Gene

KWMTBOMO13526  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001323

Annotation

short-chain_dehydrogenease/reductase_[Bombyx_mori]

Location

Bomo_Chr23(+):712468-713600      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.525

CDS

ATGAATTTTGCCGGCAAAGTCGTTATCGTAACCGGTGCCAGCTCCGGAATTGGAGCGGCCACCGCCGTATTCTTATCAAAATTAGGCGCTCAACTATCTTTGACGGGAAGAAACGTGGAGAACTTGCAAAAAGTGAGTAAGGACTGCGACAAATTTGCGTCAACACTGTCAATAACCGCAGATTTGACCAAAGAAAGTGATATTGAGAAAATCATTAAGAAAACCATTGACCATTACGGAAAGTTGGACGTTTTAGTGAATAATGCCGGTATTATTGAAACTGGAACCATCGAGAACACCTCCTTGGCCCAGTATGATCGTCTTATGAACACCAATGTGCGTTCAATTTACTATCTGACGATGCTGGCGGTCCCTCATCTCCTCGAAAGCAAAGGGAATGTTGTAAACGTATCGAGTGTTAATGGGATTCGCTCTTTCCCTGGAGTTCTGGCATACAACATCTCCAAAGCATCTGTTGACCAATTCACTCGCTGTGTTGCTTTAGAATTAGCACCGAAAGGAGTCCGGGTTAACTGTGTCAATCCTGGAGTAATTCTAACAGAGCTACAAAGAAGGGGAGGGTTGAGTGAGGAGCAATATGCAGCATTCTTAGAGAGGACTAAAGAAACTCATGCATTGGGACGTCCAGGTAAACCAGATGAGGTGGCAGCAACAATTGCATTCCTTGCCAGCGACTTGGCAAGTAATATCACTGGTGCCAGTGTGCCAGTCGACGGTGGACGTCATGCTATGTGTCCGCGCTAA

Protein

MNFAGKVVIVTGASSGIGAATAVFLSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGNVVNVSSVNGIRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGGRHAMCPR

Uniprot

H9IVP2   Q2F652   A0A194PR52   S4PX81   A0A212F8M7   A0A194RFH9   + More
A0A2H1V849   A0A2A4JMG8   I4DNP9   A0A2W1BPM7   A0A0L7KPW7   A0A3B0JQC7   B0X0M4   A0A336MBZ2   J3JT59   A0A336MQF8   A0A182SIK2   A0A182K3V2   A0A182IZ26   A0A182VPA1   A0A182TD91   J9HY30   A0A023ENP4   A0A182P965   A0A182LEW9   A0A084VXY0   U5EYA8   A0A182HAP4   A0A182XHV8   Q7PR84   A0A182HSU0   A0A182YHM9   A0A1Q3FCK0   A0A182NRQ3   A0A182RS31   A0A2M4BX09   Q297M5   A0A182VWT1   A0A2M4BYA6   W5J874   A0A182FRI8   A0A182S060   B4G477   A0A2M4CFR9   A0A1L8DJ46   A0A1L8DIV7   B6DE48   T1E9L4   A0A2M4ALM7   A0A1S3IQP8   A0A2M3Z9F7   A0A023F8F0   A0A1J1IX96   A0A1S3IQ98   A0A182Q481   K1QNK4   A0A1Q3FM45   A0A2M4CFR3   D6WBF1   A0A210QB37   A0A067R623   B0X121   A0A069DY41   R4FQ30   B3LWF9   A0A1J1IYY0   A0A2P8Y4R7   A0A1B6D562   B4PUV7   B4QWZ5   B4I447   A0A0B6XYA1   Q8IPP8   A0A1B6GU46   A0A3B0JRW2   Q8IGG7   A0A1W0W921   A0A1A9XQ36   A0A2J7QPM6   A0A1W4XV70   A0A1I8MT18   A0A2J7QPM2   A0A1B6JEH2   A0A1A9UR64   A0A0M4EK12   A0A1I8PG95   A0A1B0BDB6   A0A1Y1LAV0   A0A1W4UJZ5   A0A1I8N5T2   D3TP78   B4G476   A0A1A9WRZ6   A0A1A9ZDI9   A0A1L8EDR4   A0A1D1V7Y6   Q297M6   A0A1I8N405   A0A0L0CQ82   B4NKA6  

Pubmed

19121390    26354079    23622113    22118469    22651552    28756777    + More
26227816    22516182    23537049    17510324    24945155    20966253    24438588    26483478    12364791    14747013    17210077    25244985    15632085    17994087    20920257    23761445    19178717    25474469    22992520    18362917    19820115    28812685    24845553    26334808    29403074    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25315136    28004739    20353571    27649274    26108605   

