Gene

KWMTBOMO13558  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010975

Annotation

PREDICTED:_protein_FRG1_homolog_[Amyelois_transitella]

Location

Bomo_Chr23(-):1560531-1562135      View in EpiBrowser

Full name

Protein FRG1 homolog      

Location in the cell

Nuclear   Reliability : 2.469

CDS

ATGACTGATGAATATGCTGCTGTGAAACGTGGAAAGTTAGTTCTTAAAGGAGACAAACCCAAAGCAAAAAAACGCAAGCACAAGAAGAAGGATAAATCGGATGACTCCAAAGTTGATGAGGATTTACTAAAACATGGAGGGTGGTGGCGGATCGATATAGTCGAAGACATAACAGGATCTGTATCAATAGAATTTGGGAATAATTGCTACGTATCAGCATTGGATAATGGGTTATTTACAATTGGAAGTCCTCATGGTGATGGTGAAGGGCCTTCCCCAGAAGAAATCTTCACAGCTTTCCCTGCAGGAGAAAACAAATTTGCTTTGAAATCAGGGTATGGAAAATACTTGGGGGTTTCAAAGGATGGAGTGGTGGTGGGCAGATCTGATGCAGTAGGGCCAATGGAACAGTGGGAGCCTGTTTGGCAAGATGGTAAAACTGCAATACTGAGCTCCTTAAACAAATTCATGTCTGTAACGCCTGATGATGACAGTGTTATAGCTAAGAGTGTCAGTGCCGGTGAGAATGAGTACTGTATAATACGGAGTAATAAAGCCAAGGAAGTAAATAAAGCAGTGTTGCCTGCAGAAGAAGAGGGCAACTTAAATGAAGTTGAAGTTAATTATGTGAAAAAATTCCAGAAGTTTCAAGACAAGAAATTACGGTTGAATGATGGTAGTGTTACAGAGTTGAAACGTGCCAAAATTGAGGGTAATCTCCACGAGACACTGCTTGACAGGAGAAGTAAAATGAAAGCTGATAGATATTGTAAATAG

Protein

MTDEYAAVKRGKLVLKGDKPKAKKRKHKKKDKSDDSKVDEDLLKHGGWWRIDIVEDITGSVSIEFGNNCYVSALDNGLFTIGSPHGDGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNKAVLPAEEEGNLNEVEVNYVKKFQKFQDKKLRLNDGSVTELKRAKIEGNLHETLLDRRSKMKADRYCK

Description

May have a role in processing of pre-rRNA or in the assembly of rRNA into ribosomal subunits (By similarity). May be involved in epigenetic regulation of muscle differentiation through regulation of the activity of the histone-lysine N-methyltransferase Suv4-20.

Similarity

Belongs to the FRG1 family.

Keywords

Complete proteome   Cytoplasm   Myogenesis   Nucleus   Reference proteome   Ribosome biogenesis   rRNA processing  

Feature

chain  Protein FRG1 homolog

Uniprot

H9JN72   A0A2H1W657   A0A1E1WR22   A0A2W1BC31   A0A2A4IZN4   A0A3S2P8L5   + More
A0A2W1BY56   S4P3E9   A0A212EXG7   A0A194QFK8   A0A067R844   E2B5Y2   F4WBU2   A0A154PNZ6   A0A195C4Y7   A0A026WP63   A0A195BEC8   A0A158NW87   A0A2J7QQI4   E9IG48   A0A195FSL4   A0A151WNF0   A0A0L7QNM1   A0A2R7WL27   A0A1B6C643   A0A195DI50   B4MLL5   A0A0C9QQK2   A0A232ERS9   K7IYC3   A0A1B6LVN5   A0A0P6EUB6   A0A1B6JQD2   A0A1B6F6L3   E9GIK3   A0A1Y1L0E4   D7EJW1   A0A088A1I4   A0A2A3EHM0   B3M4R6   A0A194RFF3   A0A2S2P5N3   Q2M0V8   B4GR11   A0A2H8TIW4   A0A1W4W779   B3NE61   A0A3B0JRF7   C4WVV9   B4IA73   Q9VWA8   A0A2R5L915   B4QRW2   A0A3Q2PBE2   A0A224XW36   A0A0K8TUK4   A0A1B0CJC5   R4G5F3   A0A1I8PM10   T1IFL2   A0A0L0BQ88   A0A1I8MR27   A0A1B0FJH8   A0A0N0U2Y8   A0A1A9Z304   A0A1A9UQS9   A0A0P6A6A2   A0A1A9XQU4   A0A1B0B3M6   B4KYZ5   B4LD60   A0A0S7I0D5   A0A034WKS4   A0A3P8RW08   A0A3Q1FCN8   A0A3Q1BVZ1   A0A1L8E5Y6   A0A293M320   A0A3Q2CRB4   A0A0P4WAT9   A0A3Q2CRL7   A0A3Q1I467   J3JTA3   A0A087XLX2   A0A3B3X9J1   A0A3Q1IBS5   A0A0L7LC90   A0A3Q2VLY3   A0A0A9WF50   A0A3P9BJ56   A0A3Q2WPD7   A0A3P8RGG3   A0A3P9BK13   A0A3P9MRW1   Q4SRX8   A0A3B5PX65   B4IYE6   A0A0A1X0S7   A0A3B4YT33   A0A0M4EH27  

