Gene

KWMTBOMO13520  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001319

Annotation

Calmodulin?_partial_[Trichinella_pseudospiralis]

Location

Bomo_Chr23(+):626288-662234      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.413

CDS

ATGGCGGATCAGCTGACGGAAGAACAGATCGCCGAGTTTAAGGAGGCATTCTCACTGTTCGACAAAGACGGCGATGGCACCATCACGACCAAAGAGCTGGGCACCGTGATGAGGTCGCTAGGACAGAACCCCACAGAAGCCGAACTTCAAGACATGATCAATGAAGTAGACGCGGACGGAAACGGCACGATAGACTTTCCCGAGTTCTTGACAATGATGGCGCGCAAGATGAAGGACACGGATAGCGAGGAAGAAATCCGCGAGGCCTTCCGCGTCTTCGACAAGGACGGCAACGGCTTCATCTCCGCGGCCGAGCTGCGCCACGTCATGACCAACCTCGGAGAGAAACTCACTGACGAGGAGGTCGACGAGATGATTCGCGAGGCCGATATCGACGGCGACGGCCAGGTCAATTACGAAGAGTTCGTCACCATGATGACGTCGAAGTGA

Protein

MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK

Similarity

Belongs to the calmodulin family.

Uniprot

A0A2M4CHJ9   A0A0P6GTU5   A0A2M4CHG8   A0A2M4CI03   A0A1I9WLC8   A0A0V0XXP7   + More
T1EAD2   A0A1L8E5R9   A0A171AUZ1   A0A2M3YY20   A0A1Q3FVD0   A0A0F7VHG0   A0A2L2Y0W1   A0A0F7VHE4   A0A0P5RUR5   C6SUZ2   A0A1B1X408   A0A1D1Z6U7   A0A1Y1LBB4   A0A224XZ95   D1FQ11   A0A1L8E5P3   T1D1N0   K4IPB7   A0A023EGV4   C1BZZ7   A0A224YTS4   W8BJI6   A0A2C9K5Z2   A0A221LCA4   R4SCH1   T1IQM0   A0A1W7RAV6   H8ZM86   A0A1W4X129   A0A0P4WF35   A0A3B0J5N8   Q6WSU5   A0A0N7Z9F5   A0A3G5APF9   T1E367   A0A1E1XJF4   A0A0B7A261   A0A131Z1F6   A0A3S0ZEV4   A0A1S3H7Q1   B4G9V3   K7IWY5   Q5XUA8   D6WB91   A0A0C9QZX5   A0A034WPE0   A0A0V0G4G1   A0A023F5W8   E7D1F3   Q76LB7   A0A0M3QV58   H6SWV2   A0A346QR72   E2J7D5   R4WCV1   A0A1J1IW19   A0A1D2N6J8   A0A088AD88   A0A075F404   A0A1S4H5D0   L7LXE1   Q1W2B3   R4S154   A0A023FWI6   I1V229   A0A0F7VJD4   I6LKW0   A0A3G5ANY4   A0A2I9LNT8   Q2F5T2   B4MY99   A0A293MVX1   A0A0L0C9L1   B4HP77   A0A1Z5LGF3   A0A131XC76   A0A0A1X0D7   S4PHH1   A0A191SEJ6   R9TI07   A0A2C9GQE4   A0A1B6DP62   A0A1E1X0D7   A0A1B6HBK9   A0A3L8DC46   E9H5Z2   K9S0T9   A0A069DN97   V4BWJ9   E3UJZ8   B4QC96   A0A1W4UHE8   A0A2J7QFD1   A0A0K8TWL1  

Pubmed

27538518    26561354    28004739    24945155    28797301    24495485    + More
15562597    27717101    23671084    22348072    27129103    24330624    29209593    26830274    17994087    20075255    18362917    19820115    26131772    25348373    25474469    23691247    27289101    24997436    12364791    25576852    22507549    29248469    26108605    28528879    28049606    25830018    23622113    28503490    30249741    21292972    26334808    23254933    22044719    22936249   

