Gene

KWMTBOMO13442

Pre Gene Modal

BGIBMGA010863

Annotation

PREDICTED:_uncharacterized_protein_LOC106714732_[Papilio_machaon]

Location

Bomo_Chr22(+):17269002-17270556      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.558 Mitochondrial   Reliability : 1.299 Nuclear   Reliability : 1.709

CDS

ATGGTTTCCATAAGGCCCAGAGACACAGTGAACCATGAAATGGCTACCGGTGAAATTGAGGTCACCATAATAAAGTTAAAAGTTTTAAATCCATCAGAAAAAGTAGCATTCAACTTAAGAAACTATCAGAAACCAAAAGAACAATTGAGAATGCAACATCGATACATTGCTTTAAGATTTCCCGAGATGCAAAATAATTTAAGAACTAGATCACAGATGCTGCATAAGATGCGGAGATTTCTAGTGGAAAATTATGGGTTTATCGAAGTTGAGACTCCGACACTTTTCTGCAGGACACCAGGTGGTGCTAGAGAATTTGTTGTCCCCACTCGTCATAAAGGATTGTTCTATTCTTTAGTCCAAAGTCCTCAACAATTCAAACAAATGCTTATGTCTGGTGGAATAGACCGGTATTTCCAAGTAGCCAGGTGCTACAGAGACGAGACCACTCGTCCAGACCGTCAACCAGAATTTACTCAGTTGGATATTGAACTATCTTTTACCACTCTAGAAGGAGTTCTAACATTGATTGAAGAGATGCTATATGATACTTTTACGAAACCATTACCAAGACCTCCATTTAATAGAATTACATATAAAGAAGCACTGGAAAATTATGGAAGTGATAAACCAAATTTACTGTATGATTTGAAATTTATAAACATCAAACATTTATTTGACAAAAAAGAAAATGACAACTTTGGTGCTTTCCTGCTGCCTTACCCCAGTGAGATGGGGAAGCTTACCACCAAATATAAAGAGAAAGTAAAGGATATAGCAAAAAAATATAATGCAAAGGTTGTGTTTAATGAAAATATATCAAAGGAATATACAAGTGATCTACAAGAGAGAATACAAGATGCCATTGGTCAGAATCGTGCTGCAATTATATCTATAAGTGAAGACACCGAAAATGCCTGCCTATGTTTAGGAGAAATTAAAGATATGATAATATCAGTATTGAAATCTAAGGAGCTGCTAAAAGTTAATGACAATGTTGCACCTCTGTGGGTGATCGACTTCCCGTTATTTGTGAAAGGGGATGATGGACTTCAACCATGCCATCATCCCTTTACAGCGCCTCATCCGGATGACCTACATTTATTAGAAACGGAGCCATTGAAAGTTCGGTCATTAGCATATGATTTAGTGATGAATGGTAATGAAATAGGAGGTGGTTCAGTCCGAATACACAGTCCGCATTTACAAGTTAAAATTATGAAGATGTTGAACATAGATCCAGAGAAATTGAGGCATTTTGTGAATGCATTAAGTAGTGGCTGTCCTCCTCATGCCGGCATTGCTCTTGGTATTGACAGGCTAATGGCAATTGTCTGTGATGCAGAGTCTATAAGAGACGTGATTGCATTCCCCAAGTCTCATGATGGCCGTGACCCTCTGTCAGGTGCACCTAATGTTTTATCACATAGTGATAGAAATTATTATCATTTAAATCATATTAAATGA

