Gene

KWMTBOMO13481

Pre Gene Modal

BGIBMGA010875

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dehydrogenase/reductase_SDR_family_member_13-like_[Bombyx_mori]

Location

Bomo_Chr22(+):18433383-18434596      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.119

CDS

ATGAATGATTCGTTTAACATAAATACGAAGTTGCGTCGCGGCCTCCCACAGTATCGCCACGAGCGTGCCGACATGCTGATCGTAGTGCTGCTCATCGTCGCGTGTGCCATTGTCGTCGCTTTGTACCAGAAGCAAACCAATGGCGTGTGTCAGTCCCGACGGCGACTGGACGGGCGCACGGCAATCGTGACCGGCGGCACCAGCGGCATGGGGCTGCACATCGCCGAGGAGCTGGCGCGCCGCGGGGCCCGTGTCATCGTGGCCTGTCCCTTCCCCGCGGAGGGCGCCGCCGGCCTCGCGCATGTCCGGAGCCGCTCCGGGAACGATGATGTCGTCTTCAAGCTACTCGACCTGGGCTCGTTGGAGTCGGTGCGCGCGTTCGCCACCCACGTGCTCGCCACCGAGCAGCGCCTGGACATCCTCGTCAACAACGCCGGAGTCGGCGTCCCAGGCGACTTCCTCACGCGAGACGGCTTAAGTTTCATAATGCAAGTCAACTACTTCGGGACATTCCAGCTAACTCTGCTGCTCCTGCCGCTGCTGATCAAGTCCGGCTCCCCCGAGGATCCGAGCCGCATTGTGAACACTTCCTCGATAGCCCACTGGATCGGGACCGCGGACATGAAGCGGTTGACCGGTGCTGGCCACTACTGGCCTACCGTGAGGGTCTACGCGAACAGCAAGCTCTGTCTCGTGCTGTTCACGCACGAGCTCGCAAAGCGGCTGAGGGGCACTAACGTAGTCGTGAACTGCGTGGACCCGGGCGCCGTGGGCACCAGGATCTTCGAGTCGCTGAACAAGTTGGTCGGCATAGTGTTGAATGTCGCGGTGCAGTGCTTGTTTAAGACGGCGCGTCAGGGCGCGCAGACGGCTCTGCACGTGGCGCTGGACGAGGCCGCGGGGAGGGTGTCCGGCCAGTTGTTCAAGAACTGCGCCGTGTCCCGCGGGGCCGCGCGCGCCTACCGCGACGACACCGCGCTGCAGCTCTGGGATGAGTCGGCCCGGCTGGTCCACTTGACCCCCGCTCACATCGAAAAGTGCTTCCTCAGCTCGACATTTTAA

Protein

MNDSFNINTKLRRGLPQYRHERADMLIVVLLIVACAIVVALYQKQTNGVCQSRRRLDGRTAIVTGGTSGMGLHIAEELARRGARVIVACPFPAEGAAGLAHVRSRSGNDDVVFKLLDLGSLESVRAFATHVLATEQRLDILVNNAGVGVPGDFLTRDGLSFIMQVNYFGTFQLTLLLLPLLIKSGSPEDPSRIVNTSSIAHWIGTADMKRLTGAGHYWPTVRVYANSKLCLVLFTHELAKRLRGTNVVVNCVDPGAVGTRIFESLNKLVGIVLNVAVQCLFKTARQGAQTALHVALDEAAGRVSGQLFKNCAVSRGAARAYRDDTALQLWDESARLVHLTPAHIEKCFLSSTF

