Gene

KWMTBOMO13517

Pre Gene Modal

BGIBMGA001313

Annotation

PREDICTED:_organic_cation_transporter_protein-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr23(-):520453-548627      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.939

CDS

ATGACAGTAACATCGAAGGACCAGAGGAGCGGGGCCTCTGGTGGCGTAGACGTGGACCGCGTGCTCGGACAGCTGGGCCAAGCTGGGCAGTTCCACCTCAGGGTGTACGTGATGGTAGCGGTGGCGGTCATACAAGTTGGAATGTTGCACACAACCTACATCTTCTTGGCCGGAAGTGTGCCTTACAGATGCACCGTCCCGGAATGCGAATCTCTAAACACTACGGATTTTAATCCCGTTTGGTTACCGAACGCCGCGGTCGAGGGTCAGGGCGAGAGATGCTCCAGGCGCGTTCCTCTGACCCAGCCCTGCAGTGCAGACACTTCCTTCAGTCAAGAGGCACTAGCATGCGACCATTGGATTTACGCTAATAACAATACTATTGTTGCTGAGTTCAACCTCGCCTGCCAAGAGTGGAAGCGAACCCTGGTCGGAACAATCCACAACATCGGGATGCTGGTCTCTCTGCCCATACTGGGATACATCTCTGATCGGTTCGGTCGTAAAGTGGCGTTAATCCTGAGCTGTACCTTGGTGGGGGTCATCGGCACCTTGAAGGCGTTCTCGGTCTCCTACGAAATGTACGTTATTGTGGAGTTCTTGGAGACCATAGCCGGAGCTAGCACATTCCCTGCTTCGTACATTTTAACAATCGAATTACTGGGTCAAGACAAGAGGGTTCTAACGACAGCATTCCTGGGCATTGTCATCTCCATGGGAGGAGTTTGTTTTGCTCTTATGGCTAAAACCTTTCAATACTGGAGGACGTTCATCCTGGTGGTTTACCCTCCAGCTCTACTCTTCCTCTCCTACATATATTTTCTTCCTGAAAGCATAAGATGGTTGCTTTCAAAAGGAAAGAAAAAAGAAGCCATAAAGATCATAAAGAGAGCAGCAAAAATGAACAATGTAACTCTTTCTGAAGAAACCCTGAGGGAGTTGACAGAAGATAAGCCCCAGACCATGGAAGAAAAGAAGGAAATACAGAATGAGCCAGGCATATGGTCTCAAGTCATGAGATCTCCGATCATAATGAAGCGATTGGCTATTTGCTCCTGGTGGTGGATAACTTGCACCTTCGTATTCTACGGACTGGCGATCAACTCTGTTTCTCTTGCCGGAGACAAGTACACTAACTACATGCTAGTTGTGAGCGTGGAAGTGATCGGCGTGGTCATCAACGCTTTGGTTCTGGACAGGATCGGCAGGAAGAGATCTTTACTCATCGGTTTTATGGTCTGCGGGGTTTCTTGCTGCGCGATTCCGTTTGTCCGTAATCATATAGTTTGGCTGTCCATATTTTTGTACCTGCTAGGGAAGGTCGCCATCACTCAGGCCTTCAACGGCATCTACATGTACACGTCGGAGTTGTTCCCGACCCGCGCCAGACACTCGCTGCTGGCCTTCTGCTCGATGGTCGGCAGGATCGGGTCCATTGTTGCACCGCAGATGCCTTTACTGGAGATCTACGTAAAATGGTTGCCGTCAGTGTTGTTCGGCTGTACAGCCCTCGTGGCCGGGCTGCTCATGACCACCACACCCGAGACCCTCAACACGACCCTCCCCGACACCATACAGGAGGCGGAGCAGATCGCAACACGACACAGAGAGCCGCACAAGTCGAAAGAAATACAATCGACTCCCTGTTGA

Protein

MTVTSKDQRSGASGGVDVDRVLGQLGQAGQFHLRVYVMVAVAVIQVGMLHTTYIFLAGSVPYRCTVPECESLNTTDFNPVWLPNAAVEGQGERCSRRVPLTQPCSADTSFSQEALACDHWIYANNNTIVAEFNLACQEWKRTLVGTIHNIGMLVSLPILGYISDRFGRKVALILSCTLVGVIGTLKAFSVSYEMYVIVEFLETIAGASTFPASYILTIELLGQDKRVLTTAFLGIVISMGGVCFALMAKTFQYWRTFILVVYPPALLFLSYIYFLPESIRWLLSKGKKKEAIKIIKRAAKMNNVTLSEETLRELTEDKPQTMEEKKEIQNEPGIWSQVMRSPIIMKRLAICSWWWITCTFVFYGLAINSVSLAGDKYTNYMLVVSVEVIGVVINALVLDRIGRKRSLLIGFMVCGVSCCAIPFVRNHIVWLSIFLYLLGKVAITQAFNGIYMYTSELFPTRARHSLLAFCSMVGRIGSIVAPQMPLLEIYVKWLPSVLFGCTALVAGLLMTTTPETLNTTLPDTIQEAEQIATRHREPHKSKEIQSTPC

