Gene

KWMTBOMO13543

Pre Gene Modal

BGIBMGA010982

Annotation

PREDICTED:_uncharacterized_protein_LOC105841534_[Bombyx_mori]

Location

Bomo_Chr23(+):1024441-1047154      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.048 PlasmaMembrane   Reliability : 2.116

CDS

ATGCTACATAGAACTTCATCTTCAAGACGACGTAGGGCGTCAAGAAGTGCCGCCACATCGCCGCAGACAAGATCACCAAGAAACTCAGCTCTACCCTCCAGACGTGCTTCACTAGCTACAGCAGAAACTGACGAGGAAATGGAACCAACTCCTCAAAGAAGTCCAAGAGCTAGTCTCGCACCAGACGCAATCATGGACTACCACAGAAGCCCGCGTCATTCTTTAACACCCGAAGTCAGATCAGCGCGGAATTCCATAACGCCTGACACAGCAATGCCGATGAGAAACAGTCTCGCGCCGTCCAGAAACAATTTAGGTGTCGATCTTAATTACGGTTCGAGGTTAAGTCTGAATCCTCAAGATTTCAACCGGAGCCCTAGAAATAGTATCACTCCTGACGTGTCAGCTAGAAGCCCGCGAAGAAGCTTGGTGCCTGAAGGTACATTATGGAACCAGCCCAGGAATTCGCTGGTGCCCGATGTGGGAAGAAGTCCAAGGCATTCCGTGGCCAGCATCCAGTTAGATCCAGCACGCGCTCAAAAGGATTTAGGTCCTAGTCCACGAACGAGCCCTCGTGGGAGTGTCGGTCCTGACTTAAATTTGAAAAAAGAAGAAATAAACAGAACTCACAGAGGATCCTTGATTCCGGACTCGCAGAGGAGTCCGAGAGGTAGTATTGCTCCCTCTGAAAGAAGTGCTAGAGGTAGTCTTGTGGCAATTGAAAATGAAGCTGCAAGAGTTAGTCCCAGAGGTAGTCTTACATTGACATTTCAAGAGCCTTTGGTATCGAAAGAAAGAAGACCCAGCGAAGACAGCCAGGCTGCAGGTAAAGGAAGAAGCGTGTCTCCGTACAGAGCGTCATTCGGCGGACGACAGAGCGGCACTGGAGCTCTGTCAGATACTGGGTCTCGAAGGGCATCTAGCTCCGTCAGTCAGGTCTCAGGAGATGAGCAACGAAGGTTATGCGGAGAGCAGGCAAAATACAACGAGAGAGTTGGACTGGGTCTTGGCGTGGGGCTCACGACGTATGGATCTGTGGCTTATCAGCTCAAAGACGCTAACATGGAAGCTTCTGGCACTATGGACTTCGTCTGTCGGGCCGCTAAGATTATGAATAGAACTATTCTGATGACAGTGTTCCTAGCTTGCTTATCTACTTTGCCCGTCATCATGCTTATCATGGGAGTACAATACATCAGGGACTGCCCAGCCGAGCCTCGTATTCCAGTGTACATGGTCGTGGGGGGCGCTGCAGGTGGAGCGGGTATCTGCTGGCTTCTGTGGGCTCAGCTGGCCAGCAGGAACTCCAACTCATCGGCGAGCGTACCGGAGACTATCCTCGCGTACACTCTCACCGTCTTCTTGATGGGCTGGTTTGCGTGCGGAAACTACTGGACCCTGGACATAATGTGGCCCGACTATTCCCCGACGCTCTTCGAACCAAACCAGTGGTGTCACAAGACCCTGTACGTGTTCGCGCTGACCCAGCTTGGTGTTGTATGGGGCGTGTTGGCTTTTATAGTCCTCTTACTTCTGGCTTTAGTCATCTGCCAGGTATTCGGCTGCGGCTGGCTGGGCCCGCCTCGCTACAAGTAG

Protein

MLHRTSSSRRRRASRSAATSPQTRSPRNSALPSRRASLATAETDEEMEPTPQRSPRASLAPDAIMDYHRSPRHSLTPEVRSARNSITPDTAMPMRNSLAPSRNNLGVDLNYGSRLSLNPQDFNRSPRNSITPDVSARSPRRSLVPEGTLWNQPRNSLVPDVGRSPRHSVASIQLDPARAQKDLGPSPRTSPRGSVGPDLNLKKEEINRTHRGSLIPDSQRSPRGSIAPSERSARGSLVAIENEAARVSPRGSLTLTFQEPLVSKERRPSEDSQAAGKGRSVSPYRASFGGRQSGTGALSDTGSRRASSSVSQVSGDEQRRLCGEQAKYNERVGLGLGVGLTTYGSVAYQLKDANMEASGTMDFVCRAAKIMNRTILMTVFLACLSTLPVIMLIMGVQYIRDCPAEPRIPVYMVVGGAAGGAGICWLLWAQLASRNSNSSASVPETILAYTLTVFLMGWFACGNYWTLDIMWPDYSPTLFEPNQWCHKTLYVFALTQLGVVWGVLAFIVLLLLALVICQVFGCGWLGPPRYK

Uniprot

A0A194RDX7   A0A194PT53   A0A212F4E3   A0A2A4K1T3   A0A2W1BPL6   A0A2H1WUF6   + More
A0A3S2LW99   A0A139WNZ9   A0A1Y1LRF3   A0A139WNH2   D2CG22   A0A067R154   A0A0C9RST5   A0A3L8D6E4   A0A026W7U0   A0A195D205   F4WL09   A0A2P8ZAY1   A0A158NZM4   A0A195B5F6   E2BZK2   A0A151WLV3   A0A1B6CCN4   A0A2S2N6Q0   A0A232EW36   A0A151IWA0   A0A088AVA0   A0A195FBG1   E2AGR4   A0A0K8SWH7   A0A154NZX3   A0A0N0BFN3   A0A0L7R247   A0A3Q0IQD6  

Pubmed

26354079    22118469    28756777    18362917    19820115    28004739    + More
24845553    30249741    24508170    21719571    29403074    21347285    20798317    28648823   

EMBL

KQ460313    KPJ16043.1    KQ459595    KPI95944.1    AGBW02010380    OWR48606.1    + More
NWSH01000226    PCG78225.1    KZ149964    PZC76231.1    ODYU01011107    SOQ56637.1    RSAL01000002    RVE55046.1    RVE55099.1    KQ971309    KYB29541.1    GEZM01050724    JAV75418.1    KYB29540.1    EFA12334.2    KK852818    KDR15664.1    GBYB01010551    JAG80318.1    QOIP01000012    RLU15603.1    KK107353    EZA52110.1    KQ976948    KYN06876.1    GL888207    EGI64972.1    PYGN01000121    PSN53640.1    ADTU01004762    ADTU01004763    ADTU01004764    ADTU01004765    ADTU01004766    ADTU01004767    ADTU01004768    ADTU01004769    ADTU01004770    KQ976587    KYM79743.1    GL451627    EFN78900.1    KQ982944    KYQ48826.1    GEDC01026082    JAS11216.1    GGMR01000228    MBY12847.1    NNAY01001925    OXU22543.1    KQ980881    KYN11977.1    KQ981685    KYN37965.1    GL439408    EFN67327.1    GBRD01008267    JAG57554.1    KQ434778    KZC04420.1    KQ435794    KOX73588.1    KQ414666    KOC64952.1   

Proteomes

UP000053240    UP000053268    UP000007151    UP000218220    UP000283053    UP000007266    + More
UP000027135    UP000279307    UP000053097    UP000078542    UP000007755    UP000245037    UP000005205    UP000078540    UP000008237    UP000075809    UP000215335    UP000078492    UP000005203    UP000078541    UP000000311    UP000076502    UP000053105    UP000053825    UP000079169   

Interpro

IPR040350   TMEM272       

ProteinModelPortal

A0A194RDX7   A0A194PT53   A0A212F4E3   A0A2A4K1T3   A0A2W1BPL6   A0A2H1WUF6   + More
A0A3S2LW99   A0A139WNZ9   A0A1Y1LRF3   A0A139WNH2   D2CG22   A0A067R154   A0A0C9RST5   A0A3L8D6E4   A0A026W7U0   A0A195D205   F4WL09   A0A2P8ZAY1   A0A158NZM4   A0A195B5F6   E2BZK2   A0A151WLV3   A0A1B6CCN4   A0A2S2N6Q0   A0A232EW36   A0A151IWA0   A0A088AVA0   A0A195FBG1   E2AGR4   A0A0K8SWH7   A0A154NZX3   A0A0N0BFN3   A0A0L7R247   A0A3Q0IQD6  

KEGG

105841534    no KO assigned | (RefSeq) uncharacterized LOC105841534

GO

GO:0016021  

PANTHER

PTHR33444  

Length:

531

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

93.43988

Exp number, first 60 AAs:

0

Total prob of N-in:

0.52741

outside

1  -  373

TMhelix

374  -  396

inside

397  -  407

TMhelix

408  -  430

outside

431  -  444

TMhelix

445  -  467

inside

468  -  496

TMhelix

497  -  519

outside

520  -  531

 

 

Pi

182.736458

Theta

177.305376

Tajima's D

0.979759

CLR

0.492743

CSRT

0.653817309134543

Interpretation

Uncertain