Gene

KWMTBOMO13511

Pre Gene Modal

BGIBMGA009195

Annotation

PREDICTED:_organic_cation_transporter_protein-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr23(-):429430-444507      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.892

CDS

ATGGAAGATCGAACGAAAAACGCCAACGGCGACATAGAAGATGAAGGCGCCAAGCAGAAGGTGAATCTAGACACCATCCTAATTGAAGAGCTGGGACAGTTCGGCTGGTTCCAGCTGAGGACCGTGATCTTGGCTGCCATCATGGTGATCTTCGCTGCTTGGGGAGCCAGTGAGTTCATATTTACCACCGCCAGGATCAGTTCAAGATGCCTGATCCCGGAATGCGAACTGGCTTCAAACACCGTCTTCGCTCCGGAATGGAAGCCCAACGCCATCCCGGCGACCAGCTCCGGATTCGACAACTGCTTTCGTTTCGAGAACGCCACTAGAAGACCAGACGTGATCGGCGACACCTGCCCCGCCACCTTGTTCAATCGGGAGAGGGTTGTCGGCTGCGACTCATTCGTCTATCAGAACACAGACACGGTCGTGTACGATTACGACCTCGCTTGTGACGAATGGCGTCGCACCCTGATAGGATCTATCCGTACTTTGGGAACTCTAATGGCCCTGCCCATCACCGGCTACATCTCCGACCGCTGGGGCCGAAGGATCGCTCTGACCATGAACGCCTTCAACACGGCGTGGCTGGGCGCCACCAGATATTTTGCCGGCACGTACATAGGCTTCACTATATCTGAATTCGCGGAGGCTATGTTTGGGTCCGCTGGATTTTCTTGTGCCTACATTTTGCTGATGGAAATCGTTGGTCCGAAGTACCGGGTAGCAGCTGGTGCGACAATGAACACCTTCTTCTCAATCGGTCAGATAACCATGGGCCTCATCGCTTGGGCTGTCCCAAACTGGAGAATGTTCACCCTCGCCCTCTATCTTCCTCAACTATTTACCATCTCATACTTATGGATCATGACTGAATCCATCCGGTGGTACATGAGTAAAGGAAGATACGAAGAATCTGAAGCGTTGTTAAAGAAGATAGCTAAAGTTAATAAAAAGCAGTTGTCTGATAAATCTCTGGTGGCGCTGAGGGAAACCGCTGAAGAAGAAAAGAAAAAGCAAGCATTAGAACAAGCCGAGCGAGTCAACGAGCCCTGGTTGATAGTTCAAGTATTTAGACATAAGAAAATTCTGATTAGATGTATCGTGTCTCCGGTCTGGTGGATAACAAATACTTTTGTTTACTATGGCCTTTCCATCAATGCTGTGAACATGTCAGGAAATAGACATCTAAACTACATTGCAGTGGCGGCTGCTGATATTCCTGGTTATTGGTCCGCCGTGTTTCTGATGGCCAAGATAGGCAGAAAGCCGGTATTGATTGGGGCTTTCTGGATATGCGCTGCCTGTCAGCTTGGATACATATTTATGCCGGACGGTTTATACGGAGCCTCCCTAGCGCTGTACCTGATTGGCAAGTTCAGTATAGCGATGGTAATGACCTCGGTTTACGTGTACACCGCCGAGTTATATCCCACCAAATATAGACACAGTCTGTTCGCCTTTTCTTCGATGATGGGCAGGATTGGATCCATTACTGCACCTTTGACTCCTGCATTTGGAGCGGCAACGTTTGACGACATGCCCTTTGTCCTATTCGCAAGTTTCGCTCTTTTATCTGGTGCCCTGATCTTCCTCACCCCCGAGACCCTCGGTACCACGCTGCCTGACACCATGGAGCAGGCTTCCGAAATCGGACAGAAGAAAGAAGAAGAGAAAATATAA

Protein

MEDRTKNANGDIEDEGAKQKVNLDTILIEELGQFGWFQLRTVILAAIMVIFAAWGASEFIFTTARISSRCLIPECELASNTVFAPEWKPNAIPATSSGFDNCFRFENATRRPDVIGDTCPATLFNRERVVGCDSFVYQNTDTVVYDYDLACDEWRRTLIGSIRTLGTLMALPITGYISDRWGRRIALTMNAFNTAWLGATRYFAGTYIGFTISEFAEAMFGSAGFSCAYILLMEIVGPKYRVAAGATMNTFFSIGQITMGLIAWAVPNWRMFTLALYLPQLFTISYLWIMTESIRWYMSKGRYEESEALLKKIAKVNKKQLSDKSLVALRETAEEEKKKQALEQAERVNEPWLIVQVFRHKKILIRCIVSPVWWITNTFVYYGLSINAVNMSGNRHLNYIAVAAADIPGYWSAVFLMAKIGRKPVLIGAFWICAACQLGYIFMPDGLYGASLALYLIGKFSIAMVMTSVYVYTAELYPTKYRHSLFAFSSMMGRIGSITAPLTPAFGAATFDDMPFVLFASFALLSGALIFLTPETLGTTLPDTMEQASEIGQKKEEEKI

Uniprot

A0A194RE10   A0A194PT27   A0A0L7K3V5   A0A3S2LQC2   A0A2H1VQC6   A0A2A4K663   + More
A0A2H1VQB3   A0A2H1VCJ6   A0A2W1BLR2   A0A2W1BHB5   A0A2A4JH68   A0A2H1VAT9   A0A2A4JIA3   A0A2W1BSR9   A0A2H1VSF4   A0A2A4K6L7   A0A194RF43   A0A2W1BMV0   A0A0L7KTW1   A0A3S2L9U7   A0A2A4K5Q2   A0A2W1BMH3   A0A0L7KVH9   A0A0L7KTQ3   H9JI48   A0A212EJ24   A0A194PSH3   A0A0L7K4R7   A0A2A4J6J0   A0A3S2TCP3   A0A194PJI6   A0A194RJF2   A0A0L7KWH4   A0A194RGD2   A0A194PR44   A0A194PRI3   H9JI54   H9JI53   A0A212F123   A0A3S2NQS4   A0A0L7KV39   A0A2W1BRL6   A0A2A4K5Q3   A0A194RF38   A0A2H1V9D8   A0A212EMB5   A0A212F124   A0A3S2NA23   A0A0L7KZ57   A0A2H1V9B3   H9JI52   A0A212F848   A0A3S2M6B8   A0A212F137   A0A0L0CC92   A0A067RSY2   A0A3S2NIQ2   A0A2A4K6M9   A0A212FPC5   A0A212EJ20   A0A2A4K5P1   A0A182GYP2   A0A2A4K5R4   A0A2J7RPZ7   A0A182SYI8   A0A3S2NDN7   Q16WK7   A0A195E542   A0A2A4K7E3   A0A194QDP3   A0A0L7LKI8   A0A182QUL1   A0A0K8UFN6   A0A0K8UAY5   A0A2W1BRJ1   A0A0L7KUG4   A0A2H1VA76   A0A0K8VEY5   A0A1B0DMI4   A0A151WZG1   B0XDF1   A0A194PT22   A0A182KSD5   A0A182LZQ5   A0A182Y1J3   A0A0K8VUC5   A0A2A4J5Q3   A0A1L8DEQ3   A0A034WIX2   A0A1L8DEI6   A0A2J7RPY0   A0A2J7RPY7   J3JWW6   A0A3S2L3J0   A0A2J7RPY4   A0A1Y1KD84   A0A0A1WIH3   Q7Q0C3  

Pubmed

26354079    26227816    28756777    19121390    22118469    26108605    + More
24845553    26483478    17510324    20966253    25244985    25348373    22516182    23537049    28004739    25830018    12364791    14747013    17210077   

EMBL

KQ460313    KPJ16068.1    KQ459595    KPI95919.1    JTDY01011376    KOB56709.1    + More
RSAL01000360    RVE42202.1    ODYU01003788    SOQ42986.1    NWSH01000100    PCG79559.1    SOQ42987.1    ODYU01001566    SOQ37954.1    KZ150061    PZC74227.1    PZC74228.1    NWSH01001466    PCG71159.1    SOQ37955.1    PCG71160.1    KZ149964    PZC76257.1    ODYU01004183    SOQ43775.1    PCG79558.1    KPJ16069.1    PZC76258.1    JTDY01005909    KOB66489.1    RVE42203.1    PCG79557.1    PZC76259.1    JTDY01005309    KOB67130.1    KOB66490.1    BABH01041122    AGBW02014542    OWR41479.1    KPI95918.1    JTDY01010709    KOB58080.1    NWSH01002815    PCG67489.1    RVE42200.1    KQ459606    KPI91250.1    KPJ16066.1    JTDY01005018    KOB67470.1    KQ460205    KPJ16878.1    KPI95921.1    KPI95922.1    BABH01041118    BABH01041119    BABH01041117    AGBW02010973    OWR47448.1    RVE42198.1    JTDY01005496    KOB66936.1    PZC76255.1    PCG79561.1    KPJ16064.1    ODYU01001366    SOQ37439.1    AGBW02013857    OWR42632.1    OWR47449.1    RVE42197.1    JTDY01004270    KOB68356.1    SOQ37440.1    BABH01041114    AGBW02009797    OWR49901.1    RSAL01000027    RVE51971.1    OWR47450.1    JRES01000704    KNC29064.1    KK852482    KDR22929.1    RSAL01000974    RVE41008.1    PCG79564.1    AGBW02003000    OWR55596.1    OWR41475.1    PCG79565.1    JXUM01021216    KQ560594    KXJ81736.1    PCG79571.1    NEVH01001354    PNF42898.1    RSAL01000186    RVE44804.1    CH477563    EAT38951.1    KQ979657    KYN19974.1    PCG79570.1    KQ459193    KPJ03085.1    JTDY01000842    KOB75696.1    AXCN02001021    GDHF01026931    GDHF01013660    GDHF01009296    JAI25383.1    JAI38654.1    JAI43018.1    GDHF01028477    JAI23837.1    PZC76264.1    KOB66937.1    ODYU01001220    SOQ37134.1    GDHF01014878    JAI37436.1    AJVK01006968    KQ982639    KYQ53259.1    DS232756    EDS45429.1    KPI95914.1    AXCM01003135    GDHF01009833    JAI42481.1    NWSH01003151    PCG66854.1    GFDF01009227    JAV04857.1    GAKP01005259    JAC53693.1    GFDF01009228    JAV04856.1    PNF42891.1    PNF42889.1    APGK01035527    APGK01035528    BT127734    KB740927    KB631762    AEE62696.1    ENN78004.1    ERL85926.1    RVE44802.1    PNF42897.1    GEZM01087818    JAV58458.1    GBXI01016094    JAC98197.1    AAAB01008986    EAA00192.3   