EMBL

BABH01039662    DQ311220    ABD36165.1    KQ459595    KPI95931.1    GAIX01005498    + More
JAA87062.1    AGBW02009702    OWR50087.1    KQ460313    KPJ16055.1    ODYU01001173    SOQ37020.1    NWSH01000983    PCG73247.1    AK403072    BAM19539.1    KZ149964    PZC76241.1    JTDY01007683    KOB65019.1    OUUW01000007    SPP83133.1    DS232242    EDS38266.1    UFQT01000630    SSX25907.1    BT126415    KB632402    AEE61379.1    ERL94969.1    UFQS01001990    UFQT01001990    SSX12878.1    SSX32320.1    CH477221    EJY57385.1    GAPW01003549    JAC10049.1    ATLV01018212    KE525224    KFB42824.1    GANO01000477    JAB59394.1    JXUM01081382    JXUM01123063    KQ566675    KQ563243    KXJ69914.1    KXJ74217.1    AAAB01008859    EAA07681.6    APCN01000350    GFDL01009740    JAV25305.1    GGFJ01008403    MBW57544.1    CM000070    EAL28180.1    GGFJ01008577    MBW57718.1    ADMH02002105    ETN58984.1    CH479179    EDW25115.1    GGFL01000008    MBW64186.1    GFDF01007697    JAV06387.1    GFDF01007698    JAV06386.1    EU934417    ACI30195.1    GAMD01001242    JAB00349.1    GGFK01008374    MBW41695.1    GGFM01004369    MBW25120.1    GBBI01001127    GEMB01003820    JAC17585.1    JAR99434.1    CVRI01000063    CRL04899.1    AXCN02000007    JH819182    EKC38462.1    GFDL01006355    JAV28690.1    GGFL01000009    MBW64187.1    KQ971312    EEZ97890.1    NEDP02004373    OWF45934.1    KK852678    KDR18660.1    DS232250    EDS38413.1    GBGD01002600    JAC86289.1    ACPB03001903    GAHY01000619    JAA76891.1    CH902617    EDV43792.1    CRL04898.1    PYGN01000933    PSN39247.1    GEDC01016505    JAS20793.1    CM000160    EDW97764.1    CM000364    EDX11757.1    CH480821    EDW54990.1    HACG01002182    CEK49047.1    AE014297    AAN13253.1    GECZ01003828    JAS65941.1    SPP83132.1    BT001792    AAN71547.1    MTYJ01000163    OQV11704.1    NEVH01012088    PNF30537.1    PNF30536.1    GECU01010179    JAS97527.1    CP012526    ALC45377.1    JXJN01012385    GEZM01064587    JAV68706.1    CCAG010015625    EZ423230    ADD19506.1    EDW25114.1    GFDG01002003    JAV16796.1    BDGG01000004    GAU97811.1    EAL28179.1    JRES01000061    KNC34518.1    CH964272    EDW84036.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000218220    UP000037510    + More
UP000268350    UP000002320    UP000030742    UP000075901    UP000075881    UP000075880    UP000075903    UP000075902    UP000008820    UP000075885    UP000075882    UP000030765    UP000069940    UP000249989    UP000076407    UP000007062    UP000075840    UP000076408    UP000075884    UP000075900    UP000001819    UP000075920    UP000000673    UP000069272    UP000008744    UP000085678    UP000183832    UP000075886    UP000005408    UP000007266    UP000242188    UP000027135    UP000015103    UP000007801    UP000245037    UP000002282    UP000000304    UP000001292    UP000000803    UP000092443    UP000235965    UP000192223    UP000095301    UP000078200    UP000092553    UP000095300    UP000092460    UP000192221    UP000092444    UP000091820    UP000092445    UP000186922    UP000037069    UP000007798   

PRIDE

H9IVP2    Q2F652    Q8IPP8    Q8IGG7   

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9IVP2   Q2F652   A0A194PR52   S4PX81   A0A212F8M7   A0A194RFH9   + More
A0A2H1V849   A0A2A4JMG8   I4DNP9   A0A2W1BPM7   A0A0L7KPW7   A0A3B0JQC7   B0X0M4   A0A336MBZ2   J3JT59   A0A336MQF8   A0A182SIK2   A0A182K3V2   A0A182IZ26   A0A182VPA1   A0A182TD91   J9HY30   A0A023ENP4   A0A182P965   A0A182LEW9   A0A084VXY0   U5EYA8   A0A182HAP4   A0A182XHV8   Q7PR84   A0A182HSU0   A0A182YHM9   A0A1Q3FCK0   A0A182NRQ3   A0A182RS31   A0A2M4BX09   Q297M5   A0A182VWT1   A0A2M4BYA6   W5J874   A0A182FRI8   A0A182S060   B4G477   A0A2M4CFR9   A0A1L8DJ46   A0A1L8DIV7   B6DE48   T1E9L4   A0A2M4ALM7   A0A1S3IQP8   A0A2M3Z9F7   A0A023F8F0   A0A1J1IX96   A0A1S3IQ98   A0A182Q481   K1QNK4   A0A1Q3FM45   A0A2M4CFR3   D6WBF1   A0A210QB37   A0A067R623   B0X121   A0A069DY41   R4FQ30   B3LWF9   A0A1J1IYY0   A0A2P8Y4R7   A0A1B6D562   B4PUV7   B4QWZ5   B4I447   A0A0B6XYA1   Q8IPP8   A0A1B6GU46   A0A3B0JRW2   Q8IGG7   A0A1W0W921   A0A1A9XQ36   A0A2J7QPM6   A0A1W4XV70   A0A1I8MT18   A0A2J7QPM2   A0A1B6JEH2   A0A1A9UR64   A0A0M4EK12   A0A1I8PG95   A0A1B0BDB6   A0A1Y1LAV0   A0A1W4UJZ5   A0A1I8N5T2   D3TP78   B4G476   A0A1A9WRZ6   A0A1A9ZDI9   A0A1L8EDR4   A0A1D1V7Y6   Q297M6   A0A1I8N405   A0A0L0CQ82   B4NKA6  

PDB

1SPX     E-value=1.6227e-29,     Score=320

KEGG

692844    no KO assigned | (RefSeq) short-chain dehydrogenease/reductase

GO

GO:0016491   GO:0016021   GO:0047045   GO:0004303   GO:0016627   GO:0005737   GO:0008235   GO:0019538   GO:0030145   GO:0003676   GO:0015930  

Length:

254

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

17.2786

Exp number, first 60 AAs:

17.14672

Total prob of N-in:

0.84780

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  26

outside

27  -  254

 

 

Pi

207.374429

Theta

202.460811

Tajima's D

0.058167

CLR

113.338447

CSRT

0.385330733463327

Interpretation

Uncertain