Gene

KWMTBOMO13509

Pre Gene Modal

BGIBMGA009197

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Papilio_machaon]

Location

Bomo_Chr23(-):389873-404460      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.89

CDS

ATGGTGGAGTCTCAATTGTCGGACTCTTTCAATCTAGACGGCATCCTTAGTGAGCTCGGCAGCTTCGGGAAGTACCAGTTGCTATTCTTACTACTGCTATCATTCAGAGATTCCTTCCTGGCGATGTGTAATTTCAATTATGTATTCACCGCTGATGAAGTGAAGTTCAGATGCGCAATACCAGAATGCGATACACCAACTCCAAGTTTCAACGCTACGTGGACAGCATTCGCTTTGCCGAACACAACCGATACCTGCTACAGAATGGCGCCTCTGCTAGAAGATCGGTTCAATAGAACAGGACAGAACGTGCAGTCGTTACCTAACAAAGCGGACCCGCCGTACACCTGCAGCCCTGAGTACTTCGACGCGAACAGAACATTGGGCTGCGATAAACTAGTGTACGAGGATTACAATAGCATTGTTGCTGAGTTTGACCTCGGCTGCGAACCTTGGAAGAGGACGATGATCGGAACAGTCCATAACCTGGGATTAGTCTTCTCGTTTATAATATCCGGGATCATATCCGACAGATATGGCAGGAAGGTGATAATCGTTGGCACCCCACTGGTGGTCGGTGTGGTCGGGCTGGTCAAATCGTTCTCAGTTAAATACTGGATGCTGCTCGTCCTCGAGTTCTTTGAGACGGCTTTTGGCTACGGAAATGCTTCGATGGTTTTGTGCAGGCTGAGAGGCAGTTTATCTAGAGGGATAGAGAACATTGCCGGTCACGCCGCGGGTGCTTAA

Protein

MVESQLSDSFNLDGILSELGSFGKYQLLFLLLLSFRDSFLAMCNFNYVFTADEVKFRCAIPECDTPTPSFNATWTAFALPNTTDTCYRMAPLLEDRFNRTGQNVQSLPNKADPPYTCSPEYFDANRTLGCDKLVYEDYNSIVAEFDLGCEPWKRTMIGTVHNLGLVFSFIISGIISDRYGRKVIIVGTPLVVGVVGLVKSFSVKYWMLLVLEFFETAFGYGNASMVLCRLRGSLSRGIENIAGHAAGA

Uniprot

H9JI49   A0A2W1BUD3   A0A2A4K7D4   A0A212F141   A0A194RER3   A0A0L7KYX8   + More
A0A194PXP4   A0A2H1V9B3   A0A0L7L0F4   S4PTC9   A0A2H1VSB0   A0A3S2NA23   A0A2H1V9G0   A0A2A4K5Q8   A0A2H1VFS1   A0A194QDP3   A0A0N1PI45   A0A3S2L9U7   A0A194RJG1   A0A194PR33   H9IVN2   A0A2A4K5P1   A0A212FPC5   A0A2A4JC88   A0A1B0D118   A0A212EJ20   H9JSS6   A0A3S2NDN7   A0A067RSY2   A0A1B0DMI4   A0A194PT22   A0A2A4K7E3   A0A194QI00   A0A2W1BPN7   A0A1B6MS44   A0A2A4K5Q2   A0A194PSH3   A0A2W1BMH3   A0A2J7RPZ7   A0A194RF43   A0A2H1VQB3   A0A2A4J6J0   A0A2A4K5R4   A0A2A4J3F4   A0A2W1BRJ1   A0A3S2M6B8   A0A0L7KWH4   A0A182SYI8   A0A194PSH8   A0A2H1VQS6   A0A2H1VA76   A0A194QC91   H9JI37   A0A2W1BM98   A0A212F137   A0A2H1VCJ6   A0A194RE04   A0A212F848   A0A194RIS2   H9IVE6   A0A1L8DF07   A0A1B6F9N5   A0A2A4K673   A0A3S2NIQ2   A0A2S2PLV9   A0A182J645   A0A1L8DEA8   A0A212F2Q3   A0A212EIZ7   A0A1L8DEM1   A0A2M3ZIE3   A0A1B0CIE6   A0A1B0CNS3   A0A2R7VUT0   A0A212EJ13   A0A182RFF8   A0A182Q0W8   B0XDF1   A0A2H1VQC6   A0A0L0CC92   A0A182RSF1   A0A0N1PID1   A0A1L8DEQ3   A0A3S2NYU5   A0A182MYV4   A0A182FXJ5   A0A1L8DEI6   H9JI46   A0A182VW24   A0A194Q2K7   A0A182QK53   J3JWW6   A0A182VW25   A0A194PT27   A0A212EJ24   A0A1B6D578   A0A212F123  

Pubmed

19121390    28756777    22118469    26354079    26227816    23622113    + More
24845553    26108605    22516182    23537049   

