SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13497
Pre Gene Modal
BGIBMGA009191
Annotation
PREDICTED:_major_facilitator_superfamily_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.801
 

Sequence

CDS
ATGGGGTGGCTGAAGGGCTCCGTAGGGAGAGCTCGTCATACGGACGCCGAGGAAGACGACGTTAATTCGGACAAGCAAGCTCCCCATTTGGAAGTTCTGGAGACAGCAGACGAGAAACGCGCGCGGTGGCGCAGCGTGTACATCATCTACTTCACCATGTTCCAGATGTCATTGGGGTTTAGCATCGTGCTGACCGGAGTGTGGCCATACCTCGACAAGTTGGAGCCAGGTTCACAGAAAGAGATTCTTGGCGTGGCGGTGGGTGCCAACCCGCTGGGGCAGCTGTTGTTCTCTCCGCTGCTGGGGCTGTGGGCGAACCGGTCGGGCTCCGCGCGCGCCCCGCTGCTCGCCACCCTGGCGCTGTTCGTGCTGGCCAGCGCGCTGTACTCGCAGCTTCATCTGACCAGGCCCCACGCCAAGTACTGGATGGTGCTTGCCAGATTTTTAGTAGGAGTCAGCTCGGCCAACATAGCTGTGGCCCGCTCGTATCTTTCAGCCGCCACGCTGGTCAGCGAACGAACCCGAGCCGTGGCCATAGTGTCTCTGGCGCAAGTGCTGGGCTTCGTGGTGGGGCCGGCGCTGCAGGCTGCCGCTGCGCCCCTCGGCGCTGGCGCTCCCTATCCACCACCTGGAGACTTCTCCGTGCCCTTTAGGCTAGATATGTACACTGCTGCGGGCTGGATCAATGCTCTGTTGGGGACCATCAATTTTATATTGTTCTTGCCGTGGTGCTTTAAGGAGAAGAAGATTGCTGCCCGAGAAGCTATGATTGCCCAGGGGAAAGATTCAGAGAAAGAGGCTTTAGAATCCTTAAAGCCTGACCCAATCAGTAGCTGGACGCTGGTGGGCGCGTTCTTCGTGCTTGTGTTCAACTTCGTGCTGCTGGAGACGCTGGCGACGTCTCTGACCATGGACCAGTTCGCGTGGAGCAAGTCTCAGGCGCTGGAGTACATGGGCGCGCTGATGAGCGCCGGGGCGGTGGTTGCCTGCCTCACGTTCGCGATGATCGGACCTCTGACCAAGTTCTTCGAAGAACGGGCGCTGCTCCTGTGGGGTGGGTTTCTGCTGACGGGTATGGCGTCAGTGTTCTGCATCCCGTGGGGGCCGGGCCCGCCCCCCCTGGCGCCGCGCAACGCCACGGAGGCGGGCGGCGGCTGTCCGCAGCTCACGCAGCCCTGGTGCGCCAGCTCGCGCGGCCTCACCCTCACACAGTTCTTGATCGGCTATGCGTGCGTCTCGGTGGGATATTCTCTCGGAGTCACGCTCATACAAACAATCTTCTCGAAAGTATTGGGCCCGAGACCGCAGGGCGTCTGGATGGGCGTGCTGACCGGCGCGGGCTGCCTGTCCCGCGCGCTGGGCCCCGTGTTCGTGTCGGCGGTGTACGCGCGGCGCGGCCCCGACGCCACCTTCGGCAGCACGGCCGCGCTCACCCTGGCCGCGCTGTTCGCCCTGCGCCTCGTGTACGCACGCCTGCGACCGCCCGCCCTCACCCCCGACCCCACCCCCGCCGCACACGAGATGCAGCCCCTCCACAAAGACGACACGTGA
Protein
MGWLKGSVGRARHTDAEEDDVNSDKQAPHLEVLETADEKRARWRSVYIIYFTMFQMSLGFSIVLTGVWPYLDKLEPGSQKEILGVAVGANPLGQLLFSPLLGLWANRSGSARAPLLATLALFVLASALYSQLHLTRPHAKYWMVLARFLVGVSSANIAVARSYLSAATLVSERTRAVAIVSLAQVLGFVVGPALQAAAAPLGAGAPYPPPGDFSVPFRLDMYTAAGWINALLGTINFILFLPWCFKEKKIAAREAMIAQGKDSEKEALESLKPDPISSWTLVGAFFVLVFNFVLLETLATSLTMDQFAWSKSQALEYMGALMSAGAVVACLTFAMIGPLTKFFEERALLLWGGFLLTGMASVFCIPWGPGPPPLAPRNATEAGGGCPQLTQPWCASSRGLTLTQFLIGYACVSVGYSLGVTLIQTIFSKVLGPRPQGVWMGVLTGAGCLSRALGPVFVSAVYARRGPDATFGSTAALTLAALFALRLVYARLRPPALTPDPTPAAHEMQPLHKDDT

