Pre Gene Modal
BGIBMGA010887
Annotation
PREDICTED:_putative_rRNA_methyltransferase_[Papilio_machaon]
Location in the cell
Nuclear Reliability : 4.693
Sequence
CDS
ATGGAATCTTCTTCGGAGGATAGTTTTTTGTGGTCAGATGCTTCTATTGATACATCTGATAGAGAAGAAATGGCAAAAGCTACAAATATAAATCAATCAGATGTAGACTCTGAATATGGACAGAGCTATAAAAAGAAACTTCACAAAGAACTCTTTGTAAATGGTGAACATGAGACAGAATCTAGGGATCAACCAACAGAAAAGAGTAGGAAAAGAAAAATTAAGACTGAGAAAACTGAAGAAACTGACAGTCCTAAGAAAAAAAAAATTAAGGTTGAACCTGAAAGTGATATTGAATTGAAAAATAATTCTAAGCACAGATTATCAGTAAACCAACAACATTTACCAGATGATGACTCAACTTATGATGAGAGCTATTTGAATCTACGAGTAAAACAAGAGCAAACATTCACAATTCCATCAGCACAAAAAAAAAGAAAGAAAAACCACAAGAGTGAGTCTGTGGTAAATTCTGAAAATGAAATTGAGTCAAACACCGAAAATAACAATGTTATTGCTGAATCTAACTTTGAGACTAGTACTTTGAGTCACCAAGCAGATTCTGAAGATTATGAAAGTAAAGCTAAAAAAAAGAAAAAAAAATCAAGAAATAAAAGTGAATCCACTGAGCAAGAAACTATCATTGAAGAAAAATTTACTGCTGAAGAGACTGTTGTAGAAACAAGACAACCAATAAGTAGTAGTGATTGCGATGCTAAGAAATCTTCAAAAGAAAATTTAGACAAAAGAAAAAAAAAGAAACATATACATAGCCACAGTGACTCTGAAGACAATGAAGAAGGGTCGAAAAATCGAACTGTTTCATGTCCAGAAGCTGTACGAGATCATGATATGCCAGAAATTGTAAATACCAAAACATCTAGAACAATATCAGAGAGAATTAGATTTGAGGAAGAAGAATCAGATATAGATGTTAGAACACTCGATAACCAATCCAGAAAGTTGAGAAACTATTTAAAAGCAAATGTAAATTTGAAGCCTGCTCTAGATCATTTGAAGGAGGAGGCACTTGTAACATCAGATGATGAGATATTTCTTATAAAATGTCCCAGTATAATTGATTTAGCTGCTTTCAAAGGTGTCAAAATCAATTTAGACAAAAAATGTAAAATAAAAATTAATAATCAGACGTATGAATGTAATTGGGACGAAGGAAAAAATAAGATAGCTGTTTTATCTCGTAATAAGAATAAAACTGTAATAAAAGGTTTACCTGTTAATGGTATGTTGTGTCTAAGAAAAAGAATACCAAAATTACATATACGAGAAGAGAATTATATGATAAATAATCAAAATAATTTTATCCCATTATTAGATACTAAATGTAGACATCCATTGTTTGGTGCAAATTACAAAAAAGCAATTAAAATACCTTTTTCTGTAGCTGAGAGATTGAGGGAAGTTGATCAACCACAAGATATTGATATTGTTGATATTGAATCGGAAAAGACTAAAAAGAAAAAAAAGAAAAAGGATAAGATAAAAATAGAAACAAGCTATGTTGAAAAGGATAATGAACAAACTAATGCTGAAGAGCTACCTCCCAAAAAGAAAAGTAAGAAACATAAACACACAAAAGAAACAGAAAAAGTTAAATCAAAGAAAACAAAACAAAAGAGACATAATTTAGACACTGCAGAAGCTTGGGAATCTGAGAAAGCTATAGAGGAGAGTCTCTTTAACTTTTAA
Protein
MESSSEDSFLWSDASIDTSDREEMAKATNINQSDVDSEYGQSYKKKLHKELFVNGEHETESRDQPTEKSRKRKIKTEKTEETDSPKKKKIKVEPESDIELKNNSKHRLSVNQQHLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENEIESNTENNNVIAESNFETSTLSHQADSEDYESKAKKKKKKSRNKSESTEQETIIEEKFTAEETVVETRQPISSSDCDAKKSSKENLDKRKKKKHIHSHSDSEDNEEGSKNRTVSCPEAVRDHDMPEIVNTKTSRTISERIRFEEEESDIDVRTLDNQSRKLRNYLKANVNLKPALDHLKEEALVTSDDEIFLIKCPSIIDLAAFKGVKINLDKKCKIKINNQTYECNWDEGKNKIAVLSRNKNKTVIKGLPVNGMLCLRKRIPKLHIREENYMINNQNNFIPLLDTKCRHPLFGANYKKAIKIPFSVAERLREVDQPQDIDIVDIESEKTKKKKKKKDKIKIETSYVEKDNEQTNAEELPPKKKSKKHKHTKETEKVKSKKTKQKRHNLDTAEAWESEKAIEESLFNF
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF08208 RNA_polI_A34
Interpro
IPR013240
DNA-dir_RNA_pol1_su_RPA34
ProteinModelPortal
Ontologies
GO
Topology
Length:
569
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00020
outside
1 - 569
Population Genetic Test Statistics
Pi
17.19184
Theta
15.998815
Tajima's D
0.441882
CLR
0.783999
CSRT
0.507974601269937
Interpretation
Uncertain
