Gene

KWMTBOMO13524

Pre Gene Modal

BGIBMGA001321

Annotation

PREDICTED:_ubiquitin_domain-containing_protein_2-like_[Amyelois_transitella]

Location

Bomo_Chr23(+):680978-692500      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.719

CDS

ATGGGTGGCTGTATAGGTATTACTAGAAGTGGCAGCGGGCACATAGAGGAATCTTCTGGGACAGTTTCTCGGCCTAATTCGGGAGGCCTAAGGAAAAACCAATCATTATGTCATGAAACAATCAGATGGAAGTCAGACGTACCTCTCACAGAGGGTCAGCTACGTAGCAAAAGAGATGAATTTTGGGACACCGCTCCAGCATTTGATGGCAGAAAAGAGATATGGGATGCTCTTAGAGCAGCTGCTGTAGCTGCTGAGGCTATGGACTTCCAGTTGGCCCAAGCTATTCTGGATGGAGCTAGTGTTTCAGTGCCTAATGGCTACCTCACAGAGTGCTATGATGAATGGGGCACAAGATATCAGGTACCGATATACTGTTTGTCTCCACCGATAAACATGGTGAAAGAGGCAAGCGGGCGCGACTCCCCGGCGGAGTGGTCGGAGCCGGCGGAGGGCGGCGCGGAGGTCACCCTGAGACTTCGCCTCTCCAGCTCCTGCAGGGACGTGGAGCTGGCGGTCTGCTCGCGGCACACGGTCGCGCACTGCAAGAACAAGCTACACGCTCAAGAGAACATAGAACCGTGGAGACAACGGTGGTTCTACGGGGGCAAGCTGCTCGGCGACAGACTGCTGGTGGAGGAAGCGAAGATCACTCCGGGGTACGTGGTGCAGGTCATCGTCAGCACCGACCCTCAGCCTCCCAGCTAG

Protein

MGGCIGITRSGSGHIEESSGTVSRPNSGGLRKNQSLCHETIRWKSDVPLTEGQLRSKRDEFWDTAPAFDGRKEIWDALRAAAVAAEAMDFQLAQAILDGASVSVPNGYLTECYDEWGTRYQVPIYCLSPPINMVKEASGRDSPAEWSEPAEGGAEVTLRLRLSSSCRDVELAVCSRHTVAHCKNKLHAQENIEPWRQRWFYGGKLLGDRLLVEEAKITPGYVVQVIVSTDPQPPS

Uniprot

A0A2W1BRG8   A0A2A4JPA9   A0A0L7KPG4   A0A194PSI3   A0A212F8L4   H9IVP0   + More
D6WC53   V5I8D0   A0A1Y1M1Q9   A0A194REP9   A0A067QT11   A0A2J7QSM0   A0A2H1WCL5   A0A1B6LBA7   A0A1B6FU03   A0A1B6H8F1   A0A1B6CF31   A0A224XVR1   A0A0V0GAA4   A0A069DQF1   A0A0P4VKL0   R4G858   U5EYD6   A0A0N0U4P8   A0A2A3ET54   V9IHY0   A0A088AF98   A0A310SKL3   A0A154PT76   A0A1B6C3T1   A0A151XGU8   A0A151ID25   A0A151ISS4   A0A195F883   A0A158N9N6   A0A023EKZ1   A0A0P6IUS9   F4WTS9   A0A0J7KXP2   E2BRJ6   W5JB78   A0A3L8D5K2   A0A1Q3G300   A0A2M4AT84   A0A182FNK3   T1E2X1   A0A0L7QYJ2   A0A2M3Z9H3   A0A182P2M1   A0A182Q290   A0A182JU46   A0A182WSW0   Q7PY51   A0A182HLR4   A0A2H8TMM5   A0A2S2P4R1   A0A182M669   A0A182VRS8   A0A182XUZ9   J9JQG7   A0A0A9XXE8   A0A1L8DTB2   E2A8P9   A0A336MFK6   A0A0T6B668   W8BU60   A0A1B0CF26   U4TVI2   B3P2C9   J3JXQ0   B0XAX5   A0A1W4UX72   A0A0A1X290   B3LZI7   B4QWB1   B4I3Z7   A0A3B0JQ80   Q296E5   B4GFA0   A0A182RPD1   Q9VNB2   B4PV93   A0A0K8VBM3   A0A034VXJ0   A0A1I8PP99   D3TQ90   B4KDN8   B4JSM2   A0A1W4X5T3   T1PKK3   A0A0L0CDY2   A0A1A9Y8D2   B4NF57   A0A1J1IG17   A0A026WY71   A0A195BQ67   A0A3B0JQF2   B4M5F4   N6TW52   A0A0M4EPD6  

