Gene

KWMTBOMO13499

Pre Gene Modal

BGIBMGA009193

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Papilio_polytes]

Location

Bomo_Chr23(+):261351-273895      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.931

CDS

ATGGCAAGTGAAGTGAAAGAGGAATGGTGCTCGGGCTGGGGCCGATGGCAAGTGAGGCTGGCCCTCCTGCTGGCGCTGCCCGTGTTCCTCACCGGCGCCTACGGAACGAACTACGTGTTCCTGGCGGGCCCTACTGAGTACAGGTGTCGTGTCCCAGAATGTGAAGGATCTTCGAGCAAGGTCTCGGTGACGGCAGAGACCTGGTCTCAACCTTGGACAAAATGGGCTCTGGTTCCCAATGATCCTTGTAGAAGATGGAGCCCGAAGCACTTGGATGGGGCTTGTACCGCTGACGCTTTCGACAACAGCACTTCAGAAGTCTGCGAGAACTTCGTGTATCGGGCGTCGAGTAGTATTGTTGTAGAGTTCGACCTGGCCTGCAAGGAGTGGATGCGGTCGTTAGTCGGCACCATTCACTGTGTGGGAATGCTCATCTCTCTGCCCATCATAGGCTTCATATCGGATAGATGGGGCCGTCGGAGCGCCCTGATTGTGAGCAGCTGCGGCGCAGGAGTGTTCGGCCTCTGCAAGTCTTTCGTCGGGTCCTACTACATGTATGTGACAGCCGAGATGCTGGAGACTGCCTTCGGAGCGAGTGTCTACCCGTCGGCCTTTGTCTTGATGATCGAATGGCTCGGAGTCGAGCACAGGGTCCTGGCCAGCTTCGTGCTCGGCATCCCGCTGTCCCTTGGAGCTGCTTTTTTATCACTCTTGGACTACTTGACTGGTCACTGGAGACTCTGGGCCAGAATAGCATATCCACCGTCATTTTTATTTCTCTTATACCCTTGGGTGCTACCTGAGAGTGTTCGATGGCTGATCACTAGAGGGAGAGTCTCCGAAGCTGTGGCCACCATCAGAAGTGCTCTGAACTGTAACCGGATGACGATTCCGAAAGCAGGCTTAGAAAAGACTGTGATGAATGAGCAGGAAGCCATAGGGAGCAGTGGGGTCCTGCAGGACGAAAGTCTGCTGCGTGCTTTGATCAAGTATGAAGTCCTGCGTCGTCGGCTGTTCGTGTGCTGCGTGTGGTGGTTGTCGTGCGTGTTCGTGTTCTACGGGCTGGCGGTGCGCGCGCACGTGCTGGCGGGGTCTGCGCACGTGAACTACGCGCTGGTGGCGGGCGCGGAGCTCCCCGCGCTGGCGCTCAACACCCTGCTGCTGGACCGCGTGGGGCGCCGCCCGCTGCTCACGGCCGCCCTGCTGCTCACCGCCGTGTCGCTCATCACTTTACCGTGCTTGCCTCAATCGAGCACAGGTTGGGGCACGGCTCTGTACCTGTCGGGCAAGGTGGGCGTGACGATGTCGCTGAACGCGCTGTACGTGTACACGGCGGAGCTGTTCCCCACGCGCGCGCGGCACCGCCTGCTGGCCGCCTGCTCCGCCGTGGGCCGCGTCGGCGCCATATTCGCGCCGCTCACGTCTTTGCTGGCGGAGTACAGGACGTGGCTGCCGACCGTATTGTTCGGTTCCCTGCCTCTGCTGAGCGCGGCGCTCACCTTCCTGGTCCCCGACACGCTGCACCAGACGCTGCCCGATTCCTTCGCAGACCTGGAAGAGTCTCCGCCACCGGTACACATTAATGAAGCTTAA

Protein

MASEVKEEWCSGWGRWQVRLALLLALPVFLTGAYGTNYVFLAGPTEYRCRVPECEGSSSKVSVTAETWSQPWTKWALVPNDPCRRWSPKHLDGACTADAFDNSTSEVCENFVYRASSSIVVEFDLACKEWMRSLVGTIHCVGMLISLPIIGFISDRWGRRSALIVSSCGAGVFGLCKSFVGSYYMYVTAEMLETAFGASVYPSAFVLMIEWLGVEHRVLASFVLGIPLSLGAAFLSLLDYLTGHWRLWARIAYPPSFLFLLYPWVLPESVRWLITRGRVSEAVATIRSALNCNRMTIPKAGLEKTVMNEQEAIGSSGVLQDESLLRALIKYEVLRRRLFVCCVWWLSCVFVFYGLAVRAHVLAGSAHVNYALVAGAELPALALNTLLLDRVGRRPLLTAALLLTAVSLITLPCLPQSSTGWGTALYLSGKVGVTMSLNALYVYTAELFPTRARHRLLAACSAVGRVGAIFAPLTSLLAEYRTWLPTVLFGSLPLLSAALTFLVPDTLHQTLPDSFADLEESPPPVHINEA

