SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13451
Pre Gene Modal
BGIBMGA010865
Annotation
PREDICTED:_probable_cytochrome_P450_313a1?_partial_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.124 Mitochondrial   Reliability : 1.636
 

Sequence

CDS
ATGATCATCGCCGGCACCGATACTTCGGCCATCGGTATATCCTTCACGTTACTCATGCTGGCCCGATATCCTGATGTACAAGAGAAAGTCTACCAGGAGATCCAGGAATTGTTCGGTGACTCAGAGAGGCCGCCCGAAGTGGAAGACATCCATCGTCTTCTGTACTTGGATGCAGTGATCAAAGAAGCGATGCGATTATATCCTCCGGCGCCAGTCATCATAAGGAAAGTCGAAAGAGAAACTAAACTGCCATCCGGATTAATACTGCCGCGGGACATTGGGATTTTAATACCAATCTGGTCCGTGAACCGCAATCCTAAGTACTGGGGCGACGACGCCGATGTATTTAGACCCGAGCGGTTTTTGGATGGTACCAAAAAACATCCAACAGCATTCATGACGTTTAGCCAGGGACCGAGAGCTTGTCTAGGCTTTAAGTTCGCTATGAACTCAGCTAAGGCGGCTCTGGCTTCCATCCTTCGCCATTACCGCATCAAACCACCGTCAGAACTGACCTCAATGTCCCCAGGACAATACCCTCCCATCAGGGTCAAGTTTGCCCTAATGACGAGGGACGTTGATAATTTCAGAATACAATTAGAATCTAGATCGTAA
Protein
MIIAGTDTSAIGISFTLLMLARYPDVQEKVYQEIQELFGDSERPPEVEDIHRLLYLDAVIKEAMRLYPPAPVIIRKVERETKLPSGLILPRDIGILIPIWSVNRNPKYWGDDADVFRPERFLDGTKKHPTAFMTFSQGPRACLGFKFAMNSAKAALASILRHYRIKPPSELTSMSPGQYPPIRVKFALMTRDVDNFRIQLESRS

Summary

Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01039691    AB436841    BAM73795.1    NWSH01001465    PCG71165.1    ODYU01003376    + More
SOQ42053.1    KX443471    ASO98046.1    AB795798    BAQ56325.1    PCG71164.1    PCG71161.1    KM016716    AID54868.1    LC326250    BBA58211.1    KX425016    ASN63843.1    JTDY01007865    KOB64900.1    KM016717    AID54869.1    GCVX01000088    JAI18142.1    JTDY01006414    KOB66031.1    GCVX01000053    JAI18177.1    GCVX01000092    JAI18138.1    ODYU01011123    SOQ56666.1    NWSH01007729    PCG62839.1    SOQ42054.1    RSAL01000100    RVE47555.1    GDQN01000461    JAT90593.1    KP001145    AJN91190.1    BABH01037064    BABH01037065    GCVX01000090    JAI18140.1    GCVX01000087    JAI18143.1    KQ459586    KPI98133.1    BABH01037061    AGBW02008898    OWR52238.1    KPI98000.1    JTDY01002945    KOB70438.1    KQ460883    KPJ11283.1    GCVX01000086    JAI18144.1    ODYU01007567    SOQ50447.1    KY212088    ARA91652.1    KQ460323    KPJ15874.1    NWSH01008140    PCG62679.1    AGBW02015005    OWR40717.1    KF701170    AHW57340.1    KPI98134.1    KF701175    AHW57345.1    KPI97998.1    KPJ11285.1    KPJ11284.1    SOQ56667.1    RSAL01000018    RVE52820.1    SOQ50448.1    KC789756    AGO62011.1    NWSH01005164    PCG64388.1    KX443470    ASO98045.1    KPJ15875.1    AB201381    BAD99563.1    JX310094    AFP20605.1    MH138207    AXP17148.1    KY212090    ARA91654.1    MH138215    AXP17156.1    KPJ11286.1    JTDY01009042    KOB64169.1    RVE52821.1    BABH01037067    BABH01037068    KY212089    ARA91653.1    GDHC01018604    JAQ00025.1    BABH01037058    BABH01037059    JTDY01007639    KOB65052.1    KP091899    AKQ00287.1    KY348795    AUX13052.1    KZ149894    PZC78854.1    NWSH01000444    PCG76362.1    KPI97999.1    GBRD01008662    GBRD01008659    JAG57162.1    GBRD01008658    JAG57163.1    ODYU01000688    SOQ35886.1    GDHC01006464    GDHC01006386    GDHC01002833    JAQ12165.1    JAQ12243.1    JAQ15796.1    KM016722    AID54874.1    UYYA01000750    VDM54593.1    KP001140    AJN91185.1    JARK01001387    EYC11273.1    BABH01012758    AK343188    BAM73878.1    JN160688    AGC22877.1    AGBW02013301    OWR43639.1    EU546147    ACD76734.1    UZAF01018368    VDO50926.1    KQ458981    KPJ04476.1    JPKZ01001207    UYWY01023609    KHN83257.1    VDM47778.1    KQ460882    KPJ11479.1    KQ459299    KPJ01870.1    CH902617    KPU79450.1    GCVX01000055    JAI18175.1    AXCM01008551    NWSH01001018    PCG73089.1    JXUM01053525    KQ561780    KXJ77562.1   
Pfam
PF00067   p450
Interpro
IPR036396   Cyt_P450_sf        + More
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR001878   Znf_CCHC       
IPR002403   Cyt_P450_E_grp-IV       
IPR002402   Cyt_P450_E_grp-II       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C93     E-value=3.0542e-25,     Score=282

Ontologies

Topology

Length:
204
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.43963
Exp number, first 60 AAs:
0.40168
Total prob of N-in:
0.11454
outside
1  -  204
 
 

Population Genetic Test Statistics

Pi
15.593858
Theta
17.249848
Tajima's D
-0.382763
CLR
10.17066
CSRT
0.272186390680466
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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