Silkworm Genome Informatics Database

Gene

KWMTBOMO13479

Pre Gene Modal

BGIBMGA010873

Annotation

Uncharacterized_protein_OBRU01_09871_[Operophtera_brumata]

Location

Bomo_Chr22(+):18391943-18393969 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.672

CDS

ATGGCCTCCGAGCACCCCATGGCCGACAGACTCGACCGAAGCTACTTCGGATTTGATCAAGACTATTACGAACGAATGCCGCTACTAGTCAACGCCCTCCAAGAAAACAGTTATATCGACCCTGCCATTGAATTTATTCCGGCGTCAAAAACAGCTAACCAGATCCACGGAAACGTCAGGCCACCGACCTCCACTGTGGGCAATTACAGGCAGAACGCCTTTAGAAGAACCAGTCCCAGACCTTTTTTATTTGAATACAGAACCTCGACTCCTCTCCCATACAGCAAGACGTATGGCTCCAGGAGTTGGGTAGAAAAATATCGCAATGCACAAAGATTGCAAAACATCAGACAAATTATAAAGTACTTGGAAAAAACTATTAATGCTAGGTCTGGGGATATGTACTCGTACACGAAGCCGGGCGGCGCGCCGGTCGCGTTCACCGGTGTGTACATGGAGCACAGCTTGGATAATCAAAATTCTCATAGAAGCAAAGACTTAATCACACAAGATTCGACGATGGTTGAAATAAAAAAATCCAATCACCAACCTGATCCTTTGTTCAATTTCAAACCGGAAAATCCCGGAGAAGTCAATCTTCTAGCTGACGCTTTCTTTAGGTTTTCTCCGTGGCAATTCCAAAAATCCGTAGAAACTTCTAATAAAACTCCGATTGTTAGAAAAAGTTTCAACAGCAAAAGATATTACAATACCAAAATTCAAAACCACAACACAACACGAGGTGACAACGCATCATCTACTGCCGCCGACTCATTCAGTGTTATACTTAATTTGTTTCCGCTCAGCGCAAAGACAAAGGGAGACGTGCGTGCTGAAGACGCTACAGCTAAACAACTTTCTAACTTAGACACTCTTTACATCACTACATCACGGCCCATTTTTCAGTTCAAGAGGAAGCCGACTATCTCTGTTCCGCGCACTTTTGTCCGAAGGAAACCGCGGGTTTTATACAAGCACAAAGACATTTATTCAACTAATAAAATAGCATCTATGCAAAGCAGGGACGCAAACAAAACCCAACTAGTAGCAGATGTCGATCCAAGTGTCAGCATCGGCACAAATATTATACTTCACGTAAACGTGCATCCCAAAGATACACAAATGAAAAACACACTGCTAAAAGATTTCAATATTGATCCTGCAACACAAGATATGACCCAGCCAACGCCCACGACGACGGCAGCTCCAACAACCATCACCTTGTCGACCCATCAAGTCAATGACTTCCACATAGGTAGTTCCGGAATAGTTCCAGAAGCCGAGAGAAGAGCGACAACACTGCCGGGGCCAAAAGTTACTGAATTGAATATTATGCCGTCCTTGGATACGAGTGAGACTCAACGAGACCAGTCCACAGTGACACCCTGGACCGGACCTACAGAAGTGCTCAGATTCAGTCATGAAGACGCAAAGGTACCTGAGCAATACAGTATTCAATTACAAAAATATAAAATCGAGGAGGCTGCTGCCGCAAATACCAGAAAGGTTTTTCGCGGGCAAAGTCAGCCTTCCGACGAAGAGAAGGAAATTATTATCATCAAACTAAAAAATGAAAATATCACGGAGGTTACGACGGATCCGTCCACAACAGATGTTGGGGAGAGCACGCCGCGCTGGACGTACGTGCCGCTGTTGAACGGACATTACAGGAGCACGAAGCAGAGCGCGAGCGGCCCCTCCCTGCGGACGCGCTCCCGGGACGACCAGAGCACCAGGCAACGACCGCCCGGATATGTGCCCGTGTATGTTGAAATCAATCGTAACAAGACTACCGCGATCCACACAATCTCCAATGATGATGAGTGA

Protein

MASEHPMADRLDRSYFGFDQDYYERMPLLVNALQENSYIDPAIEFIPASKTANQIHGNVRPPTSTVGNYRQNAFRRTSPRPFLFEYRTSTPLPYSKTYGSRSWVEKYRNAQRLQNIRQIIKYLEKTINARSGDMYSYTKPGGAPVAFTGVYMEHSLDNQNSHRSKDLITQDSTMVEIKKSNHQPDPLFNFKPENPGEVNLLADAFFRFSPWQFQKSVETSNKTPIVRKSFNSKRYYNTKIQNHNTTRGDNASSTAADSFSVILNLFPLSAKTKGDVRAEDATAKQLSNLDTLYITTSRPIFQFKRKPTISVPRTFVRRKPRVLYKHKDIYSTNKIASMQSRDANKTQLVADVDPSVSIGTNIILHVNVHPKDTQMKNTLLKDFNIDPATQDMTQPTPTTTAAPTTITLSTHQVNDFHIGSSGIVPEAERRATTLPGPKVTELNIMPSLDTSETQRDQSTVTPWTGPTEVLRFSHEDAKVPEQYSIQLQKYKIEEAAAANTRKVFRGQSQPSDEEKEIIIIKLKNENITEVTTDPSTTDVGESTPRWTYVPLLNGHYRSTKQSASGPSLRTRSRDDQSTRQRPPGYVPVYVEINRNKTTAIHTISNDDE

Uniprot

H9JMX0 A0A2A4IW00 A0A2H1X0T3 A0A3S2L7A1 A0A0L7LFU8 A0A212ERA4 + More
A0A194PYJ0 A0A194RE95

Pubmed

19121390 26227816 22118469 26354079

EMBL

BABH01028988 BABH01028989 BABH01028990 BABH01028991 NWSH01005747 PCG63985.1 + More
ODYU01012515 SOQ58868.1 RSAL01000106 RVE47301.1 JTDY01001305 KOB74249.1 AGBW02013082 OWR43999.1 KQ459586 KPI98093.1 KQ460323 KPJ15912.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000037510 UP000007151 UP000053268 + More
UP000053240

PRIDE

H9JMX0

Pfam

PF00028 Cadherin

Interpro

IPR015919   Cadherin-like_sf        + More
IPR020894   Cadherin_CS
IPR002126   Cadherin-like_dom

SUPFAM

SSF49313 SSF49313

ProteinModelPortal

H9JMX0 A0A2A4IW00 A0A2H1X0T3 A0A3S2L7A1 A0A0L7LFU8 A0A212ERA4 + More
A0A194PYJ0 A0A194RE95

KEGG

101739815 no KO assigned | (RefSeq) uncharacterized LOC101739815

GO

GO:0016021 GO:0005886 GO:0007156 GO:0005509

Length:

608

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0021

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00075

outside

1 - 608

Pi

12.760735

Theta

8.639102

Tajima's D

1.274909

CLR

0.277173

CSRT

0.752262386880656

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics