Gene

KWMTBOMO13506

Pre Gene Modal

BGIBMGA009201

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Bombyx_mori]

Location

Bomo_Chr23(+):361651-372034      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.737

CDS

ATGGCAGACAGAAAACCCAGCGTGGACCCCGCGAGGAAGGGCAGCGCATTTGACCAGCCAATAGATCTAGACCATGTGCTCATCAACGAGCTGGGACAGTTTGGATTGTTTCAGTTGAGGAACATCCTCTTGGTGGCCATACCTATTATCATGTCGGCTTTCATGAGCGAATTCGTCTTTTCTGCTGCAGCTATTCCTCACAGGTGTCGGATCCCAGAGTGCGGGGAAGTTGAGAAAAGTACGAATTACGACCGAGAGTGGTTGGCGAACGCCATCCCTGAGAGCGACTCTGGATTCGCGAGTTGTGAGCGGTTCGCTCCAGTCACCGGGATCAACGGGACATTGGACTACTGTCCGCCGAATATCTTCCAGACCAACACCATTGAGTGCGATGGATTCATTTATACCAGAGATAACTCTGTTGTTTTTGACTTCGACCTTGGGTGCCAGGAGTGGCTTCGTGCTCTTGCCGGCACTTTATCCAGCGTGGGGACATTGCTGGTCCTGCCCATCACTGGTTATGTTTCCGACCGCTTCGGGAGACGTATGGCCCTAGTGATCAGCGTCTTCAACTTGGCACTATTTGGCTTAATCAAAGCCTTCTCCGTAAACTACGTTATGTACTTGGCTTTCCAGGTAATACAGACGACTCTGGGGGCCGGCACCTTCAGCTCCGCCTACATATTCGCCACTGAATTCGTGGGACCGAAGTACCGAGTCATTACCAGTGCGACCTGCTCATCGATGTTCGCGGTCGGTCAAGTGGTCCTCGGGGGGATCGCGTGGCTGGTCCAGCCCTGGCGGTACATGATCATGACGCTCCACATCCCTTGTTTCCTTATCGTCTCATACTACTGGCTACTATCGGAGAGCGTAAGATGGCTGCTCTCAAAGAGAAAATTCGATGAAGCCCGACGGGTCTTGGAGAAAGCTGCCCATGTTAACAAGAGAGAGATTAGTCAGAAGTCTATGAACGCATTGATGAGGCCTCCAGCGGCGGTCGCCACGGCGGAACCCGTAGAAGCAGACCCTGGAGTTCTCAGAACCATAATCAAATCTCCTATCCTACTCCGTCGTGTGTGCACCACGCCGATCTGGTGGATCACCACGACCTTCGTGTACTACGGCCTCTCCATCAACTCCGCCAGCTTATCAGACACCATTTACTTGAACTACATCCTGACCTGTGCTATCGAAATCCCTGGATTTTACACTGCGGTCTTGATTCTGGACAGGGTCGGAAGAAAGCCGACTTTATCTGGTGGATTCTTCTTCAGTGCTCTTTGCAATATAGCCTTTGCTTTCATACCTAACGACATGACAGTTCTTCGCTTGATAATATTCCTTCTGGGCAAGTTCGGTATCTCCATGGTGTTCACATCCCTGTACCTGTTCACGTCCGAGCTGTACCCCACGCAGTACAGACACAGCCTGCTCGCATTCTCGTCCATGATCGGTCGCATCGGATCCATCACTGCTCCACTCACTCCTGCTTTAATGGAGTATTGGCATGGCATACCTACAGTGATGTTCGGCGCTATGGGCTTCCTCTCCGGAGTGCTGATCCTCACTCAGCCCGAAACCCTGGGCACCAAGATGCCGAACACACTCGCAGAGGCAGAGGCGCTTGGCACTCCTCAATCCAAGATACAAAGCAACTAA

Protein

MADRKPSVDPARKGSAFDQPIDLDHVLINELGQFGLFQLRNILLVAIPIIMSAFMSEFVFSAAAIPHRCRIPECGEVEKSTNYDREWLANAIPESDSGFASCERFAPVTGINGTLDYCPPNIFQTNTIECDGFIYTRDNSVVFDFDLGCQEWLRALAGTLSSVGTLLVLPITGYVSDRFGRRMALVISVFNLALFGLIKAFSVNYVMYLAFQVIQTTLGAGTFSSAYIFATEFVGPKYRVITSATCSSMFAVGQVVLGGIAWLVQPWRYMIMTLHIPCFLIVSYYWLLSESVRWLLSKRKFDEARRVLEKAAHVNKREISQKSMNALMRPPAAVATAEPVEADPGVLRTIIKSPILLRRVCTTPIWWITTTFVYYGLSINSASLSDTIYLNYILTCAIEIPGFYTAVLILDRVGRKPTLSGGFFFSALCNIAFAFIPNDMTVLRLIIFLLGKFGISMVFTSLYLFTSELYPTQYRHSLLAFSSMIGRIGSITAPLTPALMEYWHGIPTVMFGAMGFLSGVLILTQPETLGTKMPNTLAEAEALGTPQSKIQSN

Uniprot

H9JI53   H9JI54   A0A0L7KV39   A0A194PRI3   A0A2H1V9D8   A0A3S2NQS4   + More
A0A2A4K5Q3   A0A2W1BRL6   A0A3S2TCP3   A0A212F123   A0A194PR44   A0A212F124   A0A194RF38   A0A0L7KZ57   A0A194RJF2   H9JI52   A0A2A4J6J0   A0A0L7KWH4   A0A194RGD2   A0A212F137   A0A194PJI6   A0A194RF43   A0A2A4K5Q2   A0A3S2L9U7   A0A212EJ24   A0A212EMB5   A0A2W1BMH3   A0A0L7KTQ3   A0A194RE10   A0A194PT27   A0A2H1VQB3   A0A194PSH3   A0A2A4K663   A0A2H1VCJ6   A0A2H1VQC6   A0A2W1BSR9   A0A2A4JIA3   A0A2H1VAT9   A0A2W1BHB5   A0A2A4JH68   A0A2W1BLR2   A0A3S2LQC2   A0A2H1VSF4   A0A0L7K3V5   A0A2A4K6L7   A0A0L7KTW1   A0A2W1BMV0   A0A2H1V9B3   H9JI48   A0A3S2NA23   A0A0L7KVH9   A0A0L7K4R7   A0A194QDP3   A0A212FPC5   A0A3S2NDN7   A0A182SYI8   B0XDF1   A0A2J7RPZ7   Q7Q0C3   Q16WK7   A0A2A4K6M9   B0XDF0   A0A2J7RPY7   A0A182LZQ5   A0A2J7RPY0   A0A067RSY2   A0A3S2M6B8   A0A212EJ20   A0A2H1VA76   A0A182Y1J3   A0A3S2NIQ2   A0A182QUL1   A0A182GYP2   A0A3S2L3J0   A0A1L8DEQ3   A0A1L8DEI6   A0A194QI00   A0A2A4J5Q3   A0A2H1VFS1   A0A182KSD5   A0A194PT22   A0A194QC91   A0A2W1BRJ1   A0A2A4JC88   A0A0N1PI45   A0A0L7LKI8   A0A194RIS2   A0A212F2Q3   A0A182MYV4   A0A2A4K5R4   A0A2A4K5P1   A0A182RFF8   A0A195E462   B0XDE9   A0A0K8VUC5   A0A1Y1KD84   A0A0K8UFN6  

Pubmed

19121390    26227816    26354079    28756777    22118469    12364791    + More
14747013    17210077    17510324    24845553    25244985    26483478    20966253    28004739   

EMBL

BABH01041117    BABH01041118    BABH01041119    JTDY01005496    KOB66936.1    KQ459595    + More
KPI95922.1    ODYU01001366    SOQ37439.1    RSAL01000360    RVE42198.1    NWSH01000100    PCG79561.1    KZ149964    PZC76255.1    RVE42200.1    AGBW02010973    OWR47448.1    KPI95921.1    OWR47449.1    KQ460313    KPJ16064.1    JTDY01004270    KOB68356.1    KPJ16066.1    BABH01041114    NWSH01002815    PCG67489.1    JTDY01005018    KOB67470.1    KQ460205    KPJ16878.1    OWR47450.1    KQ459606    KPI91250.1    KPJ16069.1    PCG79557.1    RVE42203.1    AGBW02014542    OWR41479.1    AGBW02013857    OWR42632.1    PZC76259.1    JTDY01005909    KOB66490.1    KPJ16068.1    KPI95919.1    ODYU01003788    SOQ42987.1    KPI95918.1    PCG79559.1    ODYU01001566    SOQ37954.1    SOQ42986.1    PZC76257.1    NWSH01001466    PCG71160.1    SOQ37955.1    KZ150061    PZC74228.1    PCG71159.1    PZC74227.1    RVE42202.1    ODYU01004183    SOQ43775.1    JTDY01011376    KOB56709.1    PCG79558.1    KOB66489.1    PZC76258.1    SOQ37440.1    BABH01041122    RVE42197.1    JTDY01005309    KOB67130.1    JTDY01010709    KOB58080.1    KQ459193    KPJ03085.1    AGBW02003000    OWR55596.1    RSAL01000186    RVE44804.1    DS232756    EDS45429.1    NEVH01001354    PNF42898.1    AAAB01008986    EAA00192.3    CH477563    EAT38951.1    PCG79564.1    EDS45428.1    PNF42889.1    AXCM01003135    PNF42891.1    KK852482    KDR22929.1    RSAL01000027    RVE51971.1    OWR41475.1    ODYU01001220    SOQ37134.1    RSAL01000974    RVE41008.1    AXCN02001021    JXUM01021216    KQ560594    KXJ81736.1    RVE44802.1    GFDF01009227    JAV04857.1    GFDF01009228    JAV04856.1    KPJ03081.1    NWSH01003151    PCG66854.1    ODYU01002328    SOQ39679.1    KPI95914.1    KPJ03082.1    PZC76264.1    NWSH01002161    PCG69013.1    KQ459762    KPJ20130.1    JTDY01000842    KOB75696.1    KQ460325    KPJ15841.1    AGBW02010692    OWR48028.1    PCG79571.1    PCG79565.1    KQ979657    KYN19975.1    EDS45427.1    GDHF01009833    JAI42481.1    GEZM01087818    JAV58458.1    GDHF01026931    GDHF01013660    GDHF01009296    JAI25383.1    JAI38654.1    JAI43018.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000053240    UP000075901    UP000002320    UP000235965    UP000007062    UP000008820    UP000075883    UP000027135    UP000076408    UP000075886    UP000069940    UP000249989    UP000075882    UP000075884    UP000075900    UP000078492   

PRIDE

H9JI53    H9JI54    H9JI52    H9JI48   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr

Interpro

IPR020846   MFS_dom        + More
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR036769   Ribosomal_L11_C_sf       
IPR020785   Ribosomal_L11_CS       

SUPFAM

SSF103473   SSF103473       

Gene 3D

1.10.10.250    

CDD

cd06174  MFS

ProteinModelPortal

H9JI53   H9JI54   A0A0L7KV39   A0A194PRI3   A0A2H1V9D8   A0A3S2NQS4   + More
A0A2A4K5Q3   A0A2W1BRL6   A0A3S2TCP3   A0A212F123   A0A194PR44   A0A212F124   A0A194RF38   A0A0L7KZ57   A0A194RJF2   H9JI52   A0A2A4J6J0   A0A0L7KWH4   A0A194RGD2   A0A212F137   A0A194PJI6   A0A194RF43   A0A2A4K5Q2   A0A3S2L9U7   A0A212EJ24   A0A212EMB5   A0A2W1BMH3   A0A0L7KTQ3   A0A194RE10   A0A194PT27   A0A2H1VQB3   A0A194PSH3   A0A2A4K663   A0A2H1VCJ6   A0A2H1VQC6   A0A2W1BSR9   A0A2A4JIA3   A0A2H1VAT9   A0A2W1BHB5   A0A2A4JH68   A0A2W1BLR2   A0A3S2LQC2   A0A2H1VSF4   A0A0L7K3V5   A0A2A4K6L7   A0A0L7KTW1   A0A2W1BMV0   A0A2H1V9B3   H9JI48   A0A3S2NA23   A0A0L7KVH9   A0A0L7K4R7   A0A194QDP3   A0A212FPC5   A0A3S2NDN7   A0A182SYI8   B0XDF1   A0A2J7RPZ7   Q7Q0C3   Q16WK7   A0A2A4K6M9   B0XDF0   A0A2J7RPY7   A0A182LZQ5   A0A2J7RPY0   A0A067RSY2   A0A3S2M6B8   A0A212EJ20   A0A2H1VA76   A0A182Y1J3   A0A3S2NIQ2   A0A182QUL1   A0A182GYP2   A0A3S2L3J0   A0A1L8DEQ3   A0A1L8DEI6   A0A194QI00   A0A2A4J5Q3   A0A2H1VFS1   A0A182KSD5   A0A194PT22   A0A194QC91   A0A2W1BRJ1   A0A2A4JC88   A0A0N1PI45   A0A0L7LKI8   A0A194RIS2   A0A212F2Q3   A0A182MYV4   A0A2A4K5R4   A0A2A4K5P1   A0A182RFF8   A0A195E462   B0XDE9   A0A0K8VUC5   A0A1Y1KD84   A0A0K8UFN6  

PDB

4LDS     E-value=8.70234e-11,     Score=162

KEGG

101742021    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0055085   GO:0016021   GO:0005215   GO:0022857   GO:0006412   GO:0005840   GO:0003735   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

553

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

247.47897

Exp number, first 60 AAs:

18.75908

Total prob of N-in:

0.50424

POSSIBLE N-term signal

sequence

inside

1  -  42

TMhelix

43  -  65

outside

66  -  152

TMhelix

153  -  175

inside

176  -  186

TMhelix

187  -  209

outside

210  -  212

TMhelix

213  -  235

inside

236  -  239

TMhelix

240  -  262

outside

263  -  266

TMhelix

267  -  289

inside

290  -  355

TMhelix

356  -  378

outside

379  -  387

TMhelix

388  -  410

inside

411  -  416

TMhelix

417  -  436

outside

437  -  445

TMhelix

446  -  465

inside

466  -  477

TMhelix

478  -  500

outside

501  -  503

TMhelix

504  -  523

inside

524  -  553

 

 

Pi

198.271712

Theta

179.777054

Tajima's D

0.777413

CLR

11.876316

CSRT

0.592320383980801

Interpretation

Uncertain