SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13532
Annotation
Uncharacterized_protein_OBRU01_05878_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.382 Nuclear   Reliability : 1.872
 

Sequence

CDS
ATGGAGTCCTGGTTTTGTTTGTGTCTGTTGCTCTCTGTCAGTTGTGGAGTGGTCAAGTGCTTAGGAATCGAGCAATTCTGGACAGACGATTACAAGACGTTTGAGAACGTTTACGGGAAGACATCAGACAAGGAAATATACGGCGCAACTTTACCGCCTGCCGTCAAACAAGGCGTCAAACGCGAGGCCTCCGAGAAGAAGGAACATCACCAGCTTAAGTACGACAGAGACGCATTCGACATCCACACCGCAGACACAAATACGGAATCAAAAAAACCAGCCATTTCAACGCAGAGCTTCATAAAATACACAGATTTTATACCAATAGCCCATACTACAGATCCGGAAAACTATGGTTATTTAAAGCAATTAGAAAATTATGAGAAAGATAACTCAAAATTTAGTGCACCCTTTCTTACTGCGAGTTTCAAATCACACGCTTCGAACACTTACAAAAGCATCAGAGATATTATTGAATCGGATCAACATAAAAACACTTTAGACAGTGTTACAGTTAGTGAGAATAAACTTAAAAACAGGCCGGTTAGGTTCAGGAATGATTCGCTGAAATCGAAATGCATTTCTGGAAGGTGCAATAAAATATCTTCAATCAGAGGAACGAAGCCTTACGTCGCTAGAATAAAACATAGGATTGTTAAGTATTAA
Protein
MESWFCLCLLLSVSCGVVKCLGIEQFWTDDYKTFENVYGKTSDKEIYGATLPPAVKQGVKREASEKKEHHQLKYDRDAFDIHTADTNTESKKPAISTQSFIKYTDFIPIAHTTDPENYGYLKQLENYEKDNSKFSAPFLTASFKSHASNTYKSIRDIIESDQHKNTLDSVTVSENKLKNRPVRFRNDSLKSKCISGRCNKISSIRGTKPYVARIKHRIVKY

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.987603
 
 
Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.503
Exp number, first 60 AAs:
1.503
Total prob of N-in:
0.07026
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
186.229675
Theta
172.720762
Tajima's D
0.554192
CLR
0
CSRT
0.531923403829809
Interpretation
Uncertain
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