SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13552
Pre Gene Modal
BGIBMGA010977
Annotation
PREDICTED:_basic_salivary_proline-rich_protein_1-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.381 Nuclear   Reliability : 1.965
 

Sequence

CDS
ATGAAGTTTCTTATTGTTATATTGATCGTCGCCGGTGTCTACGCTGAGCTGCCTCGCTACAGACCTGCGAGGTTCAGACTCCAGCGTCAGGAATTGGCACCCACCACGACAGATTCACCGACGGAAGCCACTACTGAACCATCAGGGCCGTATCCAGCATCTGGATGGAAACCCACCGGGGCACCTTTCACACTACCCAACGAAACTCCCACTGATAGCTACGGACCACCTGAAGAAACTGCCGACCAAAGCGGGCCATACCCACCGTCGGGATGGAAACCTGACGGGCCTGTTTTTGTGTTACCGAAACAGCAATCGCCTCCAGCAACCAGCTACGGAGTACCGGACAACGCCTATGGAGCACCGGCAACCGATGCTCCCACGACTGACAACCCTCAGGCTGAAAGGTTGGAGGGTCCAGTGGAGGTGCAAAAGAGTGTTGGTTCATACTTCGTTTTGTTACCCAACGGACAGCTGCAGAGGGTGGAATTCATGACGGAGAATGACATTCAGAATATGAAGTATTCCGCCAGACTACAGTTCAGGGAGCCAGCGCCCTTGATTGTCTTCAGACCTTGA
Protein
MKFLIVILIVAGVYAELPRYRPARFRLQRQELAPTTTDSPTEATTEPSGPYPASGWKPTGAPFTLPNETPTDSYGPPEETADQSGPYPPSGWKPDGPVFVLPKQQSPPATSYGVPDNAYGAPATDAPTTDNPQAERLEGPVEVQKSVGSYFVLLPNGQLQRVEFMTENDIQNMKYSARLQFREPAPLIVFRP

Summary

Pfam
PF16042   DUF4794        + More
PF00379   Chitin_bind_4
Interpro
IPR032011   DUF4794        + More
IPR031311   CHIT_BIND_RR_consensus       
IPR000618   Insect_cuticle       

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.994957
 
 
Length:
192
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.15866
Exp number, first 60 AAs:
1.15856
Total prob of N-in:
0.06422
outside
1  -  192
 
 

Population Genetic Test Statistics

Pi
26.446645
Theta
26.250888
Tajima's D
0.604729
CLR
2.620508
CSRT
0.549922503874806
Interpretation
Uncertain
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