Pubmed

28756777    26227816    26354079    22118469    19121390    18362917    + More
19820115    28004739    24845553    26334808    27129103    21347285    24945155    26999592    21719571    20798317    20920257    23761445    30249741    24330624    12364791    14747013    17210077    25244985    25401762    26823975    24495485    23537049    17994087    22516182    25830018    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25348373    20353571    25315136    26108605    24508170   

EMBL

KZ149964    PZC76244.1    NWSH01000983    PCG73252.1    JTDY01007756    KOB64966.1    + More
KQ459595    KPI95928.1    AGBW02009702    OWR50085.1    BABH01039659    BABH01039660    KQ971316    EEZ98762.1    GALX01004900    JAB63566.1    GEZM01042741    GEZM01042740    JAV79659.1    KQ460313    KPJ16057.1    KK853313    KDR08629.1    NEVH01011876    PNF31567.1    ODYU01007736    SOQ50777.1    GEBQ01027504    GEBQ01020956    GEBQ01019031    GEBQ01015164    GEBQ01007660    JAT12473.1    JAT19021.1    JAT20946.1    JAT24813.1    JAT32317.1    GECZ01016168    JAS53601.1    GECU01036757    JAS70949.1    GEDC01025300    GEDC01023478    JAS11998.1    JAS13820.1    GFTR01003886    JAW12540.1    GECL01001033    JAP05091.1    GBGD01002759    JAC86130.1    GDKW01001721    JAI54874.1    ACPB03013951    GAHY01001547    JAA75963.1    GANO01000427    JAB59444.1    KQ435821    KOX72294.1    KZ288185    PBC34877.1    JR045919    AEY60086.1    KQ765222    OAD54067.1    KQ435180    KZC14977.1    GEDC01029132    GEDC01011689    JAS08166.1    JAS25609.1    KQ982169    KYQ59531.1    KQ977991    KYM98286.1    KQ981064    KYN09886.1    KQ981727    KYN36653.1    ADTU01009723    GAPW01003732    JAC09866.1    GDUN01001028    JAN94891.1    GL888344    EGI62394.1    LBMM01002073    KMQ95312.1    GL449965    EFN81688.1    ADMH02002001    ETN60019.1    QOIP01000014    RLU15128.1    GFDL01000871    JAV34174.1    GGFK01010685    MBW44006.1    GALA01000900    JAA93952.1    KQ414688    KOC63669.1    GGFM01004435    MBW25186.1    AXCN02000143    AAAB01008987    EAA01254.3    APCN01000911    GFXV01003376    MBW15181.1    GGMR01011786    MBY24405.1    AXCM01001440    ABLF02031944    ABLF02031947    GBHO01019035    GBRD01008526    GDHC01009390    JAG24569.1    JAG57295.1    JAQ09239.1    GFDF01004460    JAV09624.1    GL437663    EFN70128.1    UFQT01001145    SSX29144.1    LJIG01009541    KRT82873.1    GAMC01009724    JAB96831.1    AJWK01009600    KB631625    ERL84807.1    CH954181    EDV47879.1    BT128020    AEE62982.1    DS232602    EDS43945.1    GBXI01009452    JAD04840.1    CH902617    EDV41929.1    CM000364    EDX11710.1    CH480821    EDW54940.1    OUUW01000008    SPP84354.1    CM000070    EAL28513.2    CH479182    EDW34285.1    AE014297    AY084174    AAF52034.1    AAL89912.1    CM000160    EDW95762.1    GDHF01016041    JAI36273.1    GAKP01010911    JAC48041.1    EZ423592    ADD19868.1    CH933806    EDW13872.1    CH916373    EDV94762.1    KA645037    KA649239    AFP63868.1    JRES01000531    KNC30412.1    CH964251    EDW83432.1    CVRI01000049    CRK99197.1    KK107083    EZA60079.1    KQ976428    KYM87821.1    SPP84355.1    CH940652    EDW59865.1    APGK01052516    APGK01052517    KB741213    ENN72596.1    CP012526    ALC45947.1   