Summary

EMBL
BABH01041186    BABH01041187    KZ150327    PZC71378.1    RSAL01000426    RVE41764.1    + More
AGBW02009915    OWR49578.1    ODYU01004125    SOQ43667.1    NWSH01000100    PCG79556.1    KQ460313    KPJ16077.1    KZ288444    PBC25687.1    GAKP01018193    JAC40759.1    KQ976398    KYM92688.1    GFDF01009299    JAV04785.1    JRES01000502    KNC30590.1    KQ982327    KYQ57680.1    NNAY01003449    OXU19399.1    JXJN01009255    UFQT01000196    SSX21512.1    GBXI01014759    GBXI01005002    JAC99532.1    JAD09290.1    KQ978292    KYM95547.1    GDAI01002332    JAI15271.1    CCAG010000259    AAZX01002940    AAZX01007793    AAZX01013770    GL446779    EFN87271.1    KK852463    KDR23350.1    GL437023    EFN71250.1    JXUM01021216    KQ560594    KXJ81733.1    GECZ01025231    JAS44538.1    CH477563    EAT38955.1    KQ980905    KYN11506.1    KA644530    AFP59159.1    KQ981979    KYN31297.1    LJIG01001823    KRT85117.1    KQ435727    KOX77961.1    KQ434870    KZC09574.1    CP012525    ALC43775.1    CVRI01000074    CRL08149.1    CH963847    EDW73400.1    CH902618    EDV39070.1    DS232756    EDS45432.1    AAAB01008986    EAA00140.4    KQ414585    KOC70518.1    APCN01003305    KQ972004    EFA12971.2    OUUW01000002    SPP77519.1    AXCN02001021    GEZM01095831    JAV55313.1    AXCM01003135    CH916366    EDV96140.1    CH954178    EDV50493.1    CH379070    EDY74068.1    KRT08703.1    KRT08704.1    KRT08705.1    KRT08706.1    KRT08708.1    KRT08709.1    GBHO01045220    GBRD01015400    GDHC01014430    JAF98383.1    JAG50426.1    JAQ04199.1    CM000159    EDW93740.1    AE014296    AY069179    AAF50577.2    AAL39324.1    AGB94203.1    AGB94204.1    CM000363    CM002912    EDX09550.1    KMY98062.1    GGFJ01004163    MBW53304.1    CH480817    EDW50820.1    GGFJ01004164    MBW53305.1    GEDC01022848    JAS14450.1    CH940647    EDW69218.1    UFQS01003028    UFQT01003028    SSX15075.1    SSX34455.1    UFQT01000768    SSX27079.1    GBYB01000485    GBYB01000488    JAG70252.1    JAG70255.1    CH933809    EDW17977.2    KK107078    EZA60276.1    GEBQ01007359    JAT32618.1    CVRI01000004    CRK87274.1    GECL01002375    JAP03749.1    KQ459595    KPI95910.1    GFTR01006692    JAW09734.1    GBGD01001264    JAC87625.1    GBBI01005046    JAC13666.1    GDKW01002880    JAI53715.1    GFDF01009447    JAV04637.1    GAMC01008839    JAB97716.1    GL888070    EGI68201.1    DS235885    EEB20349.1    GGFM01004432    MBW25183.1    LBMM01011298    KMQ86909.1    KRT08707.1    NEVH01025127    PNF16080.1    CVRI01000035    CRK92704.1    CH479244    EDW37724.1    KRF84242.1    KMY98065.1   
Pfam
PF07690   MFS_1
Interpro
IPR011701   MFS        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
516
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
264.31811
Exp number, first 60 AAs:
15.02928
Total prob of N-in:
0.99958
POSSIBLE N-term signal
sequence
inside
1  -  44
TMhelix
45  -  67
outside
68  -  81
TMhelix
82  -  104
inside
105  -  110
TMhelix
111  -  133
outside
134  -  142
TMhelix
143  -  165
inside
166  -  176
TMhelix
177  -  199
outside
200  -  222
TMhelix
223  -  245
inside
246  -  280
TMhelix
281  -  303
outside
304  -  317
TMhelix
318  -  340
inside
341  -  346
TMhelix
347  -  369
outside
370  -  404
TMhelix
405  -  427
inside
428  -  438
TMhelix
439  -  461
outside
462  -  470
TMhelix
471  -  490
inside
491  -  516
 
 

Population Genetic Test Statistics

Pi
24.538056
Theta
194.459168
Tajima's D
0.048956
CLR
0.900676
CSRT
0.384630768461577
Interpretation
Uncertain
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