Silkworm Genome Informatics Database

Gene

KWMTBOMO13486

Annotation

PREDICTED:_uncharacterized_protein_LOC106126637_[Papilio_xuthus]

Location

Bomo_Chr23(+):67301-67985 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.654

CDS

ATGTTCGGAATCAGGACTCCCCCACCGAAAAGCGACAACTCGTCCCCAAATTTGGATGAAGGGGCTCTCAATGTTAGACGCAGTATAGGCGAGTGGGAAGCGGCAAACGCTGATCCTACTCCATCAATGACATGCATGACGAAGCAGACTGGCCCTGCTACAAACCCGAAAGCTCGTCTAACTCCATCGCGGGACGCTTCAGCCGCAGCCGGACTTGGACCATCAACCGGAACCCACAGTCCACAAAAATTAAAGAACGCGGACCGTATTGCGGAGGCAAGAGCCTGCCTACACAAGGGCAAGCTACACCTTAACGCCTCTCGCAATACCAAAACAGAAATAAAGAGTGTGGTTTTCGAAGTTCTGGAGCGGTTGTATCAGCTTGTAAAGGAGGCTGAAGCAGCCCTAAAATCAAAAAAGCCTAAAGACGGAACTAACGCAACTGTGGGGCTAGAGCCGGTACCTATAGTCACTGACTCTACCTTCACAGTCAGCGAGGATCCTAAGCTATTGAGCAAAATAGAGGAGCACAGCAAATGCAAATAG

Protein

MFGIRTPPPKSDNSSPNLDEGALNVRRSIGEWEAANADPTPSMTCMTKQTGPATNPKARLTPSRDASAAAGLGPSTGTHSPQKLKNADRIAEARACLHKGKLHLNASRNTKTEIKSVVFEVLERLYQLVKEAEAALKSKKPKDGTNATVGLEPVPIVTDSTFTVSEDPKLLSKIEEHSKCK

Uniprot

Q9BLI5 H9JYD4 Q93138 A0A194PK06 A0A2A4ITW5 A0A212ELG0 + More
A0A2A4IY68 A0A2A4IZ95 A0A2A4J3W4 A0A2A4J4G0 H9JF11

Pubmed

11319268 19121390 7623845 26354079 22118469

EMBL

AB046668 BAB21511.1 BABH01043064 BABH01043065 BABH01043066 D38414 + More
BAA07466.1 KQ459606 KPI91425.1 NWSH01008050 PCG62714.1 AGBW02014077 OWR42301.1 NWSH01005595 PCG64112.1 NWSH01005109 PCG64433.1 NWSH01003374 PCG66426.1 NWSH01003138 PCG66881.1 BABH01033898 BABH01033899 BABH01033900 BABH01033901 BABH01033902

Proteomes

UP000005204 UP000053268 UP000218220 UP000007151

PRIDE

Q9BLI5 H9JYD4 Q93138 H9JF11

Pfam

PF14529   Exo_endo_phos_2        + More
PF00075   RNase_H
PF00078   RVT_1

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR012337   RNaseH-like_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000477   RT_dom
IPR036397   RNaseH_sf
IPR002156   RNaseH_domain

SUPFAM

SSF56219 SSF56219 + More
SSF53098 SSF53098

Gene 3D

3.30.420.10 3.60.10.10

ProteinModelPortal

Q9BLI5 H9JYD4 Q93138 A0A194PK06 A0A2A4ITW5 A0A212ELG0 + More
A0A2A4IY68 A0A2A4IZ95 A0A2A4J3W4 A0A2A4J4G0 H9JF11

KEGG

NA

GO

GO:0004523 GO:0003676

Length:

181

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00018

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04405

outside

1 - 181

Pi

363.728772

Theta

221.096397

Tajima's D

2.031366

CLR

0.659861

CSRT

0.884705764711764

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree