SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13528  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001324
Annotation
juvenile_hormone_binding_protein_e96h-0303_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.446 Extracellular   Reliability : 1.347
 

Sequence

CDS
ATGTTGGTTCTTTGTTTTCTGTTTGCGTGTGCGTTTGTCGCGTCCGATGCGACAGATTTAGCAAAATTTATAACACCATGTCGACCAAAAGACACGGCTTGTCTGAAGTCCTCAGCGCAGAAGGCGGTACCGTTTCTCGCAGCGGGAATCGCCGATCTCGGTATTGAAACCATGGATCCGATGACCGTGGGCCGGGTGAACACCGTCCAGGCTGGCTTGCACATGGATTTTAGAGACACGACCGTCAGAGGCCTAAGGAACTGTGTAGTTTTAAATTTGAGGCGGTTACACGACAAGACCCTTCTAGATCTGAAGTGCTCTGTGACACTGGTTGGTGAATACACGTTGGGTGGCCAACTACTGATACTACCCATCGAAGGCACCGGAAAGTACAGGATCAGAATCCGGGACATCATAATGAAGATAATTCTAGACGTGGAGGAGAGAATAGTGGAGGGCGACAGGTACTGGCACGTCAGCGACTGGAAGCACAGCGCCGAGGACGTCTCCAAAGTCGAATACCAGTTCCAGAATTTGTTTAACGGCAACCGTGATTTGGCGAAGACAATCCACGATTTCGCGAACAGCAACTGGCGGGAAATCTTTCAGGAGGTGGCTCCTCCCATGGTCAAGGCTATCGTCTCCAAGATAATTCACGAAACATTCAAACTGTTCGATAAGGTGCCTATCAAGGATCTAGCATTAGAATAA
Protein
MLVLCFLFACAFVASDATDLAKFITPCRPKDTACLKSSAQKAVPFLAAGIADLGIETMDPMTVGRVNTVQAGLHMDFRDTTVRGLRNCVVLNLRRLHDKTLLDLKCSVTLVGEYTLGGQLLILPIEGTGKYRIRIRDIIMKIILDVEERIVEGDRYWHVSDWKHSAEDVSKVEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKAIVSKIIHETFKLFDKVPIKDLALE

Summary

EMBL
BABH01039666    BABH01039667    AB196708    BAE43416.1    AB383143    BAH97099.1    + More
KZ149964    PZC76239.1    NWSH01001445    PCG71215.1    MF196305    ATU07287.1    KQ459595    KPI95933.1    KQ460313    KPJ16053.1    EU834741    ACF39402.1    ODYU01001173    SOQ37017.1    AGBW02011789    OWR46125.1    AB196702    AB383136    BAE43410.1    BAH97092.1    RSAL01000069    RVE49225.1    BABH01039669    BABH01039670    EZ407252    ACX53809.1    SOQ37016.1    PZC76238.1    MF196302    ATU07284.1    GCVX01000229    JAI18001.1    KX585302    ARO70195.1    AK401870    BAM18492.1    KPI95934.1    RBVL01000182    RKO11020.1    NWSH01001136    PCG72453.1    KT443977    ANC68525.1    PCG72449.1    KX655906    AOG12855.1    MF196296    ATU07278.1    KQ460473    KPJ14397.1    GDQN01009976    JAT81078.1    RBVL01000055    RKO12710.1    KX585301    ARO70194.1    GCVX01000228    JAI18002.1    KP975118    ALT31637.1    EZ407239    ACX53796.1    AGBW02010899    OWR47537.1    KT443979    ANC68527.1    GCVX01000233    JAI17997.1    AK401142    BAM17764.1    KPI95815.1    GDQN01000386    JAT90668.1    SOQ37019.1    NWSH01002781    PCG67547.1    OWR46126.1    AB508818    BAH79158.1    MF196306    ATU07288.1    KT443974    ANC68522.1    AGBW02008184    OWR54053.1    RBVL01000071    RKO12462.1    ODYU01002699    SOQ40537.1    BABH01019428    BABH01019429    MF196298    ATU07280.1    RSAL01000076    RVE48836.1    KPJ16054.1    ODYU01004766    SOQ44995.1    BABH01039662    PCG71216.1    JTDY01007683    KOB65021.1    RBVL01000111    RKO12019.1    AK401191    BAM17813.1    KPI95932.1    KQ459600    KPI94188.1    PCG72452.1    AGBW02008844    OWR52406.1    KP975116    ALT31635.1    KPJ14399.1    KZ149950    PZC76666.1    RSAL01000004    RVE54631.1    KQ459299    KPJ01910.1    KT443978    ANC68526.1    ODYU01002134    SOQ39241.1    NWSH01000154    PCG78990.1    JTDY01004021    KOB68703.1    GENK01000006    JAV45907.1    GCVX01000231    JAI17999.1    MF196303    ATU07285.1    PZC76240.1    EZ407142    ACX53704.1    PCG78987.1    KY419208    AVC68634.1    KP729044    AKT26502.1    AK402095    BAM18717.1    KT261655    MF196311    ALJ30196.1    ATU07293.1    ODYU01000574    SOQ35570.1    PZC76662.1    KPI95814.1    GCVX01000232    JAI17998.1    AK402595    BAM19217.1    AK401330    BAM17952.1    SOQ40539.1    KQ461195    KPJ06750.1    MF196310    ATU07292.1    BABH01015382    KT261667    MF196309    ALJ30208.1    ATU07291.1    NWSH01000992    PCG73196.1    GCVX01000234    JAI17996.1    NWSH01001221    PCG72068.1    RVE54627.1    KZ149944    PZC76852.1    KQ460202    KPJ17177.1   
Pfam
PF06585   JHBP        + More
PF07648   Kazal_2
PF00050   Kazal_1
Interpro
IPR010562   Haemolymph_juvenile_hormone-bd        + More
IPR038606   To_sf       
IPR002350   Kazal_dom       
IPR036058   Kazal_dom_sf       
SUPFAM
SSF100895   SSF100895       
Gene 3D
PDB
4G0S     E-value=3.1251e-19,     Score=231

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.989024
 
 
Length:
236
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1751
Exp number, first 60 AAs:
0.14157
Total prob of N-in:
0.01314
outside
1  -  236
 
 

Population Genetic Test Statistics

Pi
218.653964
Theta
160.017438
Tajima's D
0.461703
CLR
0.430867
CSRT
0.505174741262937
Interpretation
Uncertain
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