Gene

KWMTBOMO13562

Pre Gene Modal

BGIBMGA010974

Annotation

PREDICTED:_pleiotropic_regulator_1_[Amyelois_transitella]

Location

Bomo_Chr23(-):1597411-1601575      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.725

CDS

ATGTCTGAGGACGTGATTAAACATTCTGTACACACTTTAGTGTTTCGATCGTTGAAAAGATCGCACGATATGTTCCTAGCTAATCAAGGAATGTTGCCGCCAATCGACGATAAAGCAGAGAAAGTACTGAAATTGGTTAAAGCAAGAGATAGTTACGGACAAGTCATGGGTGCAGTGCGGAAGGCTCAGGCCCTGAAACAACAAGAGTCTGTCACCTGTAGACCTGAAACTCCACTGACCACAGCAGAAACAGTGGAAACTGCACCTTTGCCGTCGGAAGGGGCTGTTGTCCCATACTCTGGACCAACACCTTCACCGTCACCAGCTCCCCCCTCGGGGGCTTTAACTGTACCACGGAAACCGCCGTCTATGCCCAAACCAAAATGGCACCCACCCTGGAAATTAATGCGTGTTATATCAGGTCATCTGGGTTGGGTTCGATGTGTTGCTGTAGAACCTGGAAATGAGTGGTTTGCTACCGGTGCCGCTGACAGAGTGATAAAAGTATGGGATTTAGCAAGTGGGAAACTAAAAGTATCTCTCACTGGACATGTGAGTACAGTAAGAGGAGTGGTAGTGTCACCAAGACATCCATATTTATTCAGCTGCGGTGAGGACAGACAGGTGAAGTGCTGGGACTTAGAATATAACAAAGTGATCCGGCAGTACCACGGTCACCTGTCGGCCGTGGTGTGTCTGGCGCTGCACCCGCGCCTCGACGTGCTGGTGTCGGCCGGCCGCGACGGCACCGCGCGCGTGTGGGACGTGCGCAGCAAGGCCAACGTGCACACGCTCGCCGCGCACACCGACACCGTCGCCTCGCTCGCCTGCCAGGCCGCCGAGCCGCAGATAATAACCGGCTCGCACGACTCGACCATCCGTCTCTGGGACCTGGCGGCCGGCAAGTCCGTGTGCACGCTGACCAACCACAAGAAGTCCGTTCGCGCGATCGTGATACACCCGACAATGTACACGTTCGCGTCGGCCTCGCCCGATAACATCAAACAGTGGAAATGTCCCGAAGGAAAATTTATACAAAACCTGTCTGGTCACAACGCAATAGTGAACTGTCTGGCCGTAAACCCCGAGGGCGTGCTGGTGAGCGGCGGCGACAACGGCACCATGTACTGCTGGGACTGGAGGACCGGCTACAACTTCCAGAGGTTGCAGACGGCGGTGCAGCCCGGCTCCATGGACTCGGAGGCCGGCATCTTCGCCATGAGCTTCGACCAGTCCGGCTCCCGCCTCATCACCGCCGAGGCCGACAAGACCATCAAGATCTACAAGGAGGACGAGGCGGCCTCGGAGGAGACTCACCCGGTCAACTGGCGACCGGAAATATTGAAGAGGCGAAAGTTTTAG

Protein

MSEDVIKHSVHTLVFRSLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKAQALKQQESVTCRPETPLTTAETVETAPLPSEGAVVPYSGPTPSPSPAPPSGALTVPRKPPSMPKPKWHPPWKLMRVISGHLGWVRCVAVEPGNEWFATGAADRVIKVWDLASGKLKVSLTGHVSTVRGVVVSPRHPYLFSCGEDRQVKCWDLEYNKVIRQYHGHLSAVVCLALHPRLDVLVSAGRDGTARVWDVRSKANVHTLAAHTDTVASLACQAAEPQIITGSHDSTIRLWDLAAGKSVCTLTNHKKSVRAIVIHPTMYTFASASPDNIKQWKCPEGKFIQNLSGHNAIVNCLAVNPEGVLVSGGDNGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIYKEDEAASEETHPVNWRPEILKRRKF

Similarity

Belongs to the AAA ATPase family.