Protein

MVSIRPRDTVNHEMATGEIEVTIIKLKVLNPSEKVAFNLRNYQKPKEQLRMQHRYIALRFPEMQNNLRTRSQMLHKMRRFLVENYGFIEVETPTLFCRTPGGAREFVVPTRHKGLFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDETTRPDRQPEFTQLDIELSFTTLEGVLTLIEEMLYDTFTKPLPRPPFNRITYKEALENYGSDKPNLLYDLKFINIKHLFDKKENDNFGAFLLPYPSEMGKLTTKYKEKVKDIAKKYNAKVVFNENISKEYTSDLQERIQDAIGQNRAAIISISEDTENACLCLGEIKDMIISVLKSKELLKVNDNVAPLWVIDFPLFVKGDDGLQPCHHPFTAPHPDDLHLLETEPLKVRSLAYDLVMNGNEIGGGSVRIHSPHLQVKIMKMLNIDPEKLRHFVNALSSGCPPHAGIALGIDRLMAIVCDAESIRDVIAFPKSHDGRDPLSGAPNVLSHSDRNYYHLNHIK

Uniprot

H9JMW0   H9JMW1   A0A2A4JII1   A0A2W1BQF6   A0A194R149   A0A0L7KUU8   + More
A0A212EIN8   A0A2H1X3S0   A0A194PXJ4   A0A0C9QZB7   D6WJB0   A0A0C9QGP4   A0A1W4WKH8   A0A1Y1KT12   A0A2J7QBJ1   A0A0V0GC92   A0A2J7QBJ9   A0A2J7QBJ6   E9J836   F4WWX4   E0VEP3   A0A0P5Z8U7   A0A151WRY0   A0A0P5CKQ2   A0A195F9L1   N6URF1   A0A1B6GND1   T1I6U6   A0A0A1X7W5   A0A0A1WV06   A0A0P6DA08   A0A0P5UTX5   A0A1L8DHE5   A0A0P5TW60   A0A151ITX3   A0A158NCD6   A0A195BX70   A0A0P6CI25   A0A0N8DAR9   B4P990   A0A3L8DGI4   A0A0N7ZP02   A0A1B6C2E3   A0A034WA29   A0A034W6E3   A0A336MVX5   A0A0A9X537   A0A146L606   B4MYY1   A0A0K8UG60   A0A1B6CB86   A0A336MZ96   A0A0K8VLE9   A0A182F110   E2A1R8   A0A336L9J0   A0A336MUF4   A0A3B0JPH7   A0A336LCG8   A0A1A9VIC3   B3NNL7   Q9VJH2   A0A067QXV0   W5JBB0   A0A0J9R3K6   A0A0K8RH38   B4G8P3   A0A0P5PJR4   A0A0L8G6X6   A0A0R3NX97   A0A3Q0IWP3   A0A1B0A4Q8   A0A131Y309   A0A3S1AX10   A0A151IGC6   A0A0R3NS00   A0A1A9XVX5   Q29MV1   A0A0R3NXK5   A0A1B0AP04   K7J0K8   A0A0L0BV39   Q7Q3E7   A0A182IEL3   A0A1S4GX39   B3MK45   W8B520   A0A1L8DFU7   A0A154PNX3   A0A2T7NMM3   A0A182WTH7   W8BSJ7   A0A1A9W5F1   A0A1W4VJV6   A0A0Q9WAC6   A0A1W4VXD4   A0A1W4VK27   A0A182SH46   B4KJR2   A0A2R5LCB7  

Pubmed

19121390    28756777    26354079    26227816    22118469    18362917    + More
19820115    28004739    21282665    21719571    20566863    23537049    25830018    21347285    17994087    17550304    30249741    25348373    25401762    26823975    20798317    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    20920257    23761445    22936249    15632085    23185243    20075255    26108605    12364791    18057021    24495485   

