SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13533
Pre Gene Modal
BGIBMGA000835
Annotation
PREDICTED:_uncharacterized_protein_LOC106140839_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 2.104
 

Sequence

CDS
ATGGAAACTTATACGTTCCTTGCGGAGGAGTTGGAAACGATCATAATAGTGAGCGTGTTCAGCTGCGCATGGCTGGTTGTGTTCGTGATGGCAGTGGTGCTGTGCGCGAGGGTCGCCTCCATCAGGCGGAGAGTAGACGACATGCAGGCCACCGGACGGATGAGGGTTCAAAAACTGAAAATGAATTCAGATAAGAACCACGCATTCCACAACCCGGGCCTGGTTCCTGATGAGGAGTTGTCCAGGCGAGGGTACTCCATGTACGTGGGCAGCGATGGCGACGTGGAAAGCGCCAGACCTTCGGAGCGGCAGACGGGTGGGCAGTTCGTAGAAGAGTTAACTAGAGAGATAGACCAGAGGCAGCAGAGGCAGTCGACCGCCCCGCCTTTCCTGCTGCAAAGCATCGAAGAAAACAAGAAGAAGAGCAGGAACCTCTACAATCCTACCGCAAATGGACGCCAAAGCGATACTAATCCCAATTTTATTTACTAA
Protein
METYTFLAEELETIIIVSVFSCAWLVVFVMAVVLCARVASIRRRVDDMQATGRMRVQKLKMNSDKNHAFHNPGLVPDEELSRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTANGRQSDTNPNFIY

Summary

Ontologies

Topology

Length:
163
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.53532
Exp number, first 60 AAs:
22.53532
Total prob of N-in:
0.04087
POSSIBLE N-term signal
sequence
outside
1  -  12
TMhelix
13  -  35
inside
36  -  163
 
 

Population Genetic Test Statistics

Pi
154.053492
Theta
130.422624
Tajima's D
0.439024
CLR
0.158168
CSRT
0.495325233738313
Interpretation
Uncertain
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