Gene

KWMTBOMO13510

Pre Gene Modal

BGIBMGA009196

Annotation

Organic_cation_transporter?_partial_[Operophtera_brumata]

Location

Bomo_Chr23(-):407780-410520      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.838

CDS

ATGTCTTCGGAAACTCTTGATCGAAAGGAAAATGACTGTCGAGACGCGAAGGTGGATTTGGATACGATTTTAGTAGAGGAAATAGGACAGTTCGGGAAATTTCAGCTTCGAACGCTGGCCCTGACGTTGGTCGCTGTCATATTTTGTGCTGTTTACGGGGAATTCGTGTTCACGGCTGCCAGAATCAACAGCAGGTGTCTTATCCCGGAGTGTGAGGAACCATCGACAGCGGTGTACGCTCCTGATTGGATTCTCAATGCAATTCCTGGAACCAGTCTCACGTCATTCGATAACTGCCAGCGCTTTGCAAATGCCTCGACCATCCTTACCGATAGATCCACCTGTCCAGCTGATTTATTTGACGTGCATCGTGTGGTCCAATGTGAAGCTTATGTCTATGAACATGCCCAAACTGTTGTTTATGACTTTGATTTAGGATGCGACGAATGGCGACGGACACTCATAGGAGGTGCAGTATTTTCCTGCACGTATATTTTAGTTTTGGAGTTAGTTGGTCCAAAATACCGTACTGTAGCTGGCGCAATACTAACCACATTTTTCGCCGTGGGTCAAGTGATATTGGCTCTTGTTGCCTGGGCTGTCCCGTACTGGAGACCCCTTACATTAGCCATGTATATACCTCAACTTATCACCATTGGATACCTTTGGGTTATTTCTGAATCAATACGCTGGTATATGAGCAAAAACAATTATGATGAAGCCGAAAAGTTGCTTCAAAATGTAGCTAAAGTCAACGGGAAACAGCTATCAAGACAGTCTTTGGAGGCTCTACGCAGGACCGCGGAAGAACAAAAGCGAAGAATAGATATTGAGAAGAAAGACAAAATAAAAGAACCATGGCTAATAGTTTTAGTGTTTCAAAACAGACGGATATTAATCAGATGCCTCGTCTCCCCGATCTGGTGGATCACTAGCACCTTAATATACCACGGATTGTCCATAAATGCAGTGAACATGTCGGGGAATGCTTATTTGAATTATGCTGCGGTAGCTGCAGCGGGAATTCCAGGTTTCTGGTTGGCAGTCCTTCTGATGAGCAGGATCGGAAGGAGACCGGTGTTGATCGGTGCATACTGGTTGTGTGGACTTTGTCAAGTCGCATACATATTTATGCCAGATGGTAAGTTTTTTTCAGTAATATAA

Protein

MSSETLDRKENDCRDAKVDLDTILVEEIGQFGKFQLRTLALTLVAVIFCAVYGEFVFTAARINSRCLIPECEEPSTAVYAPDWILNAIPGTSLTSFDNCQRFANASTILTDRSTCPADLFDVHRVVQCEAYVYEHAQTVVYDFDLGCDEWRRTLIGGAVFSCTYILVLELVGPKYRTVAGAILTTFFAVGQVILALVAWAVPYWRPLTLAMYIPQLITIGYLWVISESIRWYMSKNNYDEAEKLLQNVAKVNGKQLSRQSLEALRRTAEEQKRRIDIEKKDKIKEPWLIVLVFQNRRILIRCLVSPIWWITSTLIYHGLSINAVNMSGNAYLNYAAVAAAGIPGFWLAVLLMSRIGRRPVLIGAYWLCGLCQVAYIFMPDGKFFSVI

