SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13521
Pre Gene Modal
BGIBMGA001311
Annotation
PREDICTED:_cytosol_aminopeptidase-like_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 1.105 Mitochondrial   Reliability : 1.271 Nuclear   Reliability : 1.049
 

Sequence

CDS
ATGTTTCCCATTCAGAGTAGACAGCCTTCCACCCCATCTCGGGCTATAGTTCTGTTCGACGCGAACGACCCTTCAGTGGACTTGAGGAATAAAGGTTCCGGCAAAGCTACCTCTTGTCTCGGGGCTGCGTTCTTAAAGAGCTTCGTGTGCTGCTCGTGGCTGCACGTGGACACGACGGGCGTGGGCAAGCTGGCGCACGGCTCGGCGCCGCCCTACCTGTCCGCGCGCCGCATGACGGGCCGCCCGGCGCGCACGCTCGTGGCGCTGCTGCAGCGTCTGGCCGCCGCGCCCTAG
Protein
MFPIQSRQPSTPSRAIVLFDANDPSVDLRNKGSGKATSCLGAAFLKSFVCCSWLHVDTTGVGKLAHGSAPPYLSARRMTGRPARTLVALLQRLAAAP

Summary

EMBL
NWSH01000983    PCG73253.1    PCG73254.1    KZ149964    PZC76247.1    KQ460313    + More
KPJ16059.1    ODYU01005154    SOQ45734.1    KQ459595    KPI95927.1    MF319730    ASJ26444.1    AXCM01000141    GAPW01001436    JAC12162.1    JXUM01050664    KQ561657    KXJ77896.1    ATLV01014963    KE524999    KFB39685.1    CH477415    EAT41391.1    AAAB01008964    EAA12913.5    ADMH02002093    ETN59318.1    DS231860    EDS39343.1    APCN01002503    GFDL01004170    JAV30875.1    AXCN02000870    AAZO01006245    AGBW02009702    OWR50084.1    DS235845    EEB18391.1    GAPW01000821    JAC12777.1    KQ971312    EEZ98647.1    PYGN01000268    PSN49667.1    GEZM01087698    JAV58527.1    CM000071    EAL25024.2    CH479181    EDW31851.1    UFQT01000071    SSX19389.1    CH964154    EDW79742.1    CH940647    KRF84754.1    CP012524    ALC41679.1    EDW70186.1    GEZM01087697    JAV58528.1    GDHF01029522    JAI22792.1    APGK01053205    KB741222    ENN72410.1    ALC41017.1    JRES01000575    KNC30144.1    KB631665    ERL85139.1    CH916366    EDV96931.1    GDHF01023131    JAI29183.1    CP012525    ALC43791.1    OUUW01000001    SPP73453.1    CH902619    EDV37739.1    GAKP01011448    JAC47504.1    KPU77007.1    SPP74257.1    GAMC01005676    JAC00880.1    GBXI01003796    JAD10496.1    CH954179    EDV56129.1    EDV37939.1    CH940648    EDW60731.1    EDW70188.1    OUUW01000002    SPP76679.1    SPP76683.1    CH916367    EDW01089.1    CH933809    EDW19536.2    KRG06679.1    CH379058    CH673070    EDY69788.1    EDY71927.1    CH479184    EDW36986.1    EDW62042.2    CH902618    EDV40620.1    EDW19534.1    CM000363    EDX09970.1    CH933808    EDW10253.1    CM002912    KMY98842.1    CH480815    EDW40983.1    AY047518    AE014296    AAK77250.1    AAN11916.1    AAN11917.1    AGB94373.1    CH954178    EDV51307.1    CH917146    EDW05210.1    CM000159    EDW94014.1    KRK01603.1    CH379061    EDY70600.1    CH479195    EDW27414.1    CM000362    CM002911    EDX06962.1    KMY93559.1    CH479214    EDW33485.1    CH480816    EDW47762.1    EDV40619.1    CH964161    EDW80048.1    CH964168    EDW80059.1    CH379069    EAL29510.2    ALC43790.1    AE013599    BT022093    AAF58338.1    AAY33509.1    AGB93491.1   
Pfam
PF13532   2OG-FeII_Oxy_2        + More
PF00883   Peptidase_M17
PF02789   Peptidase_M17_N
PF00096   zf-C2H2
PF07776   zf-AD
PF06743   FAST_1
PF08373   RAP
PF10558   MTP18
Interpro
IPR027450   AlkB-like        + More
IPR005123   Oxoglu/Fe-dep_dioxygenase       
IPR011356   Leucine_aapep/pepB       
IPR037151   AlkB-like_sf       
IPR000819   Peptidase_M17_C       
IPR008283   Peptidase_M17_N       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR010622   FAST_Leu-rich       
IPR013584   RAP       
IPR019560   Mitochondrial_18_kDa_protein_       
SUPFAM
SSF57667   SSF57667       
Gene 3D
PDB
1LCP     E-value=3.0194e-05,     Score=106

Ontologies

Topology

Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.20497
Exp number, first 60 AAs:
0.20017
Total prob of N-in:
0.14927
outside
1  -  97
 
 

Population Genetic Test Statistics

Pi
162.166628
Theta
134.017115
Tajima's D
0.469121
CLR
0
CSRT
0.509924503774811
Interpretation
Uncertain
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