Proteomes

UP000218220    UP000037510    UP000053268    UP000007151    UP000005204    UP000007266    + More
UP000053240    UP000027135    UP000235965    UP000015103    UP000053105    UP000242457    UP000005203    UP000076502    UP000075809    UP000078542    UP000078492    UP000078541    UP000005205    UP000007755    UP000036403    UP000008237    UP000000673    UP000279307    UP000069272    UP000053825    UP000075885    UP000075886    UP000075881    UP000076407    UP000007062    UP000075840    UP000075883    UP000075920    UP000076408    UP000007819    UP000000311    UP000092461    UP000030742    UP000008711    UP000002320    UP000192221    UP000007801    UP000000304    UP000001292    UP000268350    UP000001819    UP000008744    UP000075900    UP000000803    UP000002282    UP000095300    UP000009192    UP000001070    UP000192223    UP000095301    UP000037069    UP000092443    UP000007798    UP000183832    UP000053097    UP000078540    UP000008792    UP000019118    UP000092553   

PRIDE

H9IVP0    Q9VNB2   

Pfam

PF00240   ubiquitin        + More
PF16455   UBD
PF17906   HTH_48

Interpro

IPR038169   DC-UbP/UBTD2_N_sf        + More
IPR000626   Ubiquitin_dom       
IPR029071   Ubiquitin-like_domsf       
IPR039869   UBTD1/2       
IPR032752   DC-UbP/UBTD2_N       
IPR019956   Ubiquitin       
IPR041426   Mos1_HTH       

SUPFAM

SSF54236   SSF54236       

Gene 3D

1.20.225.20    

ProteinModelPortal

A0A2W1BRG8   A0A2A4JPA9   A0A0L7KPG4   A0A194PSI3   A0A212F8L4   H9IVP0   + More
D6WC53   V5I8D0   A0A1Y1M1Q9   A0A194REP9   A0A067QT11   A0A2J7QSM0   A0A2H1WCL5   A0A1B6LBA7   A0A1B6FU03   A0A1B6H8F1   A0A1B6CF31   A0A224XVR1   A0A0V0GAA4   A0A069DQF1   A0A0P4VKL0   R4G858   U5EYD6   A0A0N0U4P8   A0A2A3ET54   V9IHY0   A0A088AF98   A0A310SKL3   A0A154PT76   A0A1B6C3T1   A0A151XGU8   A0A151ID25   A0A151ISS4   A0A195F883   A0A158N9N6   A0A023EKZ1   A0A0P6IUS9   F4WTS9   A0A0J7KXP2   E2BRJ6   W5JB78   A0A3L8D5K2   A0A1Q3G300   A0A2M4AT84   A0A182FNK3   T1E2X1   A0A0L7QYJ2   A0A2M3Z9H3   A0A182P2M1   A0A182Q290   A0A182JU46   A0A182WSW0   Q7PY51   A0A182HLR4   A0A2H8TMM5   A0A2S2P4R1   A0A182M669   A0A182VRS8   A0A182XUZ9   J9JQG7   A0A0A9XXE8   A0A1L8DTB2   E2A8P9   A0A336MFK6   A0A0T6B668   W8BU60   A0A1B0CF26   U4TVI2   B3P2C9   J3JXQ0   B0XAX5   A0A1W4UX72   A0A0A1X290   B3LZI7   B4QWB1   B4I3Z7   A0A3B0JQ80   Q296E5   B4GFA0   A0A182RPD1   Q9VNB2   B4PV93   A0A0K8VBM3   A0A034VXJ0   A0A1I8PP99   D3TQ90   B4KDN8   B4JSM2   A0A1W4X5T3   T1PKK3   A0A0L0CDY2   A0A1A9Y8D2   B4NF57   A0A1J1IG17   A0A026WY71   A0A195BQ67   A0A3B0JQF2   B4M5F4   N6TW52   A0A0M4EPD6  

PDB

2KSN     E-value=2.72217e-37,     Score=387

KEGG

101739595    no KO assigned | (RefSeq) ubiquitin domain-containing protein 2

GO

GO:0005515   GO:0043130   GO:0006508   GO:0005737   GO:0008235   GO:0019538   GO:0030145   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR13609  

Length:

235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00126

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04890

outside

1  -  235

 

 

Pi

197.708405

Theta

154.957752

Tajima's D

0.615252

CLR

0.034991

CSRT

0.552072396380181

Interpretation

Uncertain