SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13413
Pre Gene Modal
BGIBMGA010855
Annotation
Dual_specificity_protein_phosphatase_18_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.859
 

Sequence

CDS
ATGAAAGTTTTAACTGTTGGAGACAAAGTTGCTAGTGTCGGTCGAGAGAATGAGCCCACCGTTGTGGTCGACACGCAAAAGTTAATTAGAGAAGAATTGAACAGGGGCTGTCCATTGGGCGTGTCGAGGGTCACGAATCTAGTCTACGTGTGTGGAGCTCACGCTCTACCTGGAGCCGTCAGGGTTTTGCATCCTGGATTGATCGTCAGCGCGGCGCCAGAACTGCCTCCACCGCCCGAAGATTACGTACCGAGGCATTTCGTACCCCTGTTGGACACTCCGAACTCAGATATGCTCCCCTATATGGATAGGGTTGCTGACCTTATTAATGAGGTGGTCACAAACGGAGGGGTGGTGTTGGTTCATTGCGTCGCCGGAGTGTCCAGATCAGTGACACTCTGTCTGGCTTACTTGGTCAAATGGCAGAAGATGACCCTACGTGATGCCTACCACTACTTGAAGATAAGACGACCACAAATTCGACCGAACACGGGTTTCTTCAAGCAGCTCATCAAATTCGAAGAAAGACTGTTCAGCGAAGCAACAGTCAAGATGGTGTATTGCGAGGCCATCGACAAAGAGATCCCTGATGTATACGAGCCTGATTACAGCGGAATGACATGGTTCAGGCAACGATACGGACCTATCGAAAAATGCTGA
Protein
MKVLTVGDKVASVGRENEPTVVVDTQKLIREELNRGCPLGVSRVTNLVYVCGAHALPGAVRVLHPGLIVSAAPELPPPPEDYVPRHFVPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYHYLKIRRPQIRPNTGFFKQLIKFEERLFSEATVKMVYCEAIDKEIPDVYEPDYSGMTWFRQRYGPIEKC

Summary

Similarity
Belongs to the protein-tyrosine phosphatase family. Non-receptor class dual specificity subfamily.
EMBL
BABH01029151    JTDY01005488    KOB66952.1    ODYU01012980    SOQ59558.1    NWSH01002601    + More
PCG67881.1    KQ460874    KPJ11665.1    AGBW02011206    OWR47057.1    KQ459586    KPI98030.1    GAMC01013193    JAB93362.1    ATLV01023568    KE525344    KFB49311.1    AAAB01008960    EAA11667.3    APCN01002312    AXCM01000123    GDHF01017017    JAI35297.1    GDHF01016048    JAI36266.1    AXCN02000879    CH916369    EDV93202.1    GAKP01013433    GAKP01013432    JAC45519.1    OUUW01000005    SPP80948.1    CH940652    EDW59258.1    KA646472    AFP61101.1    GGFL01016191    MBW80369.1    GBXI01009913    GBXI01001297    JAD04379.1    JAD12995.1    JRES01001347    KNC23498.1    FJ821034    ACN94752.1    CH964272    EDW83924.1    GFDF01007035    JAV07049.1    ADMH02002146    ETN58284.1    LNIX01000009    OXA50374.1    GFDF01000992    JAV13092.1    CH479186    EDW39309.1    CM000070    EAL26775.2    CH933806    EDW14338.1    CVRI01000067    CRL06608.1    AE014297    BT032968    AAF57003.2    ACD99532.1    GAMD01001011    JAB00580.1    CM000364    EDX14965.1    CH480819    EDW53470.1    CH954182    EDV53119.1    CM000160    EDW99056.2    CH477297    EAT44375.1    GEZM01088611    JAV58067.1    AJWK01013496    CP012526    ALC46256.1    AFFK01018426    GBRD01008967    GDHC01019428    JAG56854.1    JAP99200.1    JH432105    AJVK01033253    CCAG010022183    EZ423554    ADD19830.1    ABJB010256539    DS626813    EEC01034.1    EAAA01000286    GEFM01003177    JAP72619.1    GANP01006922    JAB77546.1    JXJN01019253    JXJN01019254    NEDP02004373    OWF45899.1   
Pfam
PF00782   DSPc
Interpro
IPR020422   TYR_PHOSPHATASE_DUAL_dom        + More
IPR000340   Dual-sp_phosphatase_cat-dom       
IPR000387   TYR_PHOSPHATASE_dom       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR016130   Tyr_Pase_AS       
IPR003595   Tyr_Pase_cat       
IPR020417   Atypical_DUSP       
IPR020420   Atypical_DUSP_famB       
SUPFAM
SSF52799   SSF52799       
Gene 3D
PDB
2WGP     E-value=3.97817e-27,     Score=299

Ontologies

Topology

Length:
219
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.79423
Exp number, first 60 AAs:
0.48252
Total prob of N-in:
0.13574
outside
1  -  219
 
 

Population Genetic Test Statistics

Pi
21.083867
Theta
21.374597
Tajima's D
0.003626
CLR
0.194126
CSRT
0.373881305934703
Interpretation
Uncertain
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