SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13496  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009186
Annotation
hypothetical_protein_KGM_17991_[Danaus_plexippus]
Location in the cell
Mitochondrial   Reliability : 1.868
 

Sequence

CDS
ATGTTCGTAACACGCCAAATTGCATCTAGGTTCTTCCAACAAACAGTGCGTCGCTACCATGGCGAAAGTCACTTCAAGCCCCCCACCATGGATGAATTACCAGTGCCCAAAGGCTCATGGCAGTCGCACCATGATGCCAACCAACGTCGCTTCAATGCTGTGCTCCTCTTTGGAATTGCATTCACTGCTGCTACATTCGTCGTTGCAAAAACATCAGGACTGGTCTACCTCAACTACTCGCCTCCCAAGTCCCTGGATTAA
Protein
MFVTRQIASRFFQQTVRRYHGESHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIAFTAATFVVAKTSGLVYLNYSPPKSLD

Summary

EMBL
AGBW02009915    OWR49577.1    RSAL01000426    RVE41765.1    ODYU01004125    SOQ43668.1    + More
KZ150327    PZC71380.1    NWSH01001853    PCG69914.1    KQ460313    KPJ16078.1    KQ459595    KPI95908.1    GAIX01005895    JAA86665.1    JTDY01003949    KOB68793.1    CH933809    EDW17816.1    KRG05777.1    KK852463    KDR23317.1    GDAI01001296    JAI16307.1    DQ440385    CH477563    ABF18418.1    EAT38957.1    GDHC01021588    JAP97040.1    GBHO01034305    JAG09299.1    EU073017    ABU49655.1    DS232756    EDS45434.1    JRES01001641    KNC21308.1    APCN01003311    AAAB01008986    EAA00530.3    GDKW01000382    JAI56213.1    KQ762400    OAD55911.1    GAPW01006628    GEHC01000373    JAC06970.1    JAV47272.1    DQ060075    EZ048874    AAY98019.1    ACN69166.1    GFDL01005514    JAV29531.1    KQ435987    KOX67726.1    GFDG01001483    JAV17316.1    AXCN02001739    DQ910327    ABI83749.1    CH902618    EDV39745.1    ACPB03006255    GAHY01000952    JAA76558.1    PYGN01003380    PSN29558.1    GFDG01001486    JAV17313.1    CH479214    EDW33447.1    CH379069    EAL29532.2    GFTR01001487    JAW14939.1    GAMD01003074    JAA98516.1    GGFJ01011097    MBW60238.1    GGFK01013124    MBW46445.1    GGFJ01011047    MBW60188.1    GGFM01000993    MBW21744.1    GGFK01013123    MBW46444.1    GGFL01006636    MBW70814.1    GBGD01003614    JAC85275.1    GAPW01006625    JAC06973.1    ADMH02000120    ETN67763.1    AAAB01008823    EDO64435.1    GEMB01004113    JAR99149.1    GBBI01001639    JAC17073.1    CP012525    ALC44971.1    CH940647    EDW69048.1    ATLV01022651    KE525335    KFB47859.1    CH963876    EDW76730.1    UFQS01000196    UFQT01000196    UFQT01002769    SSX01134.1    SSX34039.1    APCN01001410    GANO01004376    JAB55495.1    CH954178    EDV51973.1    AE014296    AY113572    AAF49346.2    AAM29577.1    CH480815    EDW41874.1    CM000363    CM002912    EDX10847.1    KMZ00225.1    CM000159    KRK02017.1    EDW94728.2    KK107063    QOIP01000005    EZA61213.1    RLU22538.1    CVRI01000047    CRK98548.1    GFDF01010783    JAV03301.1    KQ977935    KYM98582.1    JXJN01023976    AK417207    BAN20422.1    AJVK01009473    KQ414578    KOC71185.1    AJWK01028715    KZ288253    PBC30997.1    JR042318    AEY59593.1    NNAY01000926    OXU25868.1   
Pfam
PF16020   Deltameth_res
Interpro
IPR031973   Deltameth_res_prag01        + More
IPR036423   SOD-like_Cu/Zn_dom_sf       
SUPFAM
SSF49329   SSF49329       

Ontologies

Topology

Length:
86
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.28627
Exp number, first 60 AAs:
7.66029
Total prob of N-in:
0.99649
inside
1  -  53
TMhelix
54  -  76
outside
77  -  86
 
 

Population Genetic Test Statistics

Pi
218.723954
Theta
193.445391
Tajima's D
0.411268
CLR
0.091032
CSRT
0.492775361231938
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 PKCMKIKKGLYAFISENIMSLSPFFRSPFTDVTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLVSRRQISMCGHCSYDNTDNFRPFELSLIINNV 97.78 1e-30
28556443 YHGESHFKPPTMDELPVPK 100.00 7e-09
28556443 YHGESHFKPPTMDELPVPK 100.00 7e-09
28556443 TSGLVYLNYSPPK 100.00 7e-09
28556443 TSGLVYLNYSPPK 100.00 7e-09
28556443 TSGLVYLNYSPPK 100.00 0.003
28556443 YHGESHFKPPTMDELPVPK 100.00 0.003
28556443 VAPVFLPPLNK 100.00 0.003
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