCGCCCACCGGAGACCTGCCGATAGAGCGGCTACGACATGGAGAGCCGCCGTTCACCTGTGCTGCCGTCGATTACTTCGGGCCCATGACGGTGACTGTAGGACGACGTCACGAGAAGAGGTGGGGTGTGCTGTTCACATGCCTCACCACGAGAGCAGTCCACATGGAGCTAGCAGCGTCACTGACGGCAGACTCAATGCTGTTAGCGCTGCGCAGGATGGCCGCCCGACGAGGAATGCCCAAAGTCATTTACAGCGACAATGGGACTAACTTCGTCGGCGCTAACAAGGAGCTCAAGCAGGCGATCGAGAACGCGAGGGAAACAGACGTCATGTCACGGGCCGCTCAGATGAACATAAAATGGAAGTTCATCCCGCCAGGAGCGCCGAACATGGGAGGCGCGTGGGAACGTTTGGTGCGGTCCGTGAAGACCGCGCTGGTGGTCACACTGAAGGAAAGACACCCGAGGGAAGAAGTTCTGCACACTCTTCTGTTGGAGGCGGAGCACGTCGTCAACTCGCGACCGCTCGTCGCCAGGGAAGAGAGTTGGGAGTCAGAAGCACTCACGCCGAACCACTTCCTCATAGGGAGGTCTTGCGGAGCTCCGCGAATCGGCGACTACACAGAAGAAGACCTGACCGGCAAAAGGACATGGAGAGTGGCGCAGCGTATGGCGGACCACTTCTGGAGTAGAACGAGCGGCGGTCTGCTTAAGAGACCTGCCTCCAAGATGATCCTGCTGATGCCTGCAACGAGCGACGAGCCCACGCCCATAGAGTCGCCACGACAAGGAGTCGGTGCTACGCACGAGGGGGAGGATGTTGGCGACAGCGGCGTCGCCCCATAA
Protein
MPITRSNKGSSREQPLEPAVQESSPEATEAYETYESSATGTTQNTKLEEATTRTRGKNRPASKKSLRRKELAARAELAEKELIEAQAATIAARLRLQLIQAESEDDDDSIIEEPKDREDQVRAWVQTSAGSMDKEPAGEHIENHPVSKANMEDCSNRDLAEAIVEAVRSATTKELPPQPDYMHQLPTFEGDCREWVAFKAVYEDTAPLFSSAQNMARLRRALKGQAREGVRSQLYSESTPEEVMESLRRCYGRADALVLAELDRIRRLPTISDSAYDICSLASNVNNTVAAIRGLRKPQYLMSPELLKSIVDKMPTILRFRWYDHIIEKTEGDPDLNTMCGFLNKMADRCGPHAVAEVATKRQPSRRQATHATTDCTERATSDRVIIDKPACPQCNEGHPLYDCPRYERATVQERWRMAKESRLCYKCLDGKHRKQSCQRPPCRTCKRWHHHSLHNEKPETEPAENREVANNVRLPINCTRISRAYLKMVPVEVYGPSGSTTVLALLDEGSTVTLLDSSVAKQIGLKGPKEMLRLETVGGKTLAKKDSMKLNIRVRGLHQRQKRTIFGARTMDDMSLAPQRLKRETIEGYAHLRSLADQLNYEEQSPKLLIGQDNWGLIAAKTTRRGKRNQPVASFTQLGWVLHGLDGNNAKEVNFLTCAHVSMREEALDRLVKEHIAIESHPSVRARIWRRRLVAVVADIKERFLQIRIRDEDRDSLRFLYREDRREAASKEYRMTSVIFGAAFSTSAALFVTNKNAKEYKHRANRRESAHSEHLAERDRLGRRHPGKGRGGVETLHGEPPHVARPPIARCFSCCNTEGELHTFTDASEKAYACAVYWRQRTDESTYRVTLLAGRARVTPLRPVSIPRLELQVALLGTRMAQAIADELDIAVGGRTYWSDSSTVLTWIKTDPRTFKPFVAHRLAEIEESTKPQEWRWVPGSQNPADDATREAPADFDHTHRWFNGPEFLSWDESRWPKPRTFKQEPSGEEKEAYLVATARTADAQPTPDPHRFSSWVRLLRATARVLQFIELCRPRKESACVSRQSKQQDPTWRTTRTKQPRSTWKLRTPEAPTEAWLPLDPPHLKKAEKILLRSSQGESFGEKDPERHPKLRRLDVVMEDGLLRLRGRIDAAQYIDAGCKRPIVLDGKHVIARLLIKHYHEAFQHGNHATVMNEVRQRYWILGLRSTIRATAVRCQWCKVYRSTPRLPPTGDLPIERLRHGEPPFTCAAVDYFGPMTVTVGRRHEKRWGVLFTCLTTRAVHMELAASLTADSMLLALRRMAARRGMPKVIYSDNGTNFVGANKELKQAIENARETDVMSRAAQMNIKWKFIPPGAPNMGGAWERLVRSVKTALVVTLKERHPREEVLHTLLLEAEHVVNSRPLVAREESWESEALTPNHFLIGRSCGAPRIGDYTEEDLTGKRTWRVAQRMADHFWSRTSGGLLKRPASKMILLMPATSDEPTPIESPRQGVGATHEGEDVGDSGVAP

Summary

Uniprot
NA  
ProteinModelPortal
NA  

Ontologies

KEGG
105841459    no KO assigned | (RefSeq) uncharacterized LOC105841459
GO
GO:0015074   GO:0003676   GO:0043565   GO:0005737   GO:0008235   GO:0019538   GO:0030145   GO:0016491   GO:0015930  

Topology

Length:
1490
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03351
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00011
outside
1  -  1490
 
 

Population Genetic Test Statistics

Pi
410.145068
Theta
192.505905
Tajima's D
3.194621
CLR
0.449564
CSRT
0.986250687465627
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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