SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13473  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010880
Annotation
PREDICTED:_MATH_and_LRR_domain-containing_protein_PFE0570w-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.74
 

Sequence

CDS
ATGCAGTCCAACAGAGTAGTGGACAGAGTGACTCGAGCTAATCAAGAGCCTGAAAAACGTCGCATCAGTAAAGTATATAAAGATATAGGAAAGAGTGATAGAGAAAAAAATACTGAAATGGGTGATGAAGTTATTTCTGAGTCGAGTTTTGTAGATGTAAACATAGACGAACGGCGTGGTGAACCTAGATATGAAATCAAACATCAAAACCATAAATCTGAATACACGCCTGTTGGAAACAAAAAGGCAATTACATTGGAAGATTACCGAAACCAAAAAAACACTGGAAAAAATCTTACAGAAATAAATACCGCAATAACAATGTCACCAATTCAAAGAACATCAAGGCAAAGACGGCCATCTTCAATATCAATGTTTGATGTTTCTGAATTCTTACCAATTAGATCAGAAACCCAAAATGTCGCTGCATCTAATACTATCCGAAGAACAATGACAACAATACCACCATCTAATTCTAAATCCACTGCATCAACAATTGTGACATCAGATAAATCTGTAGAAGACGATGAAAGTGGAGAAGAATACGAAGATTATGAGGATGATGAAGACGAAGAAACCGAAGAACAAACACTAACGACAACCACTACAACCACTCAGAAGCCGACCTTGAAACGAAGAAGAATTGTAACAACAACTGTAGCCACGCACACAGAACGAACTACAGAGCTCAGTGAGCCTAAACTAAGATTAGTAACGAGGTTCCGAGGATATAATCCAGATCAACATAAGAAACAAATGCATAGTGATCATACAGAATCGACAGAAAAACAAAAACTAAAAGAAATGCCACATAGAAGAGATTCTTCTGAAATTGATGCTCTAAAATATAGGGAAAAGAAAAATAAAAGTTCAAAGAGCACTATAGTTACAGACACCAAAAAATATGGTGATGATAACGACGGTATGAAAGAAGAAGAATTGGACGCTATGATTGGTGTAAAGCACGATATTAAAGAATATATGCCTGAATATGAAAAGCAAAATAAACAGAAGTATAAAGATTCCTCTGAAGAAGATTATGAGGATAGTTTAGAAAATTTCGATGACGATGATGAAGATAATACAAATGAAGAGGAGGCACATGATGAAGAAGAAGAGGTAGAAAATAATGAAAAAGAGAATCCAATACCCACAACGCCTGAACCTACTAAGCGTACCCTTGTTCGGACAACTGATGCACCTACACCTACTGTGGCCTCTCATAATACCAAAATAGTACTCAAGCCTGTTATATCGAGAAAAAAAATCGAAATACATAAAGAGCTGCCTGTCGACAAGACTTCACCACACGTGACGCAATTTAAACAAGATATAAAAGAGGTAGAAGTAATTAAAGAAGTTACCCCAGCTCCTAAAAGGCACCTTAAAAAACAAAAAGAGGCATTAGAACTCTATAAGGATGATAGGCTGGCGAAAGAAATTAATAACTTAGGAGACGTGGAAGTTTTTAAAGAAAATCTCGATTTAGAGAATAGTCCACGTCATGGTGGCAATTACAGAAGTATTGAGGATGTAACAGAATCAAATCCTATCGCAAATTTACAGTCTAAAGTACCTAAAGACGCAGTAGCATCACAGAGTGAGAATACAAGGCACAACATCGAACTCGATGAATATTCTCCTAGGAGGATGCATGGCGGTAATTTGAAATCAATTGGTGACATTCCGAAATCTAGAAGTAATCATAATTCTAAATTCACTGATCCAGGGAGTAATACAAACTCACGAAATGCAATGCGAAGTGGTAATGCGCAACTTGACTCGCGTCCTAGTCGCGGTAGAAATAAATTTGAGAGGTTGGAGGAACTAACAGACGACAGTTACAGAGAAGATTACTCGAAAGACGAAAACTACAAAAATGTCCACAACAATAGAAGAGGCCAAGCTATGCACGGCGGAAACTACCGTAGTGCCAAAATTGTACAAGCAGATTCAGAGAAATCAGAAGAAAACGATTACGATATCCGAGTTAGACCGGATAAATCCCAGGACGCTGGGAAAGATCCTGCAGTATTGCTTAATAGTTTCGCGCAGGCTATTCCTATTTTGACTACGACCCCTGCCTATATTTTAGACCCTAGCAAACGTATGTATTATTATGTTGAAGCATAA
Protein
MQSNRVVDRVTRANQEPEKRRISKVYKDIGKSDREKNTEMGDEVISESSFVDVNIDERRGEPRYEIKHQNHKSEYTPVGNKKAITLEDYRNQKNTGKNLTEINTAITMSPIQRTSRQRRPSSISMFDVSEFLPIRSETQNVAASNTIRRTMTTIPPSNSKSTASTIVTSDKSVEDDESGEEYEDYEDDEDEETEEQTLTTTTTTTQKPTLKRRRIVTTTVATHTERTTELSEPKLRLVTRFRGYNPDQHKKQMHSDHTESTEKQKLKEMPHRRDSSEIDALKYREKKNKSSKSTIVTDTKKYGDDNDGMKEEELDAMIGVKHDIKEYMPEYEKQNKQKYKDSSEEDYEDSLENFDDDDEDNTNEEEAHDEEEEVENNEKENPIPTTPEPTKRTLVRTTDAPTPTVASHNTKIVLKPVISRKKIEIHKELPVDKTSPHVTQFKQDIKEVEVIKEVTPAPKRHLKKQKEALELYKDDRLAKEINNLGDVEVFKENLDLENSPRHGGNYRSIEDVTESNPIANLQSKVPKDAVASQSENTRHNIELDEYSPRRMHGGNLKSIGDIPKSRSNHNSKFTDPGSNTNSRNAMRSGNAQLDSRPSRGRNKFERLEELTDDSYREDYSKDENYKNVHNNRRGQAMHGGNYRSAKIVQADSEKSEENDYDIRVRPDKSQDAGKDPAVLLNSFAQAIPILTTTPAYILDPSKRMYYYVEA

Summary

Ontologies

GO

Topology

Length:
710
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.44786
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00234
outside
1  -  710
 
 

Population Genetic Test Statistics

Pi
14.748977
Theta
7.666328
Tajima's D
0.892883
CLR
0.238916
CSRT
0.646367681615919
Interpretation
Uncertain
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