Silkworm Genome Informatics Database

Gene

KWMTBOMO13518

Pre Gene Modal

BGIBMGA001312

Annotation

PREDICTED:_tetratricopeptide_repeat_protein_7B_[Papilio_xuthus]

Location

Bomo_Chr23(-):554833-565617 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.023 Nuclear Reliability : 1.555

CDS

ATGACTTCGAAGAGTAAGAATGCCGTGCGTGGTTTTGAAACAGAGATCGACAAAAGTCGAGAGGAGGCCAACTGGAAAAAGGCTGTGGAGTTAGCTCAACAACTTAAGTCTAGATCACCTCAACATGAAAGTCTAGCACATTTCTTAATAGGAGAAGGAAAGCTTGAGGCATACCTTGATGAGTGGCCTCCCATCAAAGAAAACATAGAACGAGCTCAAAGGGAATTGTCTGAAGCCCGAGGTTATCTAACCTTAGCTACAGATGAAGCGGGGAAGAAGGCAGGAGTGGCATTAGACGCTCAGTTGTTATTAGGAAAATTGAACTATGCTTGTGGCTCATATGATGAAGCACTGAAACATTACAAATTGGCTGAATTAAACACTTTGACAGAGAAGGAGCTACCTGTACGAAGTCTGCGCATAGTGGCAGAATCCTATGCTATAAAAGGTTTTTGCCTGGAACAGAATGCTGTACCGAGTTCAACGAGTCGTTATAAGCAAGCCGAGAGGGAGGCTGAGATGATTCGCTGTTTCGAGCTAGCTTCCGACCTGACCCTGCTGTACCTACAACGCAACAGCTCAGCGCGCGCCGGCCCCACGCTGGAGACGGCCCTGCAGCGCGCCCCCATCCTGCACATCCGAGCCGGCCGGCTGCATAGCGCCATCGACAGATACCGTGAAATGTTGACCGCAGTAGAGTCTGTCTCCACTCAAGCTTTGAGGCTGACCCTCACAAGGCAGCTGGCGGAGGTGCTCCTCAGAGGGGTCACGGGACAGGTGTACAAGCCACCGGTGGCCGTGGCGCCGGCCCAGGGCACCCTGACGAGGAGGAGAGAGGATCATGTCTCCGAAGGACCGTGGAAACCAAAGAAGTATGCCGCTTTAAATCAGTTCGTGCCGCGCAACGAGCACGAGGAGGTGCTGGTGCTGGTGCTGGTGGGGGAGGCCATGGCGGCGCGGGACGGGGTGCTGTCCCAGAGCGCAGAGTTCGCCGCCGCCCGGGATCACTCGCTGCACACCGCGCTCGCGCTCATCGACCTGCTGGCGCTCGCCGCCCTGCGCTGGGGGCTGCGCCCGCTGGTGCTGGAGTCGTTAGAACGCGCCATGAAGTTCTCGTTCGGGTGCGCGCACGTGTGGCGGCAGCGCGCCCTGGCCGCGCACGCGCACGCGCAGGCGCACGCGCAGACGCACGCGCAGGCCGACGCTCGGCCGGGCGGCGGCGCGTGGGACGCCAGCGTGCGGGCGCGCGCCGTGTCGCAGCGAGCGCGCCCGCTCGTGCCGCACGACGCCGCGCTGCGCCTGGTCACCGCCAGCACGGACTACAGCACGGGCTGGATAGAGGAGGGTATAGCCATGGCGGAGGAGGCCCTGGCCATAGAGGAGGAGCAGCAGGGTCCGCTGCTGGCCCGCTGCTGTCTGTACGCCGGGATCGGTTACCAGATGAAGGCCCAGAAAACGAATTATCGTCTAGACAAAGAAGCGGCTAACGAGACGTCCCTGAAGTACCTGGTGAGGGCGGCGCAGCTGGACCCCAACGACCACCTGGCGTTCTACCACCTCGCGCTGCAGTACATGGACATGGGGATGCTCAACGAGGCGATGGATGCGACGCGATCCTGTCTGGAAGCGCGTGCTGAGTGCAGTGGCGCGCTGATAGTCGCCGCCAAACTGTGGTCATGCGCGTGCGCCGGCCGCAGGCAGACGCGCGCACTCAGCGCCGCCGCCCTCGCGCGCACGCACGCGCCGCACTCCCAGCACGCGCTCGCCACGCACGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGCACGCCCTCGCCACGCACGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGGTTAGTGCTCACGGGTACTCACGCACTGTGCGCCGCCGCGCCGCACTCCCAGCACGCGCTCGCCACGCACGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGTGCTCACGGGTACTCACGCACTGTGCGCCGCCGCGCCGCACTCCCAGCACGCGCTCGCCACGCACGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGGTTAGTGCTCACGGGTACTCACGCACTGTGCGCCGCCGCACCGCACTCCCAGCACGCCCTCGCCACGCACGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGTGCTCACGGGTACTCACGCACTGTGCGCCGCCGCGCCGCACTCCCAGCACGCGCTCGCCACGCACGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGGTTAGTGCTCACGGGTACTCACGCACTGTGCGCCGCCGCGCCGCACTCCCAGCACGCGCTCGCCACGCTCGCCGCCCTGCAGCTGCTCTGGGACACGCCCGAGGTCAGTGCTCACAGGCGGCCCTCGCGACGGGCAAGGAGCTGCTGTCCCTGTTCAGCTGCGACGCGGAGGCGGACGCGGAGGCGGGCGGGCGCGCGGAGCTGGACGCGCTGTCCGACTCGCAGCAGGACGACGCGCAGAGCGCCCGCGCCGCCGGACACTGTAGGGTTACACACCAGCCCGTAGTCATAACGGGGCACGATCAACTCTCTCGTTCAGAATACTGTAGCAAATTTAAAGTTGATACCGTATCTAGATGTAGAGGGGCAGGGACGGTTCATGGGGTTGAATGGTTGTGTCCCGCAGCGTCGGTGCGCGCGGAGATGGCGGAGGCGGGCCGCGTGGAGCGCGCGCTGTGCTCGGGCGCGTCTGGCGCGTCGGGCCGCGCGCCGCCCTCCGCGCGGGCGCAGCACCGGGCGCGCGCCTGGCTGCTGCTCGCCGACATCTGTCTGCGGTTGGATCGAGTGAGCGCGGCCGCCGGCTGCGTTGCTGAAGCGGCAGCGCTGACGCCGTACAGCCACCTAGTTTTTTACACGCGCGGGCTGGTGCACGCGGCGAGCTCGGAGTGGCTGGAGGCGCGGCTGTGCTTCCAGAACGCGCTCGCCATACATCCCACGCACCTCGATAGTCTGCTGCATTTAGGCGAGGCGTACTACCGGCTGGGCTGGCTGGGCCTGGCGGAGAAGGCGGTGCGCGAGGGCGCGGCGCTGCAGCCCGGGCGCGCCGACGCGTGGGCTCGCCTGGCGCGCGTGCTGCACGCCGCCGCCGACCCGCCCGCCGCCGCCGACGCCGCCATCGCCGCGCTGGCGCTGCACGCGCGCCGCCCCGCGCACCTCTAG

Protein

MTSKSKNAVRGFETEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLAELNTLTEKELPVRSLRIVAESYAIKGFCLEQNAVPSSTSRYKQAEREAEMIRCFELASDLTLLYLQRNSSARAGPTLETALQRAPILHIRAGRLHSAIDRYREMLTAVESVSTQALRLTLTRQLAEVLLRGVTGQVYKPPVAVAPAQGTLTRRREDHVSEGPWKPKKYAALNQFVPRNEHEEVLVLVLVGEAMAARDGVLSQSAEFAAARDHSLHTALALIDLLALAALRWGLRPLVLESLERAMKFSFGCAHVWRQRALAAHAHAQAHAQTHAQADARPGGGAWDASVRARAVSQRARPLVPHDAALRLVTASTDYSTGWIEEGIAMAEEALAIEEEQQGPLLARCCLYAGIGYQMKAQKTNYRLDKEAANETSLKYLVRAAQLDPNDHLAFYHLALQYMDMGMLNEAMDATRSCLEARAECSGALIVAAKLWSCACAGRRQTRALSAAALARTHAPHSQHALATHAALQLLWDTPEHALATHAALQLLWDTPEVSAHGYSRTVRRRAALPARARHARRPAAALGHARVLTGTHALCAAAPHSQHALATHAALQLLWDTPEVSAHGYSRTVRRRTALPARPRHARRPAAALGHARVLTGTHALCAAAPHSQHALATHAALQLLWDTPEVSAHGYSRTVRRRAALPARARHARRPAAALGHARGQCSQAALATGKELLSLFSCDAEADAEAGGRAELDALSDSQQDDAQSARAAGHCRVTHQPVVITGHDQLSRSEYCSKFKVDTVSRCRGAGTVHGVEWLCPAASVRAEMAEAGRVERALCSGASGASGRAPPSARAQHRARAWLLLADICLRLDRVSAAAGCVAEAAALTPYSHLVFYTRGLVHAASSEWLEARLCFQNALAIHPTHLDSLLHLGEAYYRLGWLGLAEKAVREGAALQPGRADAWARLARVLHAAADPPAAADAAIAALALHARRPAHL

Uniprot

NA

ProteinModelPortal

NA

PDB

6BQ1 E-value=2.55231e-53, Score=532

KEGG

101741388 K21843 tetratricopeptide repeat protein 7 | (RefSeq) tetratricopeptide repeat protein 7B-like

GO

GO:0005515 GO:0016021 GO:0022857 GO:0051536 GO:0006777 GO:0005737 GO:0048869 GO:0003676 GO:0016491 GO:0015930

Length:

1065

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19312

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00599

outside

1 - 1065

Pi

219.074284

Theta

18.892481

Tajima's D

0.604322

CLR

0.200708

CSRT

0.553172341382931

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics