Gene

KWMTBOMO13407

Pre Gene Modal

BGIBMGA010851

Annotation

Uncharacterized_protein_OBRU01_07690_[Operophtera_brumata]

Location

Bomo_Chr22(+):16223873-16226605      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.567

CDS

ATGGCTGCGCTTAGGGTGTTTAGCCGTAATCTTCCGTATTTGCGACAACAATTTGCAGCATTGTTAGGGAACACATCACCTTCGGTAAAGTTTATCTGCGTGGTCGTGGTTATAGGATATATATTATCATTTTCCGATGATGTCGTCAATGTACTCAGTGTCACTCCAGGGTATTTGCTGCCTCCTTCATTTCAACTATGGTCTACTTTCACGTTCTGGTTTCTCGAAATACATTTGTGGGAGGTGATCATCGATATTGTGACTGTGGGGCTGTGCGGGAAACTCATAGAACCACTGTGGGGACAGATGGAAATGATGAAGTTTTTCATACTGACCAACTTTGGTGTAGCGTTTTTGACTACGTTTTACTATTTAGTGATATTTGCGTGTACGGGTCAAACCTCGTATTTATTCGACATTCATGTACACGGGCTGGCAGGGTACCTGGCCGCAGTCAGTGTCGCTGTGAAGCAAATCATGCCAGATCATCTGCTGATTAAAACACCACTAGGTAAATTAACCAACAGGTCTTTACCACTACTGATCCTAATAGTGGCTATTATCCTGTGGGCTATTGGTGCCTTAGAAGGGACATATCCTTGCATGTGGGGCAGTGGGACGATTCTATCTTGGATATATCTAAGGTTCTGGCAAAGACACACCAATGGTACCAGGGGAGATATGGCAGACAACTTTAGTTTTGATAACTTCTTTCCAACAGTCCTGCAACCTGTAGTCCGAGCTATTGTAGGTCCACCGCATCGTTGTCTAGTGCGGCTTGGTCTCTGTTCACCTAGTCCACGTCGAGTGCACTTAGCACTTAGTCCCCGAGGTGTGACAATTTCTATGCCTGGAGTGGAACCACAAGATATGGAGAGGCGAAGACAAATTGCATTAAAAGCATTGAGTGAAAGACTATCCAAAACATCTGAGCAAACTCGTCAAAAGAACTTATCGACGAAAGTAAACATGGATGCTGTTAGGAAGATGCAGACATCACAAGTGATACCTCAATTCACGGAACCCGAAACAAGCAAAGGTATACAGGCGCCTCCCACGGAGGCGACCCTTGTGGATCTCGGACCAGACCCAACACCTCCAATCACCAAGCAATCATGA

Protein

MAALRVFSRNLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSFQLWSTFTFWFLEIHLWEVIIDIVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYLVIFACTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTPLGKLTNRSLPLLILIVAIILWAIGALEGTYPCMWGSGTILSWIYLRFWQRHTNGTRGDMADNFSFDNFFPTVLQPVVRAIVGPPHRCLVRLGLCSPSPRRVHLALSPRGVTISMPGVEPQDMERRRQIALKALSERLSKTSEQTRQKNLSTKVNMDAVRKMQTSQVIPQFTEPETSKGIQAPPTEATLVDLGPDPTPPITKQS

Uniprot

H9JMU8   A0A2H1VBE3   A0A0L7LJN5   A0A194RDM1   A0A194Q3N6   A0A212ES39   + More
A0A2J7RHU6   A0A2P8XJ93   A0A1W4XUI8   D6WZF9   A0A1B6KNC7   A0A0M8ZSD5   A0A0L7QWX2   A0A067RRC2   E2BNW4   K7ISP7   A0A1W4XK18   A0A088AD27   A0A1B6H8N4   A0A2A3EM74   A0A026WZC0   A0A1B6ETB8   E2AFT0   A0A151X5L9   A0A158NSV2   A0A195EXB8   A0A151I0K2   A0A195DPR0   F4WSJ6   A0A1B6D489   E9IPX5   A0A195CT02   A0A0J7L0K8   A0A0A9WFT4   A0A1Y1L4V0   N6UEU0   A0A0C9RWX6   A0A0P4W4P6   T1HHS6   Q0IFM8   A0A1S4F7R8   A0A0N8D8K4   A0A023EU16   A0A182GWA9   A0A0P5G1G5   A0A0N8CFY1   E0VAX0   E9GJT9   A0A0P5V1V8   A0A1Q3F6K1   A0A224XRE2   A0A0P5V2H8   A0A0K8TMY3   A0A1I8PM05   T1E1H4   W5J912   A0A2M4AEV8   A0A2M4AEA8   A0A2M4AEC5   A0A2M4BMH8   A0A2M4BMI1   A0A2M4BMK4   D3TQJ0   A0A182THV3   A0A182V8L5   A0A2M3ZGV5   A0A182VUT7   A0A182XIP2   A0A1S4H134   Q7QKG4   A0A182JH08   A0A182HG45   A0A1A9W5H8   A0A2M3Z3Z2   A0A182F5A5   A0A2M3Z410   A0A0P6I9E7   A0A0M3QU83   A0A182QAV9   B4KKX6   A0A0N8DL14   A0A182NEK7   A0A1I8MPI8   T1PJ24   B4M9K2   B0W242   B0X6D6   A0A084VPS1   A0A182M801   A0A182RGA2   A0A182K1L6   A0A0P5G6K1   A0A182YFZ1   Q29PD9   A0A0K8UWN0   B4GKK4   A0A0P5Y2B8   A0A3B0KBH3   A0A034VLR7   A0A1B0BN35  