Pubmed

19121390    28756777    23622113    22118469    26354079    24845553    + More
20798317    21719571    24508170    30249741    21347285    21282665    17994087    28648823    20075255    21292972    28004739    18362917    19820115    15632085    10731132    12537572    23720823    22936249    26369729    26108605    25315136    25348373    22516182    23537049    26227816    25401762    26823975    25186727    15496914    23542700    25830018   

EMBL

BABH01033228    ODYU01006282    SOQ47984.1    GDQN01001758    JAT89296.1    KZ150435    + More
PZC70877.1    NWSH01004709    PCG64734.1    RSAL01000002    RVE55032.1    RVE55085.1    KZ149909    PZC78167.1    GAIX01009537    JAA83023.1    AGBW02011749    OWR46192.1    KQ459144    KPJ03730.1    KK852818    KDR15716.1    GL445887    EFN88951.1    GL888066    EGI68370.1    KQ434978    KZC12978.1    KQ978317    KYM95223.1    KK107154    QOIP01000001    EZA56889.1    RLU27187.1    KQ976511    KYM82520.1    ADTU01027850    NEVH01012087    PNF30848.1    GL762910    EFZ20454.1    KQ981280    KYN43453.1    KQ982911    KYQ49321.1    KQ414851    KOC60218.1    KK854922    PTY19700.1    GEDC01028529    JAS08769.1    KQ980824    KYN12570.1    CH963847    EDW72871.1    GBYB01002927    JAG72694.1    NNAY01002553    OXU21068.1    GEBQ01012287    JAT27690.1    GDIP01100211    GDIQ01071262    LRGB01000568    JAM03504.1    JAN23475.1    KZS18107.1    GECU01037754    GECU01006404    JAS69952.1    JAT01303.1    GECZ01023939    JAS45830.1    GL732546    EFX80739.1    GEZM01068158    GEZM01068157    GEZM01068156    GEZM01068155    GEZM01068154    JAV67132.1    DS497720    EFA12887.1    KZ288241    PBC31275.1    CH902618    EDV39465.1    KQ460313    KPJ16030.1    GGMR01012043    MBY24662.1    CH379069    EAL30818.1    CH479188    EDW40196.1    GFXV01001827    MBW13632.1    CH954178    EDV52485.1    OUUW01000009    SPP84725.1    ABLF02039783    AK341701    BAH72029.1    CH480826    EDW44186.1    AE014296    BT023262    GGLE01001868    MBY05994.1    CM000363    CM002912    EDX11208.1    KMZ00731.1    GFTR01004255    JAW12171.1    GDAI01000008    JAI17595.1    AJWK01014477    GAHY01000615    JAA76895.1    ACPB03005782    JRES01001542    KNC22148.1    CCAG010003291    KQ435971    KOX67778.1    GDIP01034205    JAM69510.1    JXJN01007906    CH933809    EDW18887.1    CH940647    EDW69941.1    GBYX01434689    JAO46640.1    GAKP01003980    JAC54972.1    GFDF01000162    JAV13922.1    GFWV01010405    MAA35134.1    GDRN01057165    JAI65726.1    APGK01053953    BT126459    KB741239    KB632275    AEE61423.1    ENN72160.1    ERL91129.1    AYCK01003559    JTDY01001749    KOB73000.1    GBHO01036537    GBHO01036536    GBRD01016319    GDHC01002876    GDHC01000847    JAG07067.1    JAG07068.1    JAG49507.1    JAQ15753.1    JAQ17782.1    CAAE01014485    CAF96604.1    CH916366    EDV97619.1    GBXI01009358    JAD04934.1    CP012525    ALC43827.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000027135    + More
UP000008237    UP000007755    UP000076502    UP000078542    UP000053097    UP000279307    UP000078540    UP000005205    UP000235965    UP000078541    UP000075809    UP000053825    UP000078492    UP000007798    UP000215335    UP000002358    UP000076858    UP000000305    UP000007266    UP000005203    UP000242457    UP000007801    UP000053240    UP000001819    UP000008744    UP000192221    UP000008711    UP000268350    UP000007819    UP000001292    UP000000803    UP000000304    UP000265000    UP000092461    UP000095300    UP000015103    UP000037069    UP000095301    UP000092444    UP000053105    UP000092445    UP000078200    UP000092443    UP000092460    UP000009192    UP000008792    UP000265080    UP000257200    UP000257160    UP000265020    UP000265040    UP000019118    UP000030742    UP000028760    UP000261480    UP000037510    UP000264840    UP000265160    UP000265100    UP000242638    UP000007303    UP000002852    UP000001070    UP000261360    UP000092553   

PRIDE

H9JN72    Q9VWA8   

Pfam

PF06229   FRG1

Interpro

IPR008999   Actin-crosslinking        + More
IPR010414   FRG1       

SUPFAM

SSF50405   SSF50405       

ProteinModelPortal

H9JN72   A0A2H1W657   A0A1E1WR22   A0A2W1BC31   A0A2A4IZN4   A0A3S2P8L5   + More
A0A2W1BY56   S4P3E9   A0A212EXG7   A0A194QFK8   A0A067R844   E2B5Y2   F4WBU2   A0A154PNZ6   A0A195C4Y7   A0A026WP63   A0A195BEC8   A0A158NW87   A0A2J7QQI4   E9IG48   A0A195FSL4   A0A151WNF0   A0A0L7QNM1   A0A2R7WL27   A0A1B6C643   A0A195DI50   B4MLL5   A0A0C9QQK2   A0A232ERS9   K7IYC3   A0A1B6LVN5   A0A0P6EUB6   A0A1B6JQD2   A0A1B6F6L3   E9GIK3   A0A1Y1L0E4   D7EJW1   A0A088A1I4   A0A2A3EHM0   B3M4R6   A0A194RFF3   A0A2S2P5N3   Q2M0V8   B4GR11   A0A2H8TIW4   A0A1W4W779   B3NE61   A0A3B0JRF7   C4WVV9   B4IA73   Q9VWA8   A0A2R5L915   B4QRW2   A0A3Q2PBE2   A0A224XW36   A0A0K8TUK4   A0A1B0CJC5   R4G5F3   A0A1I8PM10   T1IFL2   A0A0L0BQ88   A0A1I8MR27   A0A1B0FJH8   A0A0N0U2Y8   A0A1A9Z304   A0A1A9UQS9   A0A0P6A6A2   A0A1A9XQU4   A0A1B0B3M6   B4KYZ5   B4LD60   A0A0S7I0D5   A0A034WKS4   A0A3P8RW08   A0A3Q1FCN8   A0A3Q1BVZ1   A0A1L8E5Y6   A0A293M320   A0A3Q2CRB4   A0A0P4WAT9   A0A3Q2CRL7   A0A3Q1I467   J3JTA3   A0A087XLX2   A0A3B3X9J1   A0A3Q1IBS5   A0A0L7LC90   A0A3Q2VLY3   A0A0A9WF50   A0A3P9BJ56   A0A3Q2WPD7   A0A3P8RGG3   A0A3P9BK13   A0A3P9MRW1   Q4SRX8   A0A3B5PX65   B4IYE6   A0A0A1X0S7   A0A3B4YT33   A0A0M4EH27  

PDB

2YUG     E-value=3.49599e-35,     Score=369

KEGG

101740319    K13122 protein FRG1 | (RefSeq) protein FRG1 homolog

GO

GO:0070511   GO:0005737   GO:0031936   GO:0051015   GO:0071013   GO:0005730   GO:0055120   GO:0007517   GO:0030018   GO:0006364   GO:0015030   GO:0016021  

PANTHER

PTHR12928  

Subcellular location

Nucleus  
Cajal body  
Nucleolus  
Cytoplasm  
Myofibril  
Sarcomere  
Z line  

Length:

258

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000670000000000001

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.33492

outside

1  -  258

 

 

Pi

262.309193

Theta

210.94805

Tajima's D

0.766543

CLR

0

CSRT

0.598670066496675

Interpretation

Uncertain