Gene

KWMTBOMO13516

Pre Gene Modal

BGIBMGA001314

Annotation

PREDICTED:_TWiK_family_of_potassium_channels_protein_7-like_[Papilio_polytes]

Location

Bomo_Chr23(-):510603-517937      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.824

CDS

ATGTCTCGGCGTGAACTGAGGAGTGATAGGATTGAGTACCCGGCGCCTCCGCCTAGCAAATGTGCGAAATTCCTATACTACACGTGGAAGCTATGTTCGGTGGTTTTCTCGCACTTCGTGATGATCAGCCTGGTCGTGGCTTACTGCATCCTCGGAGCCGTCATCTTCGAGAAGCTGGAAGCGGAGCACGAGAAAGATGTCAAGATGAATATATCACAAATACGGAAGAACACTACCCAGAGCATCTGGACCATGACCAAGAGCGTGCCACTGTTCAACCACACGAACTGGACTTCCTCCACTGTTGACATGCTGAAGGACTTCGAGAACGCCATACTCCTGGAGATGAAGGTCCGTGGCTGGGACGGGAACGAGAGCACACACCACATACAGTGGACGTTCACCGGGGCCCTCTTCTACTCCATCATCGTCATCACTACCATCGCTGGTTACAGTGCCATCGTAGTCTACGAATTCTCCATTGAATACAAACCAGGACTATCTGGACACACAGCTTCAGTAGCTATCTTACGGTGA

Protein

MSRRELRSDRIEYPAPPPSKCAKFLYYTWKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHEKDVKMNISQIRKNTTQSIWTMTKSVPLFNHTNWTSSTVDMLKDFENAILLEMKVRGWDGNESTHHIQWTFTGALFYSIIVITTIAGYSAIVVYEFSIEYKPGLSGHTASVAILR

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.

Uniprot

H9IVN3   A0A2W1BWY8   A0A2A4K737   A0A194RER8   A0A194PXN9   A0A212EJ14   + More
A0A0L7LRJ0   A0A0C9QHJ2   A0A1B6CML0   A0A182NN90   A0A310SD75   A0A195FTQ6   N6U5W4   A0A182QF68   E2C7C9   W5JQW8   A0A182FLS4   E2AQ11   A0A195DCG2   A0A3L8DT76   A0A026WB45   Q7PMT6   A0A151WFD8   A7UUW4   A7UUW3   A0A1B6DQF0   D6WYQ0   A0A0L7RCD9   A0A195BDB2   E0VS97   A0A067QUY6   A0A1B6IXA6   A0A2J7RES5   A0A1B6K8R8   A0A2J7RES4   A0A0N1IT85   A0A2A3E4T7   A0A087ZY41   A0A154P847   E9IXY3   A0A1W4WHW8   A0A2R7WNK0   A0A1J1HYW1   A0A1Y1KMN8   A0A0T6BG50   A0A2H8U0U4   A0A1D2MWV5   J9JZ01   A0A1B0D312   A0A1I8MGT9   A0A0N8E257   B4J2F7   A0A0P5IIW8   A0A0P5KM49   A0A0N8CB33   A0A0P4YET1   A0A0N8E784   A0A0P6GSI4   A0A0L0CTF0   A0A0P6IBU3   W8C299   A0A0K8UM32   A0A0K8U608   A0A0K2T4A6   A0A034V5F2   A0A0P5Y5N5   A0A1D2MQY7   A0A0P5TDB9   A0A0P4XPD6   A0A0P6A9U5   A0A0P6AD08   A0A0P6A591   A0A0K8W160   A0A164YXT0   A0A0P6BU32   A0A1B0A2G8   A0A1A9VMX1   A0A1I8QBY0   A0A1A9YN22   W8BRH7   A0A1A9W4L5   L7MMU3   B7Q5H0   B3M538   Q29EU9   B4H5J5   Q6NR05   B3NJG5   B4HVP9   B4QLY2   Q9W0J0   A0A3B0KLS6   B4PD53   A6MT93   A6MTA2   A6MT91   A6MTA1   A6MTA9  

Pubmed

19121390    28756777    26354079    22118469    26227816    23537049    + More
20798317    20920257    23761445    30249741    24508170    12364791    14747013    17210077    18362917    19820115    20566863    24845553    21282665    28004739    27289101    25315136    17994087    26108605    24495485    25348373    25576852    15632085    23185243    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    17614914   

