SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13412
Pre Gene Modal
BGIBMGA010854
Annotation
Cytochrome_P450_[Operophtera_brumata]
Location in the cell
PlasmaMembrane   Reliability : 1.947
 

Sequence

CDS
ATGTTGCTCTTAGCTTTGTTGTTAATATTTAGTATTGTAATTTATTTATACACGACACGAAATCATAATTACTGGGCGAAGAGGGGAGTACGTCATGATCCACCGGTACCGTTCTTCGGAAACCATTTTCGCAACGTCTTCGGTCTTAAAAGTATAATTGAATTGTCGGTTGAGCTTTACAATAAGTATCCAAATGAAAAAGTCGTGGGCTACTACAGAGGCACCGAGCCGGAACTCATAGTGAGAGACTTAGATATCGCTAAAAATATATTAATCGGTGATTTCGTGTATTTCCACCATCGTGGCTTGGGAAGGAATACAGATCTAGAACCCTTACTGCGGAACTTATTTCACGTCGATGGAGATGCATGGAAACTATTGCGAAAGAGATTGACGCCTGCTTTCACGACCGCTAAACTTAAAGCCATGTTCCCCCTGGTCATTAACTGCGCCGAGAAGATGAAGAGCGTAGCCGGTGAGTACGCTGGACGAGGAGGAGAGTGTGACGTCAGGGAGCTGATGGCGCGGTTCTCTACAGAGTTCATAGGCGCTTGTGGATTTGGAATCCAAATGGATACCATCAACAATGAATGTTCGCTGTTTAGAGAATTAGGAAGATTAATTTTCACGCGACAGGGTTTGAGTTTAGTAGCTATTGGCCTGTGGGATCTGTTACCGGAGCTGAGGAAATACTTGCGCCTGCCAAGTAGCTCGGTTGAAGCCACTATTACGGAGATTTATGAAAAAATTCGGGATCAGAGGAACGGGAAGCCTTGCGGTAGAAACGACTTCGTTGACCTGCTTCTGGAATTGAAACAGAAAGGGGTCATTGAAGGAGAATCTATAGACAGATTCAACGTTGACGGCACCCCTGTTCAGGTGCAACTTGAAATGGATACTAAATGTATTGTGGCTCAGATGTTTGTGTTTTTTGCGGCTGGATTTGAGACTTCTTCGTCGGCGACCAGCTACACTTTACACCAACTCGCCTTCCACCAGGAAATACAAAAAGAAATTCAATGCGAAATAGACGAGGTATTATCGAGGCATGATAACAAATTGTGTTATGATGCCATATTGGAGATGCCATTGTTAACAATGGCATTTAAAGAGGCGTTGAGAATGTTCCCGTCCCTTGGAAACTTGCATAGAGTTTGCACAAGATCATATACTATACCAGAATTAGGTATTACCATAGATCCTGGCGTGAGAATCATAATTCCCGCGCAAGCTATACAGAACGACGCGAAATACTTCGACGATCCCAGCGAATTTCGTCCGAAGCGGTTCGCTAAAGATTCGGAGATTAAAAAGTTTTCGTTTTTACCATTCGGAGCTGGACCTAGGAACTGTATAGGCGCTCGTCTAGGTGAAATGCAGTCATTGGCGGGACTGGCGGCCATCTTGCACAAATTCTCAGTGGAACCAGCTCCCAGCACAGTTCGTAAACTAAGAGTCAAGCACACGCAAAATGTAGTCCAAGGAGTCGAAGGAGGTCTACCGTTGTTGATTAAAGAAAGAAAGTGA
Protein
MLLLALLLIFSIVIYLYTTRNHNYWAKRGVRHDPPVPFFGNHFRNVFGLKSIIELSVELYNKYPNEKVVGYYRGTEPELIVRDLDIAKNILIGDFVYFHHRGLGRNTDLEPLLRNLFHVDGDAWKLLRKRLTPAFTTAKLKAMFPLVINCAEKMKSVAGEYAGRGGECDVRELMARFSTEFIGACGFGIQMDTINNECSLFRELGRLIFTRQGLSLVAIGLWDLLPELRKYLRLPSSSVEATITEIYEKIRDQRNGKPCGRNDFVDLLLELKQKGVIEGESIDRFNVDGTPVQVQLEMDTKCIVAQMFVFFAAGFETSSSATSYTLHQLAFHQEIQKEIQCEIDEVLSRHDNKLCYDAILEMPLLTMAFKEALRMFPSLGNLHRVCTRSYTIPELGITIDPGVRIIIPAQAIQNDAKYFDDPSEFRPKRFAKDSEIKKFSFLPFGAGPRNCIGARLGEMQSLAGLAAILHKFSVEPAPSTVRKLRVKHTQNVVQGVEGGLPLLIKERK

Summary

Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
EMBL
AB436836    BAM73791.1    BABH01029151    BABH01029152    JTDY01007935    KOB64846.1    + More
JTDY01005488    KOB66951.1    KQ460323    KPJ15944.1    KQ459586    KPI98029.1    GU731535    ADE05585.1    NWSH01007381    PCG62988.1    NWSH01004862    PCG64640.1    KX443426    ASO98001.1    MF684342    ASX93976.1    KF853201    AHH92939.1    ODYU01012980    SOQ59557.1    KC789748    AGO62003.1    JX310074    AFP20585.1    PCG62987.1    KY212046    ARA91610.1    KM016745    AID54897.1    KY212047    ARA91611.1    GDQN01002269    JAT88785.1    GDQN01011467    JAT79587.1    KJ645912    AIJ00769.1    KP715469    AKR18891.1    AGBW02011206    OWR47058.1    GCVX01000071    JAI18159.1    GDQN01005707    GDQN01002158    JAT85347.1    JAT88896.1    GCVX01000070    JAI18160.1    AK289286    BAM73813.1    KJ645915    AIJ00772.1    KJ645916    AIJ00773.1    KQ459606    KPI91745.1    GDQN01005420    JAT85634.1    DQ993198    ABJ97708.1    KZ150094    PZC73629.1    AK289287    BAM73814.1    KJ645913    AIJ00770.1    KM016734    AID54886.1    KF701130    AHW57300.1    AK343203    BAM73889.1    KM016733    AID54885.1    EF017798    ABK27873.1    JX310081    AFP20592.1    KX827419    APL97605.1    GDQN01011078    GDQN01009598    JAT79976.1    JAT81456.1    KQ460545    KPJ14075.1    MH644187    AZP54635.1    JN176570    AET11927.1    KC789747    AGO62002.1    AB498806    BAI47531.1    BABH01033060    PZC73628.1    EF415299    ABN71370.1    KJ645914    AIJ00771.1    GDQN01009559    JAT81495.1    GDQN01007873    GDQN01001117    JAT83181.1    JAT89937.1    KX443423    ASO97998.1    JF829002    AEL87782.1    KF701131    AHW57301.1    ODYU01003027    SOQ41282.1    NWSH01000968    PCG73362.1    KX443422    ASO97997.1    KX443424    ASO97999.1    KF701132    AHW57302.1    KPI91048.1    MG829855    AXJ21602.1    GDQN01005674    GDQN01003533    JAT85380.1    JAT87521.1    JTDY01008220    KOB64673.1    NWSH01000809    PCG74096.1    RSAL01000032    RVE51553.1    GCVX01000066    JAI18164.1    KQ460205    KPJ17095.1    KQ460473    KPJ14499.1    GU731534    ADE05584.1    JQ901385    AGB93713.1    NWSH01003644    PCG65996.1    KPJ14074.1    BABH01016132    BABH01016133    KPI91047.1    JX310080    AFP20591.1    LADJ01036943    KPJ21305.1    FJ795021    ACN88551.1    GDQN01011046    GDQN01002027    JAT80008.1    JAT89027.1    KPJ21304.1    KQ459620    KPJ20541.1    KX443425    ASO98000.1    AK289288    AK289289    BAM73815.1    BAM73816.1    EF570076    ABQ45551.1    GDQN01006843    JAT84211.1    GCVX01000065    JAI18165.1    JTDY01009584    KOB63273.1    KQ459591    KPI97045.1    RSAL01000123    RVE46645.1    GCVX01000047    JAI18183.1    KPI91049.1    KY212041    ARA91605.1    KF701190    AHW57360.1    MG697223    AVR93642.1    KOB64674.1    KPI91050.1    KZ149941    PZC76905.1   
Pfam
PF00067   p450        + More
PF15092   UPF0728
Interpro
IPR036396   Cyt_P450_sf        + More
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR002401   Cyt_P450_E_grp-I       
IPR027885   UPF0728       
IPR002402   Cyt_P450_E_grp-II       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6MJM     E-value=4.09232e-54,     Score=536

Ontologies

Topology

Length:
508
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
11.98209
Exp number, first 60 AAs:
11.85391
Total prob of N-in:
0.64066
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  19
outside
20  -  508
 
 

Population Genetic Test Statistics

Pi
26.836502
Theta
17.173355
Tajima's D
1.651488
CLR
0
CSRT
0.827558622068897
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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