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

A0A2A4ITB8   A0A194RIT7   A0A194Q419   A0A2A4IU62   A0A0L7L6A3   A0A0L7KUI0   + More
A0A2H1WZT2   A0A0L7KPQ7   A0A2A4IXJ7   A0A1Q3G5H3   A0A212ER07   A0A0L7KQ04   A0A212FPM2   A0A1Q3G5L6   A0A212EU82   A0A060XYR4   A0A1S3T1P3   A0A3Q2WG38   A0A3P8QT63   A0A3P9CZU0   B5XFX9   A0A3P9QBB4   A0A1Q3G5G7   W5KNK5   A0A3B1JIS7   A0A1Q3G5J0   H2MF00   A0A3P9KM86   A0A3P9JMN0   I3JNM3   Q4T886   A0A3P9QC86   A0A3B3X5D4   H3CCX5   A0A0P5JH40   A0A3Q2XZD0   A0A3B3R4U6   A0A3B4FHR6   A0A3Q4GIG0   J3JYB7   A0A0P5JEC0   W5NAH8   E9GMH1   A0A3Q3GK66   H9JSL6   A0A060XZ33   A0A0N8E5H6   E9GHT3   A0A0N1IF98   A0A0P6BK02   A0A3B3Z2H4   B9EM34   W5MC19   Q6DBT2   A0A3B3TIT3   A0A3B3V363   A0A3B5QHF7   A0A0N0PAN9   A0A2I4CNU5   A0A2D0SU13   A0A3B3XX98   A0A1W4ZTW7   A0A3P9QBA9   A0A2I4CSL0   G3PK83   A0A087XDQ1   A0A0P5LP62   A0A3Q2Q9S4   A0A0P6HW35   A0A0P5LS57   A0A096LXI8   A0A3B3YMD5   A0A3B3YMC8   A0A3B3V349   A0A210QNT6   B5UAY9   A0A3B4DPN6   A0A147ATY0   A0A2H1W6X7   A0A0N0PAY1   A0A369RZQ8   A0A2J7PGY1   H2RJU8   A0A0P6AB97   A0A3B5AAH5   A0A3B3CX44   A0A212F5B7   B3SEC9   A0A0P5Z0D2   B3S539   A0A2J7PGT7   A0A3Q1D2K4   A0A3P9QB96   A0A0P6AMA3   A0A3Q1CHZ5   B3RKN4   A0A0L7L5N4   A0A3B5AMY0   A0A2J7PGU9  

Pubmed

26354079    26227816    22118469    24755649    25186727    20433749    + More
25329095    17554307    15496914    29240929    22516182    21292972    19121390    23594743    23542700    28812685    30042472    21551351    29451363    18719581   

EMBL

NWSH01007554    PCG62919.1    KQ460323    KPJ15856.1    KQ459586    KPI98155.1    + More
NWSH01006838    PCG63219.1    JTDY01002635    KOB71043.1    JTDY01005737    KOB66679.1    ODYU01012310    SOQ58563.1    JTDY01007639    KOB65051.1    NWSH01005562    PCG64128.1    GEYN01000199    JAV44790.1    AGBW02013197    OWR43884.1    JTDY01007637    KOB65054.1    AGBW02001598    OWR55702.1    GEYN01000178    JAV44811.1    AGBW02012471    OWR45004.1    FR905938    CDQ82249.1    BT049948    ACI69749.1    GEYN01000196    JAV44793.1    GEYN01000179    JAV44810.1    AERX01056321    CAAE01007865    CAF90896.1    GDIQ01200010    JAK51715.1    BT128242    AEE63202.1    GDIQ01201309    JAK50416.1    AHAT01005059    GL732552    EFX79364.1    BABH01032240    FR905967    CDQ82399.1    GDIQ01059860    JAN34877.1    GL732545    EFX80894.1    KQ461133    KPJ08897.1    GDIP01013477    LRGB01000243    JAM90238.1    KZS20137.1    BT056709    ACM08581.1    AHAT01005764    AHAT01005765    AHAT01005766    CR457447    BC078374    AAH78374.1    KQ458665    KPJ05596.1    AYCK01019623    AYCK01019624    GDIQ01170520    JAK81205.1    GDIQ01013354    JAN81383.1    GDIQ01166025    JAK85700.1    NEDP02002617    OWF50392.1    AB439581    BAG72431.1    GCES01004781    JAR81542.1    ODYU01006737    SOQ48855.1    KPJ08898.1    NOWV01000110    RDD40168.1    NEVH01025161    PNF15592.1    GDIP01044918    JAM58797.1    KZS20139.1    AGBW02010210    OWR48927.1    DS985430    EDV18917.1    GDIP01051222    JAM52493.1    DS985250    EDV22198.1    PNF15542.1    GDIP01027265    JAM76450.1    DS985241    EDV29193.1    JTDY01002853    KOB70599.1    PNF15560.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    UP000193380    + More
UP000087266    UP000264840    UP000265100    UP000265160    UP000242638    UP000018467    UP000001038    UP000265180    UP000265200    UP000005207    UP000261480    UP000007303    UP000264820    UP000261540    UP000261460    UP000261580    UP000018468    UP000000305    UP000261660    UP000005204    UP000076858    UP000000437    UP000261500    UP000002852    UP000192220    UP000221080    UP000192224    UP000007635    UP000028760    UP000265000    UP000242188    UP000261440    UP000253843    UP000235965    UP000005226    UP000261400    UP000261560    UP000009022    UP000257160   

PRIDE

H9JSL6   

Pfam

PF00106   adh_short        + More
PF03096   Ndr

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR004142   NDRG       
IPR029058   AB_hydrolase       

SUPFAM

SSF51735   SSF51735        + More
SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

ProteinModelPortal

A0A2A4ITB8   A0A194RIT7   A0A194Q419   A0A2A4IU62   A0A0L7L6A3   A0A0L7KUI0   + More
A0A2H1WZT2   A0A0L7KPQ7   A0A2A4IXJ7   A0A1Q3G5H3   A0A212ER07   A0A0L7KQ04   A0A212FPM2   A0A1Q3G5L6   A0A212EU82   A0A060XYR4   A0A1S3T1P3   A0A3Q2WG38   A0A3P8QT63   A0A3P9CZU0   B5XFX9   A0A3P9QBB4   A0A1Q3G5G7   W5KNK5   A0A3B1JIS7   A0A1Q3G5J0   H2MF00   A0A3P9KM86   A0A3P9JMN0   I3JNM3   Q4T886   A0A3P9QC86   A0A3B3X5D4   H3CCX5   A0A0P5JH40   A0A3Q2XZD0   A0A3B3R4U6   A0A3B4FHR6   A0A3Q4GIG0   J3JYB7   A0A0P5JEC0   W5NAH8   E9GMH1   A0A3Q3GK66   H9JSL6   A0A060XZ33   A0A0N8E5H6   E9GHT3   A0A0N1IF98   A0A0P6BK02   A0A3B3Z2H4   B9EM34   W5MC19   Q6DBT2   A0A3B3TIT3   A0A3B3V363   A0A3B5QHF7   A0A0N0PAN9   A0A2I4CNU5   A0A2D0SU13   A0A3B3XX98   A0A1W4ZTW7   A0A3P9QBA9   A0A2I4CSL0   G3PK83   A0A087XDQ1   A0A0P5LP62   A0A3Q2Q9S4   A0A0P6HW35   A0A0P5LS57   A0A096LXI8   A0A3B3YMD5   A0A3B3YMC8   A0A3B3V349   A0A210QNT6   B5UAY9   A0A3B4DPN6   A0A147ATY0   A0A2H1W6X7   A0A0N0PAY1   A0A369RZQ8   A0A2J7PGY1   H2RJU8   A0A0P6AB97   A0A3B5AAH5   A0A3B3CX44   A0A212F5B7   B3SEC9   A0A0P5Z0D2   B3S539   A0A2J7PGT7   A0A3Q1D2K4   A0A3P9QB96   A0A0P6AMA3   A0A3Q1CHZ5   B3RKN4   A0A0L7L5N4   A0A3B5AMY0   A0A2J7PGU9  

PDB

3RD5     E-value=8.95851e-19,     Score=229

KEGG

101744601    no KO assigned | (RefSeq) dehydrogenase/reductase SDR family member 13-like

GO

GO:0016491   GO:0016021  

PANTHER

PTHR11034  

Length:

353

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

26.21966

Exp number, first 60 AAs:

19.29536

Total prob of N-in:

0.61638

POSSIBLE N-term signal

sequence

inside

1  -  25

TMhelix

26  -  43

outside

44  -  353

 

 

Pi

15.580967

Theta

13.522957

Tajima's D

0.950515

CLR

3.221877

CSRT

0.655967201639918

Interpretation

Uncertain