Uniprot

H9IVN2   A0A2A4K7E3   A0A2W1BRJ1   A0A2H1VA76   A0A2A4K5R4   A0A194PT22   + More
A0A212EJ20   A0A3S2M6B8   A0A3S2NIQ2   A0A194RE15   A0A2A4K7E5   A0A2H1V9B3   A0A3S2NA23   A0A2A4K6M9   A0A212F848   A0A2A4K5P1   A0A0L7KUG4   A0A3S2NDN7   A0A212FPC5   A0A212EH35   A0A194QDP3   A0A2A4J6J0   A0A2H1VFS1   A0A194RGD2   A0A3S2L3J0   A0A0N1PI45   A0A0L7LKI8   A0A2A4JC88   A0A194PJI6   A0A2H1V1L3   H9JI53   A0A212F158   A0A194QC91   A0A3S2TCP3   A0A182QUL1   A0A0L7KWH4   B0XDF1   A0A2J7RPY7   A0A2J7RPY0   A0A194QI00   H9JI54   A0A212EMB5   A0A195DF58   B0XDE9   A0A182KSD5   A0A194RIS2   U5EVF0   A0A212F2Q3   A0A194RF43   E2A7K4   H9IWG7   A0A212F123   A0A182MYV4   A0A084WCB2   A0A195CVD4   A0A182GYP2   A0A067RSY2   Q16WK7   A0A0L7KV39   A0A0V0GBF3   A0A0L7RIG1   A0A2H1V9D8   A0A154PCE9   A0A158P2C5   F4WUN7   A0A194RFK1   A0A2A4J5Q3   A0A195D353   A0A151WZG1   A0A182RFF8   A0A194REW9   A0A195E462   A0A0N1IEC9   A0A212EJ24   V9ICM7   A0A151WZE2   A0A2A3E3H4   A0A026W5E8   A0A212F2F2   A0A158NQD1   H9JI37   A0A3L8D7U5   A0A088AAF9   A0A194PR44   A0A1L8DEQ3   A0A2A4J455   A0A1L8DEI6   F4WUN6   A0A182WZR9   A0A3S2NQS4   A0A1B6D578   A0A3S2NPR2   A0A2H1VQS6   A0A194RE10   A0A182WEZ8   A0A195FIT4   A0A212EIZ7   A0A2A4K5Q2   A0A151WY09  

Pubmed

19121390    28756777    26354079    22118469    26227816    20966253    + More
20798317    24438588    26483478    24845553    17510324    21347285    21719571    24508170    30249741   

EMBL

BABH01039623    NWSH01000100    PCG79570.1    KZ149964    PZC76264.1    ODYU01001220    + More
SOQ37134.1    PCG79571.1    KQ459595    KPI95914.1    AGBW02014542    OWR41475.1    RSAL01000027    RVE51971.1    RSAL01000974    RVE41008.1    KQ460313    KPJ16073.1    PCG79572.1    ODYU01001366    SOQ37440.1    RSAL01000360    RVE42197.1    PCG79564.1    AGBW02009797    OWR49901.1    PCG79565.1    JTDY01005496    KOB66937.1    RSAL01000186    RVE44804.1    AGBW02003000    OWR55596.1    AGBW02014973    OWR40799.1    KQ459193    KPJ03085.1    NWSH01002815    PCG67489.1    ODYU01002328    SOQ39679.1    KQ460205    KPJ16878.1    RVE44802.1    KQ459762    KPJ20130.1    JTDY01000842    KOB75696.1    NWSH01002161    PCG69013.1    KQ459606    KPI91250.1    ODYU01000079    SOQ34232.1    BABH01041117    BABH01041118    AGBW02010973    OWR47451.1    KPJ03082.1    RVE42200.1    AXCN02001021    JTDY01005018    KOB67470.1    DS232756    EDS45429.1    NEVH01001354    PNF42889.1    PNF42891.1    KPJ03081.1    BABH01041119    AGBW02013857    OWR42632.1    KQ980905    KYN11533.1    EDS45427.1    KQ460325    KPJ15841.1    GANO01001906    JAB57965.1    AGBW02010692    OWR48028.1    KPJ16069.1    GL437348    EFN70576.1    BABH01006647    OWR47448.1    ATLV01022651    KE525335    KFB47856.1    KQ977259    KYN04595.1    JXUM01021216    KQ560594    KXJ81736.1    KK852482    KDR22929.1    CH477563    EAT38951.1    KOB66936.1    GECL01000840    JAP05284.1    KQ414585    KOC70516.1    SOQ37439.1    KQ434870    KZC09576.1    ADTU01007112    GL888375    EGI62034.1    KPJ16075.1    NWSH01003151    PCG66854.1    KQ976885    KYN07327.1    KQ982639    KYQ53259.1    KPJ15840.1    KQ979657    KYN19975.1    KQ460941    KPJ10576.1    OWR41479.1    JR038305    AEY58206.1    KYQ53258.1    KZ288444    PBC25689.1    KK107403    EZA51300.1    AGBW02010753    OWR47904.1    ADTU01001734    BABH01041187    BABH01041188    QOIP01000011    RLU16525.1    KPI95921.1    GFDF01009227    JAV04857.1    PCG66855.1    GFDF01009228    JAV04856.1    EGI62033.1    RVE42198.1    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    RSAL01000015    RVE53128.1    ODYU01003881    SOQ43193.1    KPJ16068.1    KQ981523    KYN40281.1    AGBW02014543    OWR41473.1    PCG79557.1    KQ982662    KYQ52637.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000283053    UP000053240    + More
UP000037510    UP000075886    UP000002320    UP000235965    UP000078492    UP000075882    UP000000311    UP000075884    UP000030765    UP000078542    UP000069940    UP000249989    UP000027135    UP000008820    UP000053825    UP000076502    UP000005205    UP000007755    UP000075809    UP000075900    UP000242457    UP000053097    UP000279307    UP000005203    UP000076407    UP000075920    UP000078541   

PRIDE

H9IVN2    H9JI53    H9JI54    H9IWG7    H9JI37   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR020846   MFS_dom        + More
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9IVN2   A0A2A4K7E3   A0A2W1BRJ1   A0A2H1VA76   A0A2A4K5R4   A0A194PT22   + More
A0A212EJ20   A0A3S2M6B8   A0A3S2NIQ2   A0A194RE15   A0A2A4K7E5   A0A2H1V9B3   A0A3S2NA23   A0A2A4K6M9   A0A212F848   A0A2A4K5P1   A0A0L7KUG4   A0A3S2NDN7   A0A212FPC5   A0A212EH35   A0A194QDP3   A0A2A4J6J0   A0A2H1VFS1   A0A194RGD2   A0A3S2L3J0   A0A0N1PI45   A0A0L7LKI8   A0A2A4JC88   A0A194PJI6   A0A2H1V1L3   H9JI53   A0A212F158   A0A194QC91   A0A3S2TCP3   A0A182QUL1   A0A0L7KWH4   B0XDF1   A0A2J7RPY7   A0A2J7RPY0   A0A194QI00   H9JI54   A0A212EMB5   A0A195DF58   B0XDE9   A0A182KSD5   A0A194RIS2   U5EVF0   A0A212F2Q3   A0A194RF43   E2A7K4   H9IWG7   A0A212F123   A0A182MYV4   A0A084WCB2   A0A195CVD4   A0A182GYP2   A0A067RSY2   Q16WK7   A0A0L7KV39   A0A0V0GBF3   A0A0L7RIG1   A0A2H1V9D8   A0A154PCE9   A0A158P2C5   F4WUN7   A0A194RFK1   A0A2A4J5Q3   A0A195D353   A0A151WZG1   A0A182RFF8   A0A194REW9   A0A195E462   A0A0N1IEC9   A0A212EJ24   V9ICM7   A0A151WZE2   A0A2A3E3H4   A0A026W5E8   A0A212F2F2   A0A158NQD1   H9JI37   A0A3L8D7U5   A0A088AAF9   A0A194PR44   A0A1L8DEQ3   A0A2A4J455   A0A1L8DEI6   F4WUN6   A0A182WZR9   A0A3S2NQS4   A0A1B6D578   A0A3S2NPR2   A0A2H1VQS6   A0A194RE10   A0A182WEZ8   A0A195FIT4   A0A212EIZ7   A0A2A4K5Q2   A0A151WY09  

PDB

4LDS     E-value=0.000101222,     Score=110

KEGG

101741247    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0016021   GO:0022857   GO:0055085   GO:0005215   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

549

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

243.54203

Exp number, first 60 AAs:

22.43289

Total prob of N-in:

0.92056

POSSIBLE N-term signal

sequence

inside

1  -  34

TMhelix

35  -  57

outside

58  -  143

TMhelix

144  -  163

inside

164  -  169

TMhelix

170  -  192

outside

193  -  195

TMhelix

196  -  218

inside

219  -  230

TMhelix

231  -  248

outside

249  -  252

TMhelix

253  -  275

inside

276  -  347

TMhelix

348  -  370

outside

371  -  379

TMhelix

380  -  398

inside

399  -  404

TMhelix

405  -  424

outside

425  -  428

TMhelix

429  -  451

inside

452  -  488

TMhelix

489  -  511

outside

512  -  549

 

 

Pi

145.74172

Theta

133.967626

Tajima's D

0.260233

CLR

0.447458

CSRT

0.440777961101945

Interpretation

Uncertain