Uniprot

H9JI48   A0A0L7KTW1   A0A2A4K663   A0A194RE10   A0A2H1VCJ6   A0A194PT27   + More
A0A2W1BSR9   A0A0L7K4R7   A0A0L7KVH9   A0A2H1VQB3   A0A194RF43   A0A2H1VQC6   A0A212EJ24   A0A2W1BMH3   A0A194PSH3   A0A2A4K5Q2   A0A3S2L9U7   A0A0L7KTQ3   A0A2H1VAT9   A0A3S2LQC2   A0A2H1VSF4   A0A2A4K6L7   A0A2W1BMV0   A0A212F123   A0A0L7KWH4   A0A2W1BRL6   H9JI53   A0A194PJI6   A0A2A4J6J0   A0A194RGD2   A0A2A4K5Q3   A0A194RJF2   A0A212F137   A0A3S2NA23   A0A194PR44   A0A2H1V9B3   A0A2H1V9D8   A0A3S2TCP3   A0A212EMB5   H9IVE6   A0A194RF38   A0A194PRI3   A0A0L7K4Y5   A0A2A4K6M9   A0A182KSD5   H9JI54   A0A2C9GQY2   B0XDE9   A0A182RFF8   Q16WK7   A0A182QUL1   A0A182LZQ5   A0A0L7KV39   A0A0A1X788   B4IUN3   A0A182V3C2   A0A067RSY2   A0A1W4XNP7   A0A212FPC5   Q9VNW8   A0A2J7RPY5   A0A0Q9WR15   A0A034WVT1   Q2M044   B4QKP9   A0A0J9URD0   B4IAX7   A0A182WEZ8   A0A212F124   A0A336KAG2   A0A0M4EFX8   A0A3S2NDN7   B3MAI7   A0A182GYP2   N6UEW1   J3JTC2   A0A0L7KUG4   A0A084WCB2   A0A3B0J4H8   A0A182PKB6   B3NJ17   A0A0K8UFN6   A0A2H1VA76   A0A3S2M6B8   A0A182JXE2   A0A336LVU8   A0A1I8MQZ5   A0A182MYV4   A0A336LWX3   B0XDF0  

Pubmed

19121390    26227816    26354079    28756777    22118469    20966253    + More
17510324    25830018    17994087    17550304    24845553    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    15632085    22936249    26483478    23537049    22516182    24438588    25315136   

EMBL

BABH01041122    JTDY01005909    KOB66489.1    NWSH01000100    PCG79559.1    KQ460313    + More
KPJ16068.1    ODYU01001566    SOQ37954.1    KQ459595    KPI95919.1    KZ149964    PZC76257.1    JTDY01010709    KOB58080.1    JTDY01005309    KOB67130.1    ODYU01003788    SOQ42987.1    KPJ16069.1    SOQ42986.1    AGBW02014542    OWR41479.1    PZC76259.1    KPI95918.1    PCG79557.1    RSAL01000360    RVE42203.1    KOB66490.1    SOQ37955.1    RVE42202.1    ODYU01004183    SOQ43775.1    PCG79558.1    PZC76258.1    AGBW02010973    OWR47448.1    JTDY01005018    KOB67470.1    PZC76255.1    BABH01041117    BABH01041118    KQ459606    KPI91250.1    NWSH01002815    PCG67489.1    KQ460205    KPJ16878.1    PCG79561.1    KPJ16066.1    OWR47450.1    RVE42197.1    KPI95921.1    ODYU01001366    SOQ37440.1    SOQ37439.1    RVE42200.1    AGBW02013857    OWR42632.1    BABH01000979    BABH01000980    KPJ16064.1    KPI95922.1    JTDY01010584    KOB58165.1    PCG79564.1    BABH01041119    APCN01003305    DS232756    EDS45427.1    CH477563    EAT38951.1    AXCN02001021    AXCM01003135    JTDY01005496    KOB66936.1    GBXI01007300    JAD06992.1    CM000159    CH891970    EDW95499.1    EDX00097.1    KK852482    KDR22929.1    AGBW02003000    OWR55596.1    AE014296    BT150232    AAF51797.3    AGU12793.1    NEVH01001354    PNF42894.1    CH940647    KRF84583.1    GAKP01000632    JAC58320.1    CH379069    EAL31092.3    CM000363    EDX11464.1    CM002912    KMZ01136.1    CH480826    EDW44440.1    OWR47449.1    UFQS01000176    UFQT01000176    SSX00782.1    SSX21162.1    CP012525    ALC44946.1    RSAL01000186    RVE44804.1    CH902618    EDV41274.1    JXUM01021216    KQ560594    KXJ81736.1    APGK01029469    KB740735    ENN79151.1    BT126478    AEE61442.1    KOB66937.1    ATLV01022651    KE525335    KFB47856.1    OUUW01000002    SPP76405.1    CH954178    EDV52734.1    GDHF01026931    GDHF01013660    GDHF01009296    JAI25383.1    JAI38654.1    JAI43018.1    ODYU01001220    SOQ37134.1    RSAL01000027    RVE51971.1    SSX00781.1    SSX21161.1    SSX00783.1    SSX21163.1    EDS45428.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000283053    UP000075882    UP000075840    UP000002320    UP000075900    UP000008820    UP000075886    UP000075883    UP000002282    UP000075903    UP000027135    UP000192223    UP000000803    UP000235965    UP000008792    UP000001819    UP000000304    UP000001292    UP000075920    UP000092553    UP000007801    UP000069940    UP000249989    UP000019118    UP000030765    UP000268350    UP000075885    UP000008711    UP000075881    UP000095301    UP000075884   