Proteomes

UP000053240    UP000053268    UP000037510    UP000283053    UP000218220    UP000005204    + More
UP000007151    UP000037069    UP000027135    UP000069940    UP000249989    UP000235965    UP000075901    UP000008820    UP000078492    UP000075886    UP000092462    UP000075809    UP000002320    UP000075882    UP000075883    UP000076408    UP000019118    UP000030742    UP000007062   

PRIDE

H9JI48    H9JI54    H9JI53    H9JI52   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       
IPR036769   Ribosomal_L11_C_sf       
IPR020785   Ribosomal_L11_CS       

SUPFAM

SSF103473   SSF103473       

Gene 3D

1.10.10.250    

CDD

cd06174  MFS

ProteinModelPortal

A0A194RE10   A0A194PT27   A0A0L7K3V5   A0A3S2LQC2   A0A2H1VQC6   A0A2A4K663   + More
A0A2H1VQB3   A0A2H1VCJ6   A0A2W1BLR2   A0A2W1BHB5   A0A2A4JH68   A0A2H1VAT9   A0A2A4JIA3   A0A2W1BSR9   A0A2H1VSF4   A0A2A4K6L7   A0A194RF43   A0A2W1BMV0   A0A0L7KTW1   A0A3S2L9U7   A0A2A4K5Q2   A0A2W1BMH3   A0A0L7KVH9   A0A0L7KTQ3   H9JI48   A0A212EJ24   A0A194PSH3   A0A0L7K4R7   A0A2A4J6J0   A0A3S2TCP3   A0A194PJI6   A0A194RJF2   A0A0L7KWH4   A0A194RGD2   A0A194PR44   A0A194PRI3   H9JI54   H9JI53   A0A212F123   A0A3S2NQS4   A0A0L7KV39   A0A2W1BRL6   A0A2A4K5Q3   A0A194RF38   A0A2H1V9D8   A0A212EMB5   A0A212F124   A0A3S2NA23   A0A0L7KZ57   A0A2H1V9B3   H9JI52   A0A212F848   A0A3S2M6B8   A0A212F137   A0A0L0CC92   A0A067RSY2   A0A3S2NIQ2   A0A2A4K6M9   A0A212FPC5   A0A212EJ20   A0A2A4K5P1   A0A182GYP2   A0A2A4K5R4   A0A2J7RPZ7   A0A182SYI8   A0A3S2NDN7   Q16WK7   A0A195E542   A0A2A4K7E3   A0A194QDP3   A0A0L7LKI8   A0A182QUL1   A0A0K8UFN6   A0A0K8UAY5   A0A2W1BRJ1   A0A0L7KUG4   A0A2H1VA76   A0A0K8VEY5   A0A1B0DMI4   A0A151WZG1   B0XDF1   A0A194PT22   A0A182KSD5   A0A182LZQ5   A0A182Y1J3   A0A0K8VUC5   A0A2A4J5Q3   A0A1L8DEQ3   A0A034WIX2   A0A1L8DEI6   A0A2J7RPY0   A0A2J7RPY7   J3JWW6   A0A3S2L3J0   A0A2J7RPY4   A0A1Y1KD84   A0A0A1WIH3   Q7Q0C3  

PDB

4LDS     E-value=0.000126784,     Score=109

KEGG

101742259    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0016021   GO:0022857   GO:0005215   GO:0055085   GO:0006412   GO:0005840   GO:0003735   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

560

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

229.9787

Exp number, first 60 AAs:

20.37547

Total prob of N-in:

0.14192

POSSIBLE N-term signal

sequence

outside

1  -  38

TMhelix

39  -  61

inside

62  -  188

TMhelix

189  -  211

outside

212  -  214

TMhelix

215  -  237

inside

238  -  243

TMhelix

244  -  266

outside

267  -  270

TMhelix

271  -  290

inside

291  -  363

TMhelix

364  -  386

outside

387  -  395

TMhelix

396  -  418

inside

419  -  424

TMhelix

425  -  444

outside

445  -  448

TMhelix

449  -  471

inside

472  -  483

TMhelix

484  -  506

outside

507  -  515

TMhelix

516  -  538

inside

539  -  560

 

 

Pi

242.05009

Theta

190.46256

Tajima's D

1.036535

CLR

0.433068

CSRT

0.669666516674166

Interpretation

Possibly Positive selection