EMBL

BABH01029075    BABH01029076    BABH01029070    BABH01029071    NWSH01001352    PCG71576.1    + More
KZ149981    PZC75805.1    KQ460883    KPJ11239.1    JTDY01005408    KOB67042.1    AGBW02014600    OWR41357.1    ODYU01013276    SOQ59983.1    KQ459586    KPI98047.1    GBYB01006062    JAG75829.1    KQ971343    EFA03147.2    GBYB01013753    JAG83520.1    GEZM01078227    JAV62825.1    NEVH01016296    PNF25954.1    GECL01001117    JAP05007.1    PNF25955.1    PNF25957.1    GL768788    EFZ11007.1    GL888417    EGI61217.1    DS235093    EEB11849.1    GDIP01047060    JAM56655.1    KQ982796    KYQ50616.1    GDIP01168733    JAJ54669.1    KQ981727    KYN37066.1    APGK01003817    APGK01024678    KB740558    KB735439    ENN80364.1    ENN83366.1    GECZ01005832    JAS63937.1    ACPB03005117    GBXI01007502    JAD06790.1    GBXI01011403    JAD02889.1    GDIQ01083199    JAN11538.1    GDIP01110242    JAL93472.1    GFDF01008205    JAV05879.1    GDIP01138688    JAL65026.1    KQ981004    KYN10393.1    ADTU01011819    KQ976396    KYM92890.1    GDIP01014665    JAM89050.1    GDIP01052095    JAM51620.1    CM000158    EDW90219.2    QOIP01000008    RLU19550.1    GDIP01226721    JAI96680.1    GEDC01029607    JAS07691.1    GAKP01007800    JAC51152.1    GAKP01007801    JAC51151.1    UFQS01002655    UFQT01002655    SSX14469.1    SSX33875.1    GBHO01031414    JAG12190.1    GDHC01014748    GDHC01001351    JAQ03881.1    JAQ17278.1    CH963913    EDW77320.2    GDHF01027024    JAI25290.1    GEDC01026550    JAS10748.1    UFQS01002753    UFQT01002753    SSX14616.1    SSX34013.1    GDHF01012939    JAI39375.1    GL435766    EFN72741.1    SSX14468.1    SSX33874.1    SSX14615.1    SSX34012.1    OUUW01000006    SPP82262.1    SSX14467.1    SSX33873.1    CH954179    EDV56668.2    AE014134    AY119180    AAF53577.3    AAM51040.1    AGB93054.1    AGB93055.1    KK853129    KDR10978.1    ADMH02001728    ETN61281.1    CM002910    KMY90615.1    KMY90616.1    GADI01003353    JAA70455.1    CH479180    EDW28723.1    GDIQ01148926    JAL02800.1    KQ423493    KOF72786.1    CH379060    KRT03983.1    KRT03984.1    GEFM01003390    JAP72406.1    RQTK01001394    RUS70496.1    KQ977728    KYN00262.1    KRT03982.1    EAL33592.3    KRT03981.1    JXJN01001096    JRES01001418    KNC23109.1    AAAB01008964    EAA12212.3    APCN01005209    CH902620    EDV31463.2    KPU73419.1    GAMC01014367    JAB92188.1    GFDF01008773    JAV05311.1    KQ435007    KZC13581.1    PZQS01000011    PVD22419.1    GAMC01014366    JAB92189.1    CH940649    KRF81673.1    CH933807    EDW11507.2    GGLE01002980    MBY07106.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000007151    UP000053268    + More
UP000007266    UP000192223    UP000235965    UP000007755    UP000009046    UP000075809    UP000078541    UP000019118    UP000015103    UP000078492    UP000005205    UP000078540    UP000002282    UP000279307    UP000007798    UP000069272    UP000000311    UP000268350    UP000078200    UP000008711    UP000000803    UP000027135    UP000000673    UP000008744    UP000053454    UP000001819    UP000079169    UP000092445    UP000271974    UP000078542    UP000092443    UP000092460    UP000002358    UP000037069    UP000007062    UP000075840    UP000007801    UP000076502    UP000245119    UP000076407    UP000091820    UP000192221    UP000008792    UP000075901    UP000009192   

PRIDE

H9JMW0    H9JMW1    Q9VJH2   

Pfam

PF00152   tRNA-synt_2        + More
PF01336   tRNA_anti-codon
PF00076   RRM_1
PF02938   GAD
PF05891   Methyltransf_PK