Uniprot

H9JI45   A0A2A4K673   A0A194RFK1   A0A2W1BC35   A0A3S2TPZ8   A0A212EJ13   + More
A0A194PSG8   A0A212EJ20   A0A2H1VC91   A0A2H1VA76   A0A2A4K5R4   A0A2W1BRJ1   A0A3S2M6B8   A0A2A4K7E3   A0A3S2NIQ2   A0A3S2NA23   H9IVN2   A0A194PT22   A0A2H1V9B3   A0A0N1PI45   A0A194QI00   A0A212FPC5   A0A2A4K5Q2   A0A2W1BMH3   A0A1L8DEQ3   A0A0L7LKI8   A0A1L8DEI6   A0A3S2NDN7   A0A194RF43   A0A0L7KUG4   A0A212F2Q3   A0A194QDP3   A0A3S2L3J0   A0A3S2TCP3   A0A3S2L9U7   A0A2H1V9D8   A0A2H1V1L3   A0A2A4J5Q3   A0A194QC91   A0A1B0DMI4   A0A2A4K6M9   A0A182KSD5   A0A2A4K5Q3   A0A212ERF4   A0A2H1VFS1   A0A0L7KTQ3   A0A212EH35   H9JI53   A0A194RIS2   A0A194REW9   H9JI54   A0A1B0D118   A0A212EJ24   A0A2W1BRL6   A0A2A4JC88   A0A2W1BHB5   A0A212F848   A0A1B0CF89   A0A212F158   A0A212F123   A0A2A4K5P1   A0A2H1VQC6   A0A3L8D7U5   A0A067RSY2   A0A2A4J455   A0A1B0DJC6   A0A182JXE2   A0A026W5E8   A0A0L7KV39   A0A2A4JIA3   A0A154PCE9   A0A194RGD2   A0A2H1VAT9   A0A182WZR9   A0A2H1VQB3   A0A2H1V9G0   A0A194PR44   A0A2A4K7E5   A0A3S2NQS4   A0A2A4K663   A0A1L8DED6   A0A182SYI8   A0A1L8DED2   B0XDF1   H9IWG7   B3MAJ1   A0A195DF58   A0A2A4J6J0   A0A2H1VDM1   A0A3B0JLU9   A0A0V0GBF3   A0A194PSH3   A0A194PT27   A0A2H1W2A4   A0A1B6D578   A0A0L7RIG1   A0A2J7RPY7   A0A2J7RPY0   A0A194PRI3   B4IUN3  

Pubmed

19121390    26354079    28756777    22118469    26227816    20966253    + More
30249741    24845553    24508170    17994087    17550304   

EMBL

BABH01041192    NWSH01000100    PCG79569.1    KQ460313    KPJ16075.1    KZ150327    + More
PZC71374.1    RSAL01000027    RVE51969.1    AGBW02014543    OWR41474.1    KQ459595    KPI95913.1    AGBW02014542    OWR41475.1    ODYU01001786    SOQ38463.1    ODYU01001220    SOQ37134.1    PCG79571.1    KZ149964    PZC76264.1    RVE51971.1    PCG79570.1    RSAL01000974    RVE41008.1    RSAL01000360    RVE42197.1    BABH01039623    KPI95914.1    ODYU01001366    SOQ37440.1    KQ459762    KPJ20130.1    KQ459193    KPJ03081.1    AGBW02003000    OWR55596.1    PCG79557.1    PZC76259.1    GFDF01009227    JAV04857.1    JTDY01000842    KOB75696.1    GFDF01009228    JAV04856.1    RSAL01000186    RVE44804.1    KPJ16069.1    JTDY01005496    KOB66937.1    AGBW02010692    OWR48028.1    KPJ03085.1    RVE44802.1    RVE42200.1    RVE42203.1    SOQ37439.1    ODYU01000079    SOQ34232.1    NWSH01003151    PCG66854.1    KPJ03082.1    AJVK01006968    PCG79564.1    PCG79561.1    AGBW02013021    OWR44080.1    ODYU01002328    SOQ39679.1    JTDY01005909    KOB66490.1    AGBW02014973    OWR40799.1    BABH01041117    BABH01041118    KQ460325    KPJ15841.1    KPJ15840.1    BABH01041119    AJVK01021828    OWR41479.1    PZC76255.1    NWSH01002161    PCG69013.1    KZ150061    PZC74228.1    AGBW02009797    OWR49901.1    AJWK01009829    AGBW02010973    OWR47451.1    OWR47448.1    PCG79565.1    ODYU01003788    SOQ42986.1    QOIP01000011    RLU16525.1    KK852482    KDR22929.1    PCG66855.1    AJVK01064829    KK107403    EZA51300.1    KOB66936.1    NWSH01001466    PCG71160.1    KQ434870    KZC09576.1    KQ460205    KPJ16878.1    ODYU01001566    SOQ37955.1    SOQ42987.1    SOQ37441.1    KPI95921.1    PCG79572.1    RVE42198.1    PCG79559.1    GFDF01009262    JAV04822.1    GFDF01009261    JAV04823.1    DS232756    EDS45429.1    BABH01006647    CH902618    EDV41278.1    KQ980905    KYN11533.1    NWSH01002815    PCG67489.1    ODYU01001802    SOQ38502.1    OUUW01000002    SPP76400.1    GECL01000840    JAP05284.1    KPI95918.1    KPI95919.1    ODYU01005874    SOQ47209.1    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    KQ414585    KOC70516.1    NEVH01001354    PNF42889.1    PNF42891.1    KPI95922.1    CM000159    CH891970    EDW95499.1    EDX00097.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000007151    UP000053268    + More
UP000037510    UP000092462    UP000075882    UP000092461    UP000279307    UP000027135    UP000075881    UP000053097    UP000076502    UP000076407    UP000075901    UP000002320    UP000007801    UP000078492    UP000268350    UP000053825    UP000235965    UP000002282   