EMBL

BABH01041119    BABH01041120    KZ149964    PZC76256.1    NWSH01000100    PCG79560.1    + More
AGBW02010973    OWR47447.1    KQ460313    KPJ16067.1    JTDY01004270    KOB68355.1    KQ459595    KPI95920.1    ODYU01001366    SOQ37440.1    JTDY01003949    KOB68791.1    GAIX01012258    JAA80302.1    ODYU01004125    SOQ43666.1    RSAL01000360    RVE42197.1    SOQ37441.1    PCG79567.1    ODYU01002328    SOQ39679.1    KQ459193    KPJ03085.1    KQ459762    KPJ20130.1    RVE42203.1    KPJ16076.1    KPI95911.1    BABH01039623    PCG79565.1    AGBW02003000    OWR55596.1    NWSH01002161    PCG69013.1    AJVK01021828    AGBW02014542    OWR41475.1    BABH01035953    BABH01035954    RSAL01000186    RVE44804.1    KK852482    KDR22929.1    AJVK01006968    KPI95914.1    PCG79570.1    KPJ03081.1    PZC76251.1    GEBQ01001264    JAT38713.1    PCG79557.1    KPI95918.1    PZC76259.1    NEVH01001354    PNF42898.1    KPJ16069.1    ODYU01003788    SOQ42987.1    NWSH01002815    PCG67489.1    PCG79571.1    NWSH01003619    PCG66044.1    PZC76264.1    RSAL01000027    RVE51971.1    JTDY01005018    KOB67470.1    KPI95923.1    ODYU01003881    SOQ43193.1    ODYU01001220    SOQ37134.1    KPJ03082.1    BABH01041187    BABH01041188    KZ149965    PZC76202.1    OWR47450.1    ODYU01001566    SOQ37954.1    KPJ16063.1    AGBW02009797    OWR49901.1    KQ460325    KPJ15841.1    BABH01000979    BABH01000980    GFDF01009170    JAV04914.1    GECZ01022955    JAS46814.1    PCG79569.1    RSAL01000974    RVE41008.1    GGMR01017774    MBY30393.1    GFDF01009285    JAV04799.1    AGBW02010692    OWR48028.1    AGBW02014543    OWR41473.1    GFDF01009284    JAV04800.1    GGFM01007521    MBW28272.1    AJWK01013204    AJWK01020734    KK854099    PTY11253.1    OWR41474.1    AXCN02001021    DS232756    EDS45429.1    SOQ42986.1    JRES01000704    KNC29064.1    LADJ01036891    KPJ21299.1    GFDF01009227    JAV04857.1    RSAL01000091    RVE48029.1    GFDF01009228    JAV04856.1    BABH01041126    KQ459562    KPI99797.1    AXCN02001495    APGK01035527    APGK01035528    BT127734    KB740927    KB631762    AEE62696.1    ENN78004.1    ERL85926.1    KPI95919.1    OWR41479.1    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    OWR47448.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000037510    UP000053268    + More
UP000283053    UP000092462    UP000027135    UP000235965    UP000075901    UP000075880    UP000092461    UP000075900    UP000075886    UP000002320    UP000037069    UP000075884    UP000069272    UP000075920    UP000019118    UP000030742   

PRIDE

H9JI49    H9IVN2    H9JSS6    H9JI37    H9IVE6    H9JI46    + More

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr

Interpro

IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR005828   MFS_sugar_transport-like       
IPR036769   Ribosomal_L11_C_sf       
IPR020785   Ribosomal_L11_CS       

SUPFAM

SSF103473   SSF103473       

Gene 3D

1.10.10.250    

CDD

cd06174  MFS

ProteinModelPortal

H9JI49   A0A2W1BUD3   A0A2A4K7D4   A0A212F141   A0A194RER3   A0A0L7KYX8   + More
A0A194PXP4   A0A2H1V9B3   A0A0L7L0F4   S4PTC9   A0A2H1VSB0   A0A3S2NA23   A0A2H1V9G0   A0A2A4K5Q8   A0A2H1VFS1   A0A194QDP3   A0A0N1PI45   A0A3S2L9U7   A0A194RJG1   A0A194PR33   H9IVN2   A0A2A4K5P1   A0A212FPC5   A0A2A4JC88   A0A1B0D118   A0A212EJ20   H9JSS6   A0A3S2NDN7   A0A067RSY2   A0A1B0DMI4   A0A194PT22   A0A2A4K7E3   A0A194QI00   A0A2W1BPN7   A0A1B6MS44   A0A2A4K5Q2   A0A194PSH3   A0A2W1BMH3   A0A2J7RPZ7   A0A194RF43   A0A2H1VQB3   A0A2A4J6J0   A0A2A4K5R4   A0A2A4J3F4   A0A2W1BRJ1   A0A3S2M6B8   A0A0L7KWH4   A0A182SYI8   A0A194PSH8   A0A2H1VQS6   A0A2H1VA76   A0A194QC91   H9JI37   A0A2W1BM98   A0A212F137   A0A2H1VCJ6   A0A194RE04   A0A212F848   A0A194RIS2   H9IVE6   A0A1L8DF07   A0A1B6F9N5   A0A2A4K673   A0A3S2NIQ2   A0A2S2PLV9   A0A182J645   A0A1L8DEA8   A0A212F2Q3   A0A212EIZ7   A0A1L8DEM1   A0A2M3ZIE3   A0A1B0CIE6   A0A1B0CNS3   A0A2R7VUT0   A0A212EJ13   A0A182RFF8   A0A182Q0W8   B0XDF1   A0A2H1VQC6   A0A0L0CC92   A0A182RSF1   A0A0N1PID1   A0A1L8DEQ3   A0A3S2NYU5   A0A182MYV4   A0A182FXJ5   A0A1L8DEI6   H9JI46   A0A182VW24   A0A194Q2K7   A0A182QK53   J3JWW6   A0A182VW25   A0A194PT27   A0A212EJ24   A0A1B6D578   A0A212F123  

KEGG

101742835    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0055085   GO:0016021   GO:0005215   GO:0022857   GO:0006412   GO:0005840   GO:0003735   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

248

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

57.80219

Exp number, first 60 AAs:

11.44594

Total prob of N-in:

0.04457

POSSIBLE N-term signal

sequence

outside

1  -  156

TMhelix

157  -  176

inside

177  -  182

TMhelix

183  -  205

outside

206  -  248

 

 

Pi

257.191134

Theta

151.1577

Tajima's D

-2.017714

CLR

199.197943

CSRT

0.016049197540123

Interpretation

Possibly Positive selection