EMBL

GGFL01000527    MBW64705.1    GDIQ01028423    JAN66314.1    GGFL01000612    MBW64790.1    + More
GGFL01000613    MBW64791.1    KU932312    APA33948.1    JYDU01000102    KRX92830.1    GAMD01000542    JAB01049.1    GFDF01000199    JAV13885.1    GEMB01000626    JAS02507.1    GGFM01000385    MBW21136.1    GFDL01003474    JAV31571.1    LN830645    CFW94154.1    IAAA01001390    IAAA01001391    IAAA01001392    LAA01836.1    LN830640    CFW94149.1    GDIQ01105206    JAL46520.1    BT088984    ACT88125.1    KU578024    ANW72275.1    GDJX01005340    JAT62596.1    GEZM01064027    JAV68856.1    GFTR01002514    JAW13912.1    EZ419911    ACZ28266.1    GFDF01000120    JAV13964.1    GAKT01000148    JAA92914.1    JX462608    AFU72271.1    GAPW01005554    JAC08044.1    BT080176    ACO14600.1    GFPF01006507    MAA17653.1    GAMC01013124    JAB93431.1    KX578900    ASM90733.1    KC810053    AGL94768.1    JH431312    GFAH01000116    JAV48273.1    JN314840    AFC93271.1    GDRN01035794    JAI67390.1    OUUW01000001    SPP75123.1    AY269783    AAQ01510.2    GDKW01000691    JAI55904.1    MH979776    AYV89231.1    GALA01000645    JAA94207.1    GFAA01004090    JAT99344.1    HACG01027336    CEK74201.1    GEDV01003303    JAP85254.1    RQTK01000695    RUS75976.1    CH479181    EDW31705.1    AAZX01000614    AAZX01004238    AY737546    AAU84939.1    KQ971312    EEZ98710.1    GBZX01002435    JAG90305.1    GAKP01002438    JAC56514.1    GECL01003178    JAP02946.1    GBBI01002137    JAC16575.1    HQ005901    ADV40197.1    AB081568    BAB89360.1    CP012524    ALC41839.1    HQ176458    ADX05545.1    MG910474    AXR98462.1    HP429353    ADN29853.1    AK417193    BAN20408.1    CVRI01000063    CRL04475.1    LJIJ01000184    ODN00851.1    KJ577632    AIE56158.1    AAAB01008823    GACK01008298    JAA56736.1    DQ445514    ABD98752.1    KC810055    AGL94770.1    GBBL01002222    JAC25098.1    JN688261    AFI25239.1    LN830702    CFW94211.2    GQ403698    ADF45338.1    MH990499    AYV89046.1    GFWZ01000061    MBW20051.1    DQ311341    ABD36285.1    CH963894    EDW77088.1    GFWV01020246    MAA44974.1    JRES01000735    KNC28895.1    CH480816    EDW47526.1    GFJQ02000483    JAW06487.1    GEFH01004012    JAP64569.1    GBXI01009971    JAD04321.1    GAIX01003277    JAA89283.1    KR733101    AND99539.1    KC989854    AGN29627.1    APCN01001422    GEDC01009849    JAS27449.1    GFAC01006481    JAT92707.1    GECU01035687    JAS72019.1    QOIP01000010    RLU17712.1    GL732595    EFX72807.1    JX855312    AFY63434.1    GBGD01003351    JAC85538.1    KB201931    ESO93369.1    HM445737    ADO64598.1    CM000362    CM002911    EDX06727.1    KMY93138.1    NEVH01015299    PNF27284.1    GDHF01033465    GDHF01028739    GDHF01020763    JAI18849.1    JAI23575.1    JAI31551.1   

Proteomes

UP000054815    UP000076420    UP000192223    UP000268350    UP000271974    UP000085678    + More
UP000008744    UP000002358    UP000007266    UP000092553    UP000183832    UP000094527    UP000005203    UP000007798    UP000037069    UP000001292    UP000075840    UP000279307    UP000000305    UP000030746    UP000000304    UP000192221    UP000235965   

PRIDE

C6SUZ2    Q2F5T2   

Pfam

PF13499   EF-hand_7

Interpro

IPR039030   Calmodulin        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF47473   SSF47473       

CDD

cd00051  EFh

ProteinModelPortal

A0A2M4CHJ9   A0A0P6GTU5   A0A2M4CHG8   A0A2M4CI03   A0A1I9WLC8   A0A0V0XXP7   + More
T1EAD2   A0A1L8E5R9   A0A171AUZ1   A0A2M3YY20   A0A1Q3FVD0   A0A0F7VHG0   A0A2L2Y0W1   A0A0F7VHE4   A0A0P5RUR5   C6SUZ2   A0A1B1X408   A0A1D1Z6U7   A0A1Y1LBB4   A0A224XZ95   D1FQ11   A0A1L8E5P3   T1D1N0   K4IPB7   A0A023EGV4   C1BZZ7   A0A224YTS4   W8BJI6   A0A2C9K5Z2   A0A221LCA4   R4SCH1   T1IQM0   A0A1W7RAV6   H8ZM86   A0A1W4X129   A0A0P4WF35   A0A3B0J5N8   Q6WSU5   A0A0N7Z9F5   A0A3G5APF9   T1E367   A0A1E1XJF4   A0A0B7A261   A0A131Z1F6   A0A3S0ZEV4   A0A1S3H7Q1   B4G9V3   K7IWY5   Q5XUA8   D6WB91   A0A0C9QZX5   A0A034WPE0   A0A0V0G4G1   A0A023F5W8   E7D1F3   Q76LB7   A0A0M3QV58   H6SWV2   A0A346QR72   E2J7D5   R4WCV1   A0A1J1IW19   A0A1D2N6J8   A0A088AD88   A0A075F404   A0A1S4H5D0   L7LXE1   Q1W2B3   R4S154   A0A023FWI6   I1V229   A0A0F7VJD4   I6LKW0   A0A3G5ANY4   A0A2I9LNT8   Q2F5T2   B4MY99   A0A293MVX1   A0A0L0C9L1   B4HP77   A0A1Z5LGF3   A0A131XC76   A0A0A1X0D7   S4PHH1   A0A191SEJ6   R9TI07   A0A2C9GQE4   A0A1B6DP62   A0A1E1X0D7   A0A1B6HBK9   A0A3L8DC46   E9H5Z2   K9S0T9   A0A069DN97   V4BWJ9   E3UJZ8   B4QC96   A0A1W4UHE8   A0A2J7QFD1   A0A0K8TWL1  

PDB

4IL1     E-value=4.41463e-76,     Score=718

KEGG

692927    K02183 calmodulin | (RefSeq) calmodulin

PATHWAY

04070    Phosphatidylinositol signaling system - Bombyx mori (domestic silkworm)
04745    Phototransduction - fly - Bombyx mori (domestic silkworm)

GO

GO:0005509   GO:0004683   GO:0046872   GO:0035071   GO:0072499   GO:0016028   GO:0007608   GO:0030048   GO:0006468   GO:0007605   GO:0030496   GO:0016060   GO:0016061   GO:0070855   GO:2001259   GO:0031476   GO:0046716   GO:0097431   GO:0007099   GO:0051383   GO:0071361   GO:0031475   GO:0005814   GO:0016056   GO:0005813   GO:0042052   GO:0031489   GO:0019722   GO:0016021   GO:0022857   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR23050:SF379  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.22849

outside

1  -  149

 

 

Pi

20.022284

Theta

18.876476

Tajima's D

-0.936789

CLR

20.81194

CSRT

0.148442577871106

Interpretation

Uncertain