EMBL

BABH01039623    KZ149964    PZC76263.1    NWSH01000100    PCG79573.1    KQ460313    + More
KPJ16072.1    KQ459595    KPI95915.1    AGBW02014542    OWR41476.1    JTDY01000245    KOB78075.1    GBYB01014108    JAG83875.1    GEDC01022673    JAS14625.1    KQ769179    OAD52906.1    KQ981264    KYN44000.1    APGK01047721    KB741087    KB632378    ENN73967.1    ERL94081.1    AXCN02001900    AXCN02001901    GL453369    EFN76116.1    ADMH02000431    ETN66511.1    GL441645    EFN64498.1    KQ980989    KYN10573.1    QOIP01000005    RLU22968.1    KK107293    EZA53322.1    AAAB01008968    EAA13222.5    KQ983219    KYQ46544.1    EDO63515.1    EDO63516.1    GEDC01009396    JAS27902.1    KQ971357    EFA08413.1    KQ414616    KOC68465.1    KQ976519    KYM82184.1    DS235747    EEB16253.1    KK853235    KDR09564.1    GECU01016153    JAS91553.1    NEVH01004944    PNF39338.1    GEBQ01032145    JAT07832.1    PNF39339.1    KQ435847    KOX71128.1    KZ288369    PBC26763.1    KQ434839    KZC08023.1    GL766836    EFZ14554.1    KK855155    PTY21196.1    CVRI01000021    CRK91726.1    GEZM01081919    JAV61480.1    LJIG01000612    KRT86328.1    GFXV01007213    MBW19018.1    LJIJ01000442    ODM97438.1    ABLF02040359    AJVK01010818    GDIQ01069212    JAN25525.1    CH916366    EDV96016.1    GDIQ01220797    JAK30928.1    GDIQ01183364    JAK68361.1    GDIQ01197048    GDIQ01097195    JAL54531.1    GDIP01231232    JAI92169.1    GDIQ01054996    JAN39741.1    GDIQ01029272    JAN65465.1    JRES01000036    KNC34674.1    GDIQ01023213    JAN71524.1    GAMC01010696    JAB95859.1    GDHF01024582    JAI27732.1    GDHF01030281    JAI22033.1    HACA01003279    CDW20640.1    GAKP01021942    GAKP01021940    JAC37010.1    GDIP01063806    JAM39909.1    LJIJ01000657    ODM95529.1    GDIP01128084    JAL75630.1    GDIP01238530    JAI84871.1    GDIP01037210    JAM66505.1    GDIP01036049    JAM67666.1    GDIP01034763    JAM68952.1    GDHF01028109    GDHF01007432    JAI24205.1    JAI44882.1    LRGB01000868    KZS15717.1    GDIP01009880    JAM93835.1    GAMC01010698    GAMC01010694    JAB95861.1    GACK01000175    JAA64859.1    ABJB010122699    ABJB010123767    ABJB010206346    ABJB010208733    ABJB010630681    ABJB010874753    ABJB010926846    ABJB010940883    ABJB011075318    DS861350    EEC14092.1    CH902618    EDV39517.1    CH379070    EAL29961.1    KRT08518.1    CH479211    EDW33047.1    BT010279    AAQ23597.1    CH954178    EDV50127.1    CH480817    EDW50014.1    CM000363    CM002912    EDX08768.1    KMY96770.1    AE014296    BT050451    AAF47456.1    ACJ13158.1    OUUW01000009    SPP84768.1    CM000159    EDW92801.1    EF436834    EF436837    EF436845    ABR14430.1    ABR14433.1    ABR14441.1    EF436843    ABR14439.1    EF436832    EF436835    EF436836    EF436838    EF436839    EF436840    EF436841    EF436844    EF436846    EF436847    EF436848    EF436849    ABR14428.1    ABR14431.1    ABR14432.1    ABR14434.1    ABR14435.1    ABR14436.1    ABR14437.1    ABR14440.1    ABR14442.1    ABR14443.1    ABR14444.1    ABR14445.1    EF436842    ABR14438.1    EF436850    EF436851    EF436852    EF436854    EF436855    EF436856    EF436857    EF436858    EF436859    EF436860    EF436861    EF436862    ABR14446.1    ABR14447.1    ABR14448.1    ABR14450.1    ABR14451.1    ABR14452.1    ABR14453.1    ABR14454.1    ABR14455.1    ABR14456.1    ABR14457.1    ABR14458.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000075884    UP000078541    UP000019118    UP000030742    UP000075886    UP000008237    UP000000673    UP000069272    UP000000311    UP000078492    UP000279307    UP000053097    UP000007062    UP000075809    UP000007266    UP000053825    UP000078540    UP000009046    UP000027135    UP000235965    UP000053105    UP000242457    UP000005203    UP000076502    UP000192223    UP000183832    UP000094527    UP000007819    UP000092462    UP000095301    UP000001070    UP000037069    UP000076858    UP000092445    UP000078200    UP000095300    UP000092443    UP000091820    UP000001555    UP000007801    UP000001819    UP000008744    UP000008711    UP000001292    UP000000304    UP000000803    UP000268350    UP000002282   