Interpro

IPR004364   aa-tRNA-synt_II        + More
IPR002312   Asp/Asn-tRNA-synth_IIb       
IPR006195   aa-tRNA-synth_II       
IPR004115   GAD-like_sf       
IPR004524   Asp-tRNA-ligase_1       
IPR012340   NA-bd_OB-fold       
IPR004365   NA-bd_OB_tRNA       
IPR018149   Lys-tRNA-synth_II_C       
IPR035979   RBD_domain_sf       
IPR000504   RRM_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR006535   HnRNP_R/Q_splicing_fac       
IPR029351   GAD_dom       
IPR008576   MeTrfase_NTM1       
IPR029063   SAM-dependent_MTases       

SUPFAM

SSF50249   SSF50249        + More
SSF54928   SSF54928       
SSF55261   SSF55261       
SSF53335   SSF53335       

Gene 3D

3.30.1360.30     3.30.70.330    

ProteinModelPortal

H9JMW0   H9JMW1   A0A2A4JII1   A0A2W1BQF6   A0A194R149   A0A0L7KUU8   + More
A0A212EIN8   A0A2H1X3S0   A0A194PXJ4   A0A0C9QZB7   D6WJB0   A0A0C9QGP4   A0A1W4WKH8   A0A1Y1KT12   A0A2J7QBJ1   A0A0V0GC92   A0A2J7QBJ9   A0A2J7QBJ6   E9J836   F4WWX4   E0VEP3   A0A0P5Z8U7   A0A151WRY0   A0A0P5CKQ2   A0A195F9L1   N6URF1   A0A1B6GND1   T1I6U6   A0A0A1X7W5   A0A0A1WV06   A0A0P6DA08   A0A0P5UTX5   A0A1L8DHE5   A0A0P5TW60   A0A151ITX3   A0A158NCD6   A0A195BX70   A0A0P6CI25   A0A0N8DAR9   B4P990   A0A3L8DGI4   A0A0N7ZP02   A0A1B6C2E3   A0A034WA29   A0A034W6E3   A0A336MVX5   A0A0A9X537   A0A146L606   B4MYY1   A0A0K8UG60   A0A1B6CB86   A0A336MZ96   A0A0K8VLE9   A0A182F110   E2A1R8   A0A336L9J0   A0A336MUF4   A0A3B0JPH7   A0A336LCG8   A0A1A9VIC3   B3NNL7   Q9VJH2   A0A067QXV0   W5JBB0   A0A0J9R3K6   A0A0K8RH38   B4G8P3   A0A0P5PJR4   A0A0L8G6X6   A0A0R3NX97   A0A3Q0IWP3   A0A1B0A4Q8   A0A131Y309   A0A3S1AX10   A0A151IGC6   A0A0R3NS00   A0A1A9XVX5   Q29MV1   A0A0R3NXK5   A0A1B0AP04   K7J0K8   A0A0L0BV39   Q7Q3E7   A0A182IEL3   A0A1S4GX39   B3MK45   W8B520   A0A1L8DFU7   A0A154PNX3   A0A2T7NMM3   A0A182WTH7   W8BSJ7   A0A1A9W5F1   A0A1W4VJV6   A0A0Q9WAC6   A0A1W4VXD4   A0A1W4VK27   A0A182SH46   B4KJR2   A0A2R5LCB7  

PDB

4AH6     E-value=1.94761e-110,     Score=1021

KEGG

101740772    K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] | (RefSeq) aspartate--tRNA ligase, mitochondrial

GO

GO:0004812   GO:0005524   GO:0005737   GO:0006418   GO:0003676   GO:0004824   GO:0006430   GO:0003723   GO:0004815   GO:0005739   GO:0006422   GO:0016874   GO:0000166   GO:0048869   GO:0016491   GO:0015930  

PANTHER

PTHR22594:SF5  

Length:

488

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01888

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00734

outside

1  -  488

 

 

Pi

5.939175

Theta

7.943798

Tajima's D

-0.728036

CLR

15.646192

CSRT

0.19794010299485

Interpretation

Uncertain