Uniprot

H9JN71   S4NNS5   A0A3S2PLS5   A0A2H1X283   A0A194PT09   A0A2W1BZ96   + More
A0A2A4JRK6   A0A212EXI4   A0A1B6GJR1   A0A1W4WWA7   D6WA47   A0A1B6HRP6   A0A1B6KTX6   A0A2J7RIX3   A0A2P8XK40   A0A067R4X3   R4WQ33   A0A1Y1K8R6   J3JX71   A0A0P4VW94   A0A0A9WTF4   B0WC91   A0A1B6E7Z4   A0A1B0FQL8   A0A1A9VA04   A0A1Q3F123   A0A1B0AIT8   T1HSL0   A0A023FCV6   A0A2M4AQZ3   E0VRY1   A0A1L8DH82   U5EXM0   A0A0V0G8I7   A0A1S4FQR3   A0A182Y188   A0A182FDN4   A0A0L0CKF9   D3TQT5   A0A1A9WBV8   W5JG53   A0A1B0C436   A0A182J805   Q16SH0   A0A182NGU8   A0A1I8NA58   A0A1A9X8A2   A0A1B0DR81   A0A182PHK9   A0A182Q8G9   A0A182WB38   A0A1J1HMA7   A0A0A1WRK1   A0A084W9Z1   A0A182LTY6   Q7PNR1   B4MG83   A0A182RF81   A0A182XMY4   A0A182V779   A0A2A3E4H0   A0A182JV77   A0A182LJ60   A0A182HWT8   B3MXT2   A0A0K8UJU3   A0A034WME8   A0A182U7D0   A0A088A075   A0A1W4VW93   A0A336K8G0   Q9VYQ9   F4WFC0   B4L5P1   B4PY91   A0A195EM12   B4NCQ3   B4R3L2   A0A1B0CUV6   A0A069DUN3   A0A195BXL2   E9ILL8   B3NXM3   W8CDB6   A0A1I8PZ40   B4JNB7   U4UJ49   A0A3B0JQ98   B4ILB0   Q29HL9   B4GXG8   A0A0M4FB74   A0A0B4J2K9   A0A2H8TPL2   A0A2S2PYI4   A0A2S2PBJ2   A0A0N7ZCZ3   A0A0J7KVF6   A0A0C9R0F8   A0A026WZG2  

Pubmed

19121390    23622113    26354079    28756777    22118469    18362917    + More
19820115    29403074    24845553    23691247    28004739    22516182    27129103    25401762    26823975    25474469    20566863    25244985    26108605    20353571    20920257    23761445    17510324    25315136    25830018    24438588    12364791    14747013    17210077    17994087    20966253    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21719571    17550304    26334808    21282665    24495485    23537049    15632085    24508170   

EMBL

BABH01033232    GAIX01013821    JAA78739.1    RSAL01000002    RVE55029.1    RVE55082.1    + More
ODYU01012448    SOQ58754.1    KQ459595    KPI95899.1    KZ149909    PZC78170.1    NWSH01000820    PCG74042.1    AGBW02011749    OWR46195.1    GECZ01007138    JAS62631.1    KQ971312    EEZ98586.1    GECU01030358    JAS77348.1    GEBQ01025080    JAT14897.1    NEVH01003023    PNF40770.1    PYGN01001878    PSN32363.1    KK852747    KDR17250.1    AK417801    BAN21016.1    GEZM01088993    GEZM01088992    GEZM01088991    GEZM01088990    GEZM01088989    GEZM01088988    GEZM01088985    GEZM01088984    GEZM01088983    GEZM01088979    GEZM01088978    GEZM01088977    GEZM01088976    GEZM01088975    GEZM01088973    GEZM01088971    JAV57793.1    BT127839    AEE62801.1    GDKW01000217    JAI56378.1    GBHO01031862    GBRD01016995    GDHC01003180    JAG11742.1    JAG48832.1    JAQ15449.1    DS231886    EDS43336.1    GEDC01013501    GEDC01003248    JAS23797.1    JAS34050.1    CCAG010002563    GFDL01013793    JAV21252.1    ACPB03006764    GBBI01000208    JAC18504.1    GGFK01009869    MBW43190.1    DS235634    EEB16137.1    GFDF01008364    JAV05720.1    GANO01000887    JAB58984.1    GECL01001951    JAP04173.1    JRES01000279    KNC32750.1    EZ423787    ADD20063.1    ADMH02001494    ETN62318.1    JXJN01025268    CH477673    EAT37429.1    AJVK01008962    AXCN02000366    CVRI01000004    CRK87361.1    GBXI01013224    JAD01068.1    ATLV01021973    KE525326    KFB47035.1    AXCM01000869    AAAB01008960    EAA11740.4    CH940672    EDW57406.1    KZ288379    PBC26627.1    APCN01001538    CH902630    EDV38547.1    GDHF01025531    JAI26783.1    GAKP01003128    JAC55824.1    UFQS01000124    UFQT01000124    SSX00102.1    SSX20482.1    AE014298    AY051707    AAF48133.1    AAK93131.1    GL888115    EGI67171.1    CH933811    EDW06500.1    CM000162    EDX00964.1    KQ978691    KYN29253.1    CH964239    EDW82612.1    CM000366    EDX17714.1    AJWK01029688    AJWK01029689    GBGD01001368    JAC87521.1    KQ976396    KYM93035.1    GL764129    EFZ18459.1    CH954180    EDV47324.1    GAMC01002231    JAC04325.1    CH916371    EDV92210.1    KB632379    ERL94099.1    OUUW01000003    SPP77640.1    CH480868    EDW53756.1    CH379064    EAL31739.1    CH479196    EDW27445.1    CP012528    ALC49807.1    ABLF02024322    GFXV01004144    MBW15949.1    GGMS01001402    MBY70605.1    GGMR01014145    MBY26764.1    GDRN01056544    JAI65808.1    LBMM01002849    KMQ94286.1    GBYB01006422    JAG76189.1    KK107054    EZA61460.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000218220    UP000007151    UP000192223    + More
UP000007266    UP000235965    UP000245037    UP000027135    UP000002320    UP000092444    UP000078200    UP000092445    UP000015103    UP000009046    UP000076408    UP000069272    UP000037069    UP000091820    UP000000673    UP000092460    UP000075880    UP000008820    UP000075884    UP000095301    UP000092443    UP000092462    UP000075885    UP000075886    UP000075920    UP000183832    UP000030765    UP000075883    UP000007062    UP000008792    UP000075900    UP000076407    UP000075903    UP000242457    UP000075881    UP000075882    UP000075840    UP000007801    UP000075902    UP000005203    UP000192221    UP000000803    UP000007755    UP000009192    UP000002282    UP000078492    UP000007798    UP000000304    UP000092461    UP000078540    UP000008711    UP000095300    UP000001070    UP000030742    UP000268350    UP000001292    UP000001819    UP000008744    UP000092553    UP000007819    UP000036403    UP000053097   

PRIDE

H9JN71    Q9VYQ9   

Pfam

PF00400   WD40        + More
PF17862   AAA_lid_3
PF02359   CDC48_N
PF00004   AAA
PF09336   Vps4_C
PF02933   CDC48_2
PF00557   Peptidase_M24

Interpro

IPR017986   WD40_repeat_dom        + More
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
IPR015415   Vps4_C       
IPR003338   CDC4_N-term_subdom       
IPR003959   ATPase_AAA_core       
IPR005938   AAA_ATPase_CDC48       
IPR029067   CDC48_domain_2-like_sf       
IPR009010   Asp_de-COase-like_dom_sf       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR004201   Cdc48_dom2       
IPR041569   AAA_lid_3       
IPR003593   AAA+_ATPase       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR004545   PA2G4       
IPR036005   Creatinase/aminopeptidase-like       
IPR000994   Pept_M24       

SUPFAM

SSF50978   SSF50978        + More
SSF52540   SSF52540       
SSF54585   SSF54585       
SSF50692   SSF50692       
SSF46785   SSF46785       
SSF55920   SSF55920       

Gene 3D

2.130.10.10     1.10.10.10    

ProteinModelPortal

H9JN71   S4NNS5   A0A3S2PLS5   A0A2H1X283   A0A194PT09   A0A2W1BZ96   + More
A0A2A4JRK6   A0A212EXI4   A0A1B6GJR1   A0A1W4WWA7   D6WA47   A0A1B6HRP6   A0A1B6KTX6   A0A2J7RIX3   A0A2P8XK40   A0A067R4X3   R4WQ33   A0A1Y1K8R6   J3JX71   A0A0P4VW94   A0A0A9WTF4   B0WC91   A0A1B6E7Z4   A0A1B0FQL8   A0A1A9VA04   A0A1Q3F123   A0A1B0AIT8   T1HSL0   A0A023FCV6   A0A2M4AQZ3   E0VRY1   A0A1L8DH82   U5EXM0   A0A0V0G8I7   A0A1S4FQR3   A0A182Y188   A0A182FDN4   A0A0L0CKF9   D3TQT5   A0A1A9WBV8   W5JG53   A0A1B0C436   A0A182J805   Q16SH0   A0A182NGU8   A0A1I8NA58   A0A1A9X8A2   A0A1B0DR81   A0A182PHK9   A0A182Q8G9   A0A182WB38   A0A1J1HMA7   A0A0A1WRK1   A0A084W9Z1   A0A182LTY6   Q7PNR1   B4MG83   A0A182RF81   A0A182XMY4   A0A182V779   A0A2A3E4H0   A0A182JV77   A0A182LJ60   A0A182HWT8   B3MXT2   A0A0K8UJU3   A0A034WME8   A0A182U7D0   A0A088A075   A0A1W4VW93   A0A336K8G0   Q9VYQ9   F4WFC0   B4L5P1   B4PY91   A0A195EM12   B4NCQ3   B4R3L2   A0A1B0CUV6   A0A069DUN3   A0A195BXL2   E9ILL8   B3NXM3   W8CDB6   A0A1I8PZ40   B4JNB7   U4UJ49   A0A3B0JQ98   B4ILB0   Q29HL9   B4GXG8   A0A0M4FB74   A0A0B4J2K9   A0A2H8TPL2   A0A2S2PYI4   A0A2S2PBJ2   A0A0N7ZCZ3   A0A0J7KVF6   A0A0C9R0F8   A0A026WZG2  

PDB

6ID1     E-value=2.14967e-152,     Score=1383

KEGG

101740677    K12862 pleiotropic regulator 1 | (RefSeq) pleiotropic regulator 1

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

GO:0071013   GO:0080008   GO:0000974   GO:0000398   GO:0016905   GO:0005524   GO:0016787   GO:0007030   GO:0005829   GO:0009306   GO:0071011   GO:0005515   GO:0003676   GO:0043565   GO:0005737   GO:0008235   GO:0019538   GO:0030145   GO:0016491   GO:0015930  

Length:

453

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00341000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01027

outside

1  -  453

 

 

Pi

274.364853

Theta

217.10794

Tajima's D

0.837766

CLR

0

CSRT

0.615219239038048

Interpretation

Uncertain