PRIDE

H9JI45    H9IVN2    H9JI53    H9JI54    H9IWG7   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JI45   A0A2A4K673   A0A194RFK1   A0A2W1BC35   A0A3S2TPZ8   A0A212EJ13   + More
A0A194PSG8   A0A212EJ20   A0A2H1VC91   A0A2H1VA76   A0A2A4K5R4   A0A2W1BRJ1   A0A3S2M6B8   A0A2A4K7E3   A0A3S2NIQ2   A0A3S2NA23   H9IVN2   A0A194PT22   A0A2H1V9B3   A0A0N1PI45   A0A194QI00   A0A212FPC5   A0A2A4K5Q2   A0A2W1BMH3   A0A1L8DEQ3   A0A0L7LKI8   A0A1L8DEI6   A0A3S2NDN7   A0A194RF43   A0A0L7KUG4   A0A212F2Q3   A0A194QDP3   A0A3S2L3J0   A0A3S2TCP3   A0A3S2L9U7   A0A2H1V9D8   A0A2H1V1L3   A0A2A4J5Q3   A0A194QC91   A0A1B0DMI4   A0A2A4K6M9   A0A182KSD5   A0A2A4K5Q3   A0A212ERF4   A0A2H1VFS1   A0A0L7KTQ3   A0A212EH35   H9JI53   A0A194RIS2   A0A194REW9   H9JI54   A0A1B0D118   A0A212EJ24   A0A2W1BRL6   A0A2A4JC88   A0A2W1BHB5   A0A212F848   A0A1B0CF89   A0A212F158   A0A212F123   A0A2A4K5P1   A0A2H1VQC6   A0A3L8D7U5   A0A067RSY2   A0A2A4J455   A0A1B0DJC6   A0A182JXE2   A0A026W5E8   A0A0L7KV39   A0A2A4JIA3   A0A154PCE9   A0A194RGD2   A0A2H1VAT9   A0A182WZR9   A0A2H1VQB3   A0A2H1V9G0   A0A194PR44   A0A2A4K7E5   A0A3S2NQS4   A0A2A4K663   A0A1L8DED6   A0A182SYI8   A0A1L8DED2   B0XDF1   H9IWG7   B3MAJ1   A0A195DF58   A0A2A4J6J0   A0A2H1VDM1   A0A3B0JLU9   A0A0V0GBF3   A0A194PSH3   A0A194PT27   A0A2H1W2A4   A0A1B6D578   A0A0L7RIG1   A0A2J7RPY7   A0A2J7RPY0   A0A194PRI3   B4IUN3  

PDB

4J05     E-value=0.0526957,     Score=87

KEGG

101745042    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0022857   GO:0016021   GO:0055085   GO:0005215   GO:0051536   GO:0006777   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

530

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

250.10149

Exp number, first 60 AAs:

22.67204

Total prob of N-in:

0.83444

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  134

TMhelix

135  -  154

inside

155  -  162

TMhelix

163  -  185

outside

186  -  194

TMhelix

195  -  214

inside

215  -  220

TMhelix

221  -  243

outside

244  -  246

TMhelix

247  -  266

inside

267  -  339

TMhelix

340  -  362

outside

363  -  365

TMhelix

366  -  388

inside

389  -  394

TMhelix

395  -  414

outside

415  -  423

TMhelix

424  -  443

inside

444  -  455

TMhelix

456  -  478

outside

479  -  481

TMhelix

482  -  504

inside

505  -  530

 

 

Pi

220.012004

Theta

175.757595

Tajima's D

0.727897

CLR

0.272325

CSRT

0.581570921453927

Interpretation

Uncertain