PRIDE

H9JI48    H9JI53    H9IVE6    H9JI54    Q9VNW8   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr

Interpro

IPR036259   MFS_trans_sf        + More
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR036769   Ribosomal_L11_C_sf       
IPR020785   Ribosomal_L11_CS       

SUPFAM

SSF103473   SSF103473       

Gene 3D

1.10.10.250    

CDD

cd06174  MFS

ProteinModelPortal

H9JI48   A0A0L7KTW1   A0A2A4K663   A0A194RE10   A0A2H1VCJ6   A0A194PT27   + More
A0A2W1BSR9   A0A0L7K4R7   A0A0L7KVH9   A0A2H1VQB3   A0A194RF43   A0A2H1VQC6   A0A212EJ24   A0A2W1BMH3   A0A194PSH3   A0A2A4K5Q2   A0A3S2L9U7   A0A0L7KTQ3   A0A2H1VAT9   A0A3S2LQC2   A0A2H1VSF4   A0A2A4K6L7   A0A2W1BMV0   A0A212F123   A0A0L7KWH4   A0A2W1BRL6   H9JI53   A0A194PJI6   A0A2A4J6J0   A0A194RGD2   A0A2A4K5Q3   A0A194RJF2   A0A212F137   A0A3S2NA23   A0A194PR44   A0A2H1V9B3   A0A2H1V9D8   A0A3S2TCP3   A0A212EMB5   H9IVE6   A0A194RF38   A0A194PRI3   A0A0L7K4Y5   A0A2A4K6M9   A0A182KSD5   H9JI54   A0A2C9GQY2   B0XDE9   A0A182RFF8   Q16WK7   A0A182QUL1   A0A182LZQ5   A0A0L7KV39   A0A0A1X788   B4IUN3   A0A182V3C2   A0A067RSY2   A0A1W4XNP7   A0A212FPC5   Q9VNW8   A0A2J7RPY5   A0A0Q9WR15   A0A034WVT1   Q2M044   B4QKP9   A0A0J9URD0   B4IAX7   A0A182WEZ8   A0A212F124   A0A336KAG2   A0A0M4EFX8   A0A3S2NDN7   B3MAI7   A0A182GYP2   N6UEW1   J3JTC2   A0A0L7KUG4   A0A084WCB2   A0A3B0J4H8   A0A182PKB6   B3NJ17   A0A0K8UFN6   A0A2H1VA76   A0A3S2M6B8   A0A182JXE2   A0A336LVU8   A0A1I8MQZ5   A0A182MYV4   A0A336LWX3   B0XDF0  

PDB

4JA4     E-value=0.00933338,     Score=92

KEGG

101742978    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0005215   GO:0016021   GO:0055085   GO:0022857   GO:0006412   GO:0005840   GO:0003735   GO:0015870   GO:0015220   GO:0032223   GO:0090328   GO:0007613   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

387

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

145.94056

Exp number, first 60 AAs:

21.11574

Total prob of N-in:

0.83283

POSSIBLE N-term signal

sequence

inside

1  -  37

TMhelix

38  -  60

outside

61  -  149

TMhelix

150  -  172

inside

173  -  178

TMhelix

179  -  201

outside

202  -  205

TMhelix

206  -  225

inside

226  -  297

TMhelix

298  -  320

outside

321  -  329

TMhelix

330  -  352

inside

353  -  358

TMhelix

359  -  378

outside

379  -  387

 

 

Pi

207.822114

Theta

194.224759

Tajima's D

0.220337

CLR

0.158836

CSRT

0.426378681065947

Interpretation

Uncertain