SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13445
Annotation
PREDICTED:_uncharacterized_protein_LOC105841489_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.106
 

Sequence

CDS
ATGTACATAGAGGCTGAATGCCCGAAGTACAACAGGTACTACCTCTGCGAGGAAAATATAAATCACCAGCCAAGAGATGACCCTGATTGCATCCACGATCTTATCTACAATCAAGCCATGAACACTTCATGCCAGCCAACCTCTGTTTCTTTCACTAAAGAAGCCATGGAACAACTAGACGATAAGCATTACGTCCTTATTTTCCCCGAGACCACGAAGATCGAACTTCATTGTCAACGCCTGGAGTACAGTACGCTTCAAGGAAGTTATCTCGTTACCATTCCGCAAAATTGTAAGCTGCGAACCGGACGACTAACACTGGCAAACAATAATGATCAGATCAACGGACAGCCTCTGAAAATAACTGAAATCCCGAAGGATGCAAAAATCACAGGACCCATTAGACCTCATATCAAACTCACCTCCTTGAACCTGGAGAAAATACACCAAATCCAAGATGATATAATCCAACAACATCCTGTGGACCTAGAACAAAGTGACGTCACGAACCAAGCACTCTTTCATACGACAATACCCTTTTACGGAGCACTCTGCGGCGCGATTGTCCTAGCCGTTGTAATCGCTGTTCATCGGCACAAGTCTTGCAACATAACCCTGGAAAAGAAGCCACGCGAAGAAACCTCAAAATTTCACCCGTACGAGAGTCCAGAAGAACCCCAGAAGAAGGACCGAATTCCGGCAACATTTGCCCTCAAGATTATCAAATAG
Protein
MYIEAECPKYNRYYLCEENINHQPRDDPDCIHDLIYNQAMNTSCQPTSVSFTKEAMEQLDDKHYVLIFPETTKIELHCQRLEYSTLQGSYLVTIPQNCKLRTGRLTLANNNDQINGQPLKITEIPKDAKITGPIRPHIKLTSLNLEKIHQIQDDIIQQHPVDLEQSDVTNQALFHTTIPFYGALCGAIVLAVVIAVHRHKSCNITLEKKPREETSKFHPYESPEEPQKKDRIPATFALKIIK

Summary

Pfam
PF12259   Baculo_F
Interpro
IPR022048   Envelope_fusion-like       

Ontologies

Topology

Length:
242
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.05995
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12869
outside
1  -  173
TMhelix
174  -  196
inside
197  -  242
 
 

Population Genetic Test Statistics

Pi
12.549085
Theta
16.904933
Tajima's D
-0.778532
CLR
1.554821
CSRT
0.180340982950852
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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