PRIDE

H9IVN3    Q6NR05    Q9W0J0   

Pfam

PF07885   Ion_trans_2

Interpro

IPR013099   K_chnl_dom        + More
IPR003280   2pore_dom_K_chnl       

ProteinModelPortal

H9IVN3   A0A2W1BWY8   A0A2A4K737   A0A194RER8   A0A194PXN9   A0A212EJ14   + More
A0A0L7LRJ0   A0A0C9QHJ2   A0A1B6CML0   A0A182NN90   A0A310SD75   A0A195FTQ6   N6U5W4   A0A182QF68   E2C7C9   W5JQW8   A0A182FLS4   E2AQ11   A0A195DCG2   A0A3L8DT76   A0A026WB45   Q7PMT6   A0A151WFD8   A7UUW4   A7UUW3   A0A1B6DQF0   D6WYQ0   A0A0L7RCD9   A0A195BDB2   E0VS97   A0A067QUY6   A0A1B6IXA6   A0A2J7RES5   A0A1B6K8R8   A0A2J7RES4   A0A0N1IT85   A0A2A3E4T7   A0A087ZY41   A0A154P847   E9IXY3   A0A1W4WHW8   A0A2R7WNK0   A0A1J1HYW1   A0A1Y1KMN8   A0A0T6BG50   A0A2H8U0U4   A0A1D2MWV5   J9JZ01   A0A1B0D312   A0A1I8MGT9   A0A0N8E257   B4J2F7   A0A0P5IIW8   A0A0P5KM49   A0A0N8CB33   A0A0P4YET1   A0A0N8E784   A0A0P6GSI4   A0A0L0CTF0   A0A0P6IBU3   W8C299   A0A0K8UM32   A0A0K8U608   A0A0K2T4A6   A0A034V5F2   A0A0P5Y5N5   A0A1D2MQY7   A0A0P5TDB9   A0A0P4XPD6   A0A0P6A9U5   A0A0P6AD08   A0A0P6A591   A0A0K8W160   A0A164YXT0   A0A0P6BU32   A0A1B0A2G8   A0A1A9VMX1   A0A1I8QBY0   A0A1A9YN22   W8BRH7   A0A1A9W4L5   L7MMU3   B7Q5H0   B3M538   Q29EU9   B4H5J5   Q6NR05   B3NJG5   B4HVP9   B4QLY2   Q9W0J0   A0A3B0KLS6   B4PD53   A6MT93   A6MTA2   A6MT91   A6MTA1   A6MTA9  

PDB

4TWK     E-value=0.0604829,     Score=80

KEGG

NA   

GO

GO:0016021   GO:0005267   GO:0006811   GO:0022841   GO:0071805   GO:0005887   GO:0030322  

Length:

178

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.57824

Exp number, first 60 AAs:

22.92462

Total prob of N-in:

0.87591

POSSIBLE N-term signal

sequence

inside

1  -  33

TMhelix

34  -  56

outside

57  -  131

TMhelix

132  -  154

inside

155  -  178

 

 

Pi

184.14276

Theta

138.277884

Tajima's D

1.165645

CLR

0.121115

CSRT

0.708414579271036

Interpretation

Uncertain