Pubmed

19121390    26227816    26354079    22118469    29403074    18362917    + More
19820115    24845553    20798317    20075255    24508170    30249741    21347285    21719571    21282665    25401762    26823975    28004739    23537049    27129103    17510324    24945155    26483478    20566863    21292972    26369729    24330624    20920257    23761445    20353571    12364791    17994087    25315136    24438588    25244985    15632085    25348373   

EMBL

BABH01029173    ODYU01001647    SOQ38163.1    JTDY01000878    KOB75579.1    KQ460323    + More
KPJ15938.1    KQ459586    KPI98025.1    AGBW02012888    OWR44279.1    NEVH01003737    PNF40396.1    PYGN01001944    PSN32071.1    KQ971372    EFA10421.1    GEBQ01027046    JAT12931.1    KQ435878    KOX69987.1    KQ414706    KOC63066.1    KK852511    KDR22304.1    GL449511    EFN82556.1    AAZX01002898    GECU01036686    JAS71020.1    KZ288220    PBC32141.1    KK107054    QOIP01000004    EZA61415.1    RLU24008.1    GECZ01028806    JAS40963.1    GL439158    EFN67679.1    KQ982494    KYQ55701.1    ADTU01025191    KQ981923    KYN32925.1    KQ976619    KYM79129.1    KQ980653    KYN14836.1    GL888322    EGI62811.1    GEDC01016832    JAS20466.1    GL764659    EFZ17348.1    KQ977305    KYN03775.1    LBMM01001604    KMQ96029.1    GBHO01043045    GBHO01039887    GBHO01039884    GBHO01039880    GBHO01037834    GBHO01037830    GBHO01037829    GBHO01035866    GBHO01019446    GBHO01009894    GBHO01009291    GDHC01020381    JAG00559.1    JAG03717.1    JAG03720.1    JAG03724.1    JAG05770.1    JAG05774.1    JAG05775.1    JAG07738.1    JAG24158.1    JAG33710.1    JAG34313.1    JAP98247.1    GEZM01064570    JAV68712.1    APGK01029446    KB740735    KB630388    KB632136    ENN79126.1    ERL83585.1    ERL89063.1    GBYB01012366    JAG82133.1    GDKW01000280    JAI56315.1    ACPB03001010    CH477306    EAT44115.1    GDIP01058215    JAM45500.1    GAPW01001664    JAC11934.1    JXUM01092900    KQ564018    KXJ72928.1    GDIQ01247653    GDIP01067966    LRGB01001363    JAK04072.1    JAM35749.1    KZS12180.1    GDIP01135599    JAL68115.1    DS235019    EEB10526.1    GL732548    EFX80170.1    GDIP01105650    JAL98064.1    GFDL01011855    JAV23190.1    GFTR01005416    JAW11010.1    GDIP01105651    JAL98063.1    GDAI01002107    JAI15496.1    GALA01001664    JAA93188.1    ADMH02002093    ETN59289.1    GGFK01005847    MBW39168.1    GGFK01005804    MBW39125.1    GGFK01005816    MBW39137.1    GGFJ01005145    MBW54286.1    GGFJ01005146    MBW54287.1    GGFJ01005144    MBW54285.1    EZ423692    ADD19968.1    GGFM01007001    MBW27752.1    AAAB01008797    EAA03623.3    AXCP01008030    APCN01004115    GGFM01002417    MBW23168.1    GGFM01002437    MBW23188.1    GDIQ01007699    JAN87038.1    CP012523    ALC40213.1    AXCN02000851    CH933807    EDW11706.1    GDIP01023335    JAM80380.1    KA647913    AFP62542.1    CH940654    EDW57878.1    DS231825    EDS28170.1    DS232411    EDS41286.1    ATLV01015034    KE524999    KFB39965.1    AXCM01000484    GDIQ01246554    JAK05171.1    CH379058    EAL34354.2    GDHF01021318    JAI30996.1    CH479184    EDW37170.1    GDIP01077147    JAM26568.1    OUUW01000064    SPP90062.1    GAKP01016232    JAC42720.1    JXJN01017195   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000235965    + More
UP000245037    UP000192223    UP000007266    UP000053105    UP000053825    UP000027135    UP000008237    UP000002358    UP000005203    UP000242457    UP000053097    UP000279307    UP000000311    UP000075809    UP000005205    UP000078541    UP000078540    UP000078492    UP000007755    UP000078542    UP000036403    UP000019118    UP000030742    UP000015103    UP000008820    UP000069940    UP000249989    UP000076858    UP000009046    UP000000305    UP000095300    UP000000673    UP000075902    UP000075903    UP000075920    UP000076407    UP000007062    UP000075880    UP000075840    UP000091820    UP000069272    UP000092553    UP000075886    UP000009192    UP000075884    UP000095301    UP000008792    UP000002320    UP000030765    UP000075883    UP000075900    UP000075881    UP000076408    UP000001819    UP000008744    UP000268350    UP000092460   

PRIDE

H9JMU8   

Pfam

PF08551   DUF1751        + More
PF00385   Chromo
PF01393   Chromo_shadow

Interpro

IPR013861   TMEM115/Pdh1/Rbl19        + More
IPR035952   Rhomboid-like_sf       
IPR008251   Chromo_shadow_dom       
IPR000953   Chromo/chromo_shadow_dom       
IPR017984   Chromo_dom_subgr       
IPR023779   Chromodomain_CS       
IPR023780   Chromo_domain       
IPR016197   Chromo-like_dom_sf       

SUPFAM

SSF54160   SSF54160       

Gene 3D

1.20.1540.10    

CDD

cd00024  CHROMO

ProteinModelPortal

H9JMU8   A0A2H1VBE3   A0A0L7LJN5   A0A194RDM1   A0A194Q3N6   A0A212ES39   + More
A0A2J7RHU6   A0A2P8XJ93   A0A1W4XUI8   D6WZF9   A0A1B6KNC7   A0A0M8ZSD5   A0A0L7QWX2   A0A067RRC2   E2BNW4   K7ISP7   A0A1W4XK18   A0A088AD27   A0A1B6H8N4   A0A2A3EM74   A0A026WZC0   A0A1B6ETB8   E2AFT0   A0A151X5L9   A0A158NSV2   A0A195EXB8   A0A151I0K2   A0A195DPR0   F4WSJ6   A0A1B6D489   E9IPX5   A0A195CT02   A0A0J7L0K8   A0A0A9WFT4   A0A1Y1L4V0   N6UEU0   A0A0C9RWX6   A0A0P4W4P6   T1HHS6   Q0IFM8   A0A1S4F7R8   A0A0N8D8K4   A0A023EU16   A0A182GWA9   A0A0P5G1G5   A0A0N8CFY1   E0VAX0   E9GJT9   A0A0P5V1V8   A0A1Q3F6K1   A0A224XRE2   A0A0P5V2H8   A0A0K8TMY3   A0A1I8PM05   T1E1H4   W5J912   A0A2M4AEV8   A0A2M4AEA8   A0A2M4AEC5   A0A2M4BMH8   A0A2M4BMI1   A0A2M4BMK4   D3TQJ0   A0A182THV3   A0A182V8L5   A0A2M3ZGV5   A0A182VUT7   A0A182XIP2   A0A1S4H134   Q7QKG4   A0A182JH08   A0A182HG45   A0A1A9W5H8   A0A2M3Z3Z2   A0A182F5A5   A0A2M3Z410   A0A0P6I9E7   A0A0M3QU83   A0A182QAV9   B4KKX6   A0A0N8DL14   A0A182NEK7   A0A1I8MPI8   T1PJ24   B4M9K2   B0W242   B0X6D6   A0A084VPS1   A0A182M801   A0A182RGA2   A0A182K1L6   A0A0P5G6K1   A0A182YFZ1   Q29PD9   A0A0K8UWN0   B4GKK4   A0A0P5Y2B8   A0A3B0KBH3   A0A034VLR7   A0A1B0BN35  

KEGG

101743723    no KO assigned | (RefSeq) transmembrane protein 115

GO

GO:0016021   GO:0006890   GO:0005794   GO:0005634   GO:0030337   GO:0008017   GO:0005525   GO:0031386   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR13377  

Subcellular location

Nucleus  

Length:

372

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

114.43676

Exp number, first 60 AAs:

23.26175

Total prob of N-in:

0.98968

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  69

TMhelix

70  -  92

inside

93  -  104

TMhelix

105  -  127

outside

128  -  136

TMhelix

137  -  156

inside

157  -  176

TMhelix

177  -  199

outside

200  -  372

 

 

Pi

15.935084

Theta

17.754916

Tajima's D

-0.328176

CLR

0.688482

CSRT

0.290085495725214

Interpretation

Uncertain