SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13416
Pre Gene Modal
BGIBMGA010901
Annotation
PREDICTED:_netrin_receptor_UNC5C-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.209
 

Sequence

CDS
ATGGAAGTGAACTTTTGGGTTTGCCTTTTAGTAGTTCATACTCAATTTTCGTTTTATGGGAAAGGACAGAAATTGAAAAATCAAAATCATCACGACGCAAAAACAGATGATCAAGATGAATTATCACCGGTTCATCATCAACCCCATATTAAGGATTACTTCCTGCCTCCGGTCTTCAATCACGATGACGAGGAGGAAGACGAAGATGAAGGTTACGCTGATTACGATTACGATAAAGGAACGAACTACAAGGATTCCCCTGATTTAGTTACAGTTCCCAGTGACACACAAGAAACCGAAGATAAAATACCATTACACACGACGAAAGACAATCTACCTGTATTTCTTTTAGAGCCGGAGAATACGTATGTGGTTAAAAATAAACCCGCTATTTTGAAATGTCGCGCTGCTAATGCTTTGGAGGTATACTTTAAATGCAATGGAATCAAAACACAAGGTGCGAACTTTGAATTCGTTGACCCACAAACCGGGGTGCGGATAATTGAAGGTGAACAATCGGTAACTAGAGAGAACATTGAAGAATACTTTGGTGGTGATAAGTACCAATGTTCCTGCTTCGCTTGGACCAGTCGAGGACAGATTAGAAGTCAGCCTGCTACAATTGAAATCGCATACATAAAGAAGCAATTCGCTGTAGCGCCGCAATCGCAACTGGTCAAACAGTACACATCAGTCAATTTCCGATGCGAGCCTCCACCAGCGGCGCCCTTCGCCCAGCTGTACTGGTTGAAGAATGGTGCTCCCGTTGTTATTGATGATAACGTTCAGGTTTCAACCGACGGAAATCTTATCATTAAGCAAGCTAATCTGCTGGACATGGCTAACTACACATGTGTTGCGGAAAACTTAGCCGGGAAGCGCATGTCAGAACCGGCTCTGCTGTCAGTATTCGTTAACGGTGGTTGGAGTACATGGTCAGCGTGGGTGGACTGTTGTCCAACAAGAGAAGGTCGAACGGGCAGAAAGAGAGAGAGAACTTGCACGGCACCGCGACCTCTAAACGGTGGACAGCCTTGCGTTGGCAACAATCTACAGAAGACTCAGGATTGTGTGGAGTGTGACATAGATTTGTATCTCGATAATATCGACGAGCTGGCTGATGAATCACCGAACATAGTTTTGGGACGTTGGTCGCAATGGTCAGACTGGTCGCGATGTGATTCCGACTGCCTTCAAACTAGAAGACGAAAGTGTCTCACGAGCTCGTGTCTGGGGAAAGACTACCAAGTCGCCCAGTGTCCTCTCTGTGTGCGCACGTCGAAATCTGAAAGAATTAATGACGGTACTCCGTATTGGCCCCTTTTCGTAGCGTTATCAATAGCCTCCCTCGTGTTTATAGTCGTAGTAATTCTCGGAATAAAATACATGAAGTTCAAGACGACTGAGACATCGCCTTACGCTAAACCGCCCACAGGTGGCAATTATTTCGGAAACGTTATAAAAAGGACTTTGACTAATCAACCAGACCTCACTATTCACGAGGAGTTCCACACGATAGATTCTTCACGGCTCAGGCACGCTAACATCATTACTAACGCACGGCATGAGCATTTGTACGAAGTGCCACAGCTAGCTAATAGTTACATAGCACCCATAGACCACGAGGTAAGGAACGACCGGATCGCTTGCAACAAGGACGCCTCTGAGTCAGACCGCTCTGACTCAAGCTGCTTTTTGAGCTCCGGTTCATCGTACAGCCACAGCGTAGAAATATCGCCTTCATTAAAAAACAATGCATCGTTAAACTCGAACTACGCAACGAATCTAGATACTTCCAAATCCAAGATGGTGTCGAGCGACGGCGACTGGTTAAATCTGGATAAAACCGGTGTTAGTCTGTTTGTTCCGGACGGCGTTGTTGATAAAGGAGAGGAATTGTTTTCTGTTGAAGTATCTGACGAGGAATGGAATAGGCCCATGCTTCAAGACGGCGAAATCCAATTGAGTCCGGTCATCAAATGCAGTCCTAAGAACTTTCACTTCCGTAAGGGCGTGGTCCTAACGTTTCCTCACTACGCATCGTTGAGGAACACCAGCTGGCTGCTATTCATCCTGCAGCGCCCTGATGATCTCCATACGAGGGAGTGGCGTAAAGTTTTGACTCTAGGCCAAGAGACTCCCGGCACGCCAATCTTCAGTCAAGTCGATCCTAACAAAGTGTACATCGTGGGCGAGTTCTTGAGCGATTTCGTCCTGGTGGGAAGAAGTTTTGCCGGTTCAGACGCCAAGAACCTAAAACTTGCCTTATTCATCTACGAAATGGACGAGAACTATCATCGTCTGAAACTGCACGTCTTCAACGATACGCCTCACTGTTTGAACGAGTGCTTCAATCTAGAACGGAGATTGGGCAGTAAGCTTCTGTGCGAACCGAAACCCTTCTATTTCCAGGAAAGCGGCTCAGATCTGAATAACGATGGTGGTATGTTGGTCGATCTTTCTCGTATATTCAGGGAGATGGGACGAATCGACTGTGCTACAGTTGTCGAGCGTAGATGCTTCTCGAATTAA
Protein
MEVNFWVCLLVVHTQFSFYGKGQKLKNQNHHDAKTDDQDELSPVHHQPHIKDYFLPPVFNHDDEEEDEDEGYADYDYDKGTNYKDSPDLVTVPSDTQETEDKIPLHTTKDNLPVFLLEPENTYVVKNKPAILKCRAANALEVYFKCNGIKTQGANFEFVDPQTGVRIIEGEQSVTRENIEEYFGGDKYQCSCFAWTSRGQIRSQPATIEIAYIKKQFAVAPQSQLVKQYTSVNFRCEPPPAAPFAQLYWLKNGAPVVIDDNVQVSTDGNLIIKQANLLDMANYTCVAENLAGKRMSEPALLSVFVNGGWSTWSAWVDCCPTREGRTGRKRERTCTAPRPLNGGQPCVGNNLQKTQDCVECDIDLYLDNIDELADESPNIVLGRWSQWSDWSRCDSDCLQTRRRKCLTSSCLGKDYQVAQCPLCVRTSKSERINDGTPYWPLFVALSIASLVFIVVVILGIKYMKFKTTETSPYAKPPTGGNYFGNVIKRTLTNQPDLTIHEEFHTIDSSRLRHANIITNARHEHLYEVPQLANSYIAPIDHEVRNDRIACNKDASESDRSDSSCFLSSGSSYSHSVEISPSLKNNASLNSNYATNLDTSKSKMVSSDGDWLNLDKTGVSLFVPDGVVDKGEELFSVEVSDEEWNRPMLQDGEIQLSPVIKCSPKNFHFRKGVVLTFPHYASLRNTSWLLFILQRPDDLHTREWRKVLTLGQETPGTPIFSQVDPNKVYIVGEFLSDFVLVGRSFAGSDAKNLKLALFIYEMDENYHRLKLHVFNDTPHCLNECFNLERRLGSKLLCEPKPFYFQESGSDLNNDGGMLVDLSRIFREMGRIDCATVVERRCFSN

