SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13544
Pre Gene Modal
BGIBMGA010981
Annotation
PREDICTED:_uncharacterized_protein_LOC105841535_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.565
 

Sequence

CDS
ATGCTGTCGTTAATATACCTAGCGTGTTTAGTGCCAGCGTTCGCTTTGACGGATATCGACATAAAGTGCATGGCTAATAATGAAGAGCATCTATCGAACGACAGGCTCCTGGGCACTTGGTACATAATGTACACCTTCTCATTTATGGGCGGCGTCATACCCACGACCGCTTGTACCAACATCACAATCACGAAACCGACTGCCGAAGACTTGCAGCTGTTCAAAGACGAATACCTGGCCCCTGGCCTCCCGTACTCGTTTGAAGACAACCCTGTACTGTCTACCAAGGGTCAAGAAAACGGCATGCTGATAGGAAACAATAGAGCCAAATTCTATGTTCTCAAACCTAATGACGGATTTTTAAATCCATTTGGATACGAAGTGCAAGCTTACCAGTTCTTGACCGAGAAATTCGTGATGCATACTCCGTGTCCGCTGAGGGGAAACCGTAGGATGCTTTTGTCCAACGACAGACATGCAACGGTCGAGGAAATGGAGCGAGTGATCAAGAATACACGCGAATTAAACATTCTTGAGAGGAACAGATTTTGTGCTTAA
Protein
MLSLIYLACLVPAFALTDIDIKCMANNEEHLSNDRLLGTWYIMYTFSFMGGVIPTTACTNITITKPTAEDLQLFKDEYLAPGLPYSFEDNPVLSTKGQENGMLIGNNRAKFYVLKPNDGFLNPFGYEVQAYQFLTEKFVMHTPCPLRGNRRMLLSNDRHATVEEMERVIKNTRELNILERNRFCA

Summary

Interpro
IPR012674   Calycin       
SUPFAM
SSF50814   SSF50814       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.957095
 
 
Length:
185
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
29.18703
Exp number, first 60 AAs:
28.53823
Total prob of N-in:
0.59553
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  21
outside
22  -  35
TMhelix
36  -  58
inside
59  -  185
 
 

Population Genetic Test Statistics

Pi
128.100278
Theta
127.359808
Tajima's D
0.01826
CLR
7.769359
CSRT
0.371431428428579
Interpretation
Uncertain
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