Summary

Similarity
Belongs to the serpin family.
EMBL
NWSH01004342    PCG65211.1    KZ150134    PZC73003.1    KQ459586    KPI98031.1    + More
KQ460874    KPJ11666.1    RSAL01000124    RVE46623.1    AGBW02011206    OWR47055.1    AGBW02012107    OWR45646.1    KZ149907    PZC78254.1    NWSH01001062    PCG72846.1    PCG72847.1    KQ459324    KPJ01644.1    GEZM01086422    JAV59460.1    GEBQ01016935    JAT23042.1    GEBQ01024488    JAT15489.1    KQ977642    KYN01011.1    KQ434870    KZC09610.1    ABLF02041018    GL887491    EGI71002.1    KQ982585    KYQ54236.1    KQ414585    KOC70552.1    ADTU01025884    ADTU01025885    KQ980295    KYN16887.1    KQ976625    KYM78959.1    QOIP01000005    RLU23184.1    GAMC01015248    JAB91307.1    GAMC01015247    JAB91308.1    KK107847    EZA47459.1    GAKP01009178    GAKP01009177    GAKP01009176    JAC49774.1    GANO01001690    JAB58181.1    GDHF01025673    GDHF01021499    JAI26641.1    JAI30815.1    GBXI01007470    JAD06822.1    GDIP01188765    JAJ34637.1    CH933808    EDW08378.1    KB203683    ESO83456.1    CH940667    EDW57244.1    KRG04084.1    CM000071    EAL26245.2    OUUW01000001    SPP75100.1    JRES01000644    KNC29659.1    CH479183    EDW35945.1    EZA47457.1    KRT02937.1    EGI71006.1    CH963719    EDW72107.1    KYN16881.1    KYM78963.1    RLU23185.1    KQ981979    KYN31539.1    GL441572    EFN64605.1    ADTU01018638    ADTU01018639    HADY01007659    SBP46144.1    KYQ54241.1    KYN01006.1    HADZ01008765    SBP72706.1    HAEJ01014574    SBS55031.1    HAEH01003003    HAEI01004676    SBR89826.1    GCES01020152    JAR66171.1    KZC09608.1    KQ414755    KOC61811.1   
Pfam
PF17217   UPA        + More
PF00791   ZU5
PF07679   I-set
PF00531   Death
PF00079   Serpin
PF00090   TSP_1
Interpro
IPR000488   Death_domain        + More
IPR007110   Ig-like_dom       
IPR003598   Ig_sub2       
IPR000906   ZU5_dom       
IPR036179   Ig-like_dom_sf       
IPR036383   TSP1_rpt_sf       
IPR033772   UPA       
IPR013098   Ig_I-set       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR011029   DEATH-like_dom_sf       
IPR000884   TSP1_rpt       
IPR037936   UNC5       
IPR042185   Serpin_sf_2       
IPR042178   Serpin_sf_1       
IPR023796   Serpin_dom       
IPR036186   Serpin_sf       
SUPFAM
SSF82895   SSF82895        + More
SSF47986   SSF47986       
SSF48726   SSF48726       
SSF56574   SSF56574       
PDB
5FTT     E-value=1.8314e-48,     Score=489

Ontologies

Topology

Length:
843
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.5622399999999
Exp number, first 60 AAs:
0.1434
Total prob of N-in:
0.05076
outside
1  -  437
TMhelix
438  -  460
inside
461  -  843
 
 

Population Genetic Test Statistics

Pi
23.852279
Theta
24.995141
Tajima's D
0.082378
CLR
0.567192
CSRT
0.39838008099595
Interpretation
Uncertain
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