SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13406  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010905
Annotation
PREDICTED:_NAD(P)H-hydrate_epimerase_isoform_X1_[Amyelois_transitella]
Full name
NAD(P)H-hydrate epimerase      
Alternative Name
NAD(P)HX epimerase
Apolipoprotein A-I-binding protein
Location in the cell
Cytoplasmic   Reliability : 1.353
 

Sequence

CDS
ATGTTATTGTACAGGTTGTTCGGGAGTGCTCTAATATTGCGTGTAGCAAAACTGTATAACATCGGAACTATGACGAGCAGTATGAATCAATGCAACACTGTGACGCGGTACCTCAATCAGTCAGAAGCGGCAGCACTGGACCAGGATCTTTTCACTGAATACAAGTTTAGTGTCGATCAACTTATGGAACTTGCTGGCCTGAGTGTTGCTAGTGCCATTGCCAAGGTCTTCCCACCCTCAACTCACTCATCAGCTCTTATAGTGTGCGGGCCAGGAAATAATGGAGGAGATGGTTTAGTAGCCGCAAGACATATGCAGTTGTTCGGATACAATGTATCGGTACATTATCCTAAACGCACACCCAAACCTTTGTATGAAAACCTTCTGGAACAATGCATAAGATTCAATGTTAATATAATTGATAAATTACCAGACACTAAAGATTTAAATAATGAATATAAGGTACTTGTTGATGCCTTATTTGGGTTTAGTTTTAAACCACCAGTACGGGAAGAATTGAAGCCAGCATTGGATGCGCTAATTGATTCTAATTTACCCGTATGCAGTGTCGATATACCTAGTGGCTGGGATGTCGAAAAAGGCCCAGGTGAAGGAAGAGCATTAAAACCTGCACTACTAATATCACTTTCTGCACCTAAGCTATGCGCCAAACCAGAGTTCTTAAGGAACACCAAACATTATTTGGGAGGAAGATTTCTGCCAACTGATATATTGAAGAAATATAATTTAGAAATTCCACAATATCCTGATCAGGAACAAATTGTAAAATTATCTTGTTAA
Protein
MLLYRLFGSALILRVAKLYNIGTMTSSMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHSSALIVCGPGNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRFNVNIIDKLPDTKDLNNEYKVLVDALFGFSFKPPVREELKPALDALIDSNLPVCSVDIPSGWDVEKGPGEGRALKPALLISLSAPKLCAKPEFLRNTKHYLGGRFLPTDILKKYNLEIPQYPDQEQIVKLSC

Summary

Description
Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
Catalytic Activity
(6R)-NADHX = (6S)-NADHX
(6R)-NADPHX = (6S)-NADPHX
Cofactor
K(+)
Subunit
Homodimer. Interacts with APOA1 and APOA2.
Similarity
Belongs to the NnrE/AIBP family.
Keywords
Complete proteome   Isomerase   Metal-binding   NAD   NADP   Nucleotide-binding   Potassium   Reference proteome  
Feature
chain  NAD(P)H-hydrate epimerase
EC Number
5.1.99.6
EMBL
BABH01029173    AK401399    BAM18021.1    KQ459586    KPI98064.1    AGBW02012888    + More
OWR44280.1    KQ460323    KPJ15937.1    ODYU01001647    SOQ38164.1    GAIX01009075    JAA83485.1    JTDY01000878    KOB75577.1    NEVH01020984    PNF20216.1    IACF01001231    LAB66943.1    GECU01015794    JAS91912.1    BDGG01000008    GAV02684.1    JRES01001642    KNC21262.1    JXJN01001847    CCAG010020168    CP012528    ALC48558.1    GEDC01031751    JAS05547.1    CM000162    EDX02906.1    CH480830    EDW45680.1    GFXV01001841    MBW13646.1    AE014298    AY094914    BT050512    CH954180    EDV46197.1    GANO01000615    JAB59256.1    NNAY01001055    OXU25321.1    GECZ01020637    JAS49132.1    GGMS01015220    MBY84423.1    PYGN01000371    PSN47526.1    CH940651    EDW65972.1    IAAA01022721    LAA07399.1    IAAA01022720    LAA07397.1    GGMR01004682    MBY17301.1    CH916370    EDV99805.1    DS234992    GGFL01002238    MBW66416.1    GEDV01005195    JAP83362.1    CH933814    KRG07493.1    EDW05702.1    GEFH01004924    JAP63657.1    GDAI01000971    JAI16632.1    KK117371    KFM70286.1    GFAC01003351    JAT95837.1    ABLF02014751    AK342249    BAH72352.1    GFPF01006074    MAA17220.1    GACK01008496    JAA56538.1    KQ414596    KOC70039.1    CH964239    EDW82145.1    CH902644    EDV34787.1    KQ971315    KYB29015.1    UFQS01002464    UFQT01002464    SSX14101.1    SSX33517.1    KK852669    KDR18838.1    GACK01010039    JAA54995.1    ADMH02000300    ETN67052.1    GEZM01036219    JAV82892.1    GACK01010052    JAA54982.1    JO844938    AEO36555.1    GL771866    EFZ09283.1    NIVC01001485    PAA67400.1    JXUM01096457    KQ564265    KXJ72506.1    GAKP01001092    JAC57860.1    GBXI01017252    JAC97039.1    LBMM01001988    KMQ95441.1    NIVC01001519    PAA66962.1    GAKP01001094    JAC57858.1    GFAA01001079    JAU02356.1    GEBQ01005350    JAT34627.1    AAAB01008982    GL732619    GL888331    EGI62693.1    GFDF01002155    JAV11929.1    KK855361    PTY22189.1    AXCM01004705    CH477255    KQ976701    KYM77215.1    KQ981768    KYN36018.1    ADTU01003758    GGFK01012806    MBW46127.1    GDHF01030654    GDHF01019438    GDHF01015252    JAI21660.1    JAI32876.1    JAI37062.1   
Pfam
PF03853   YjeF_N
Interpro
IPR032976   YJEFN_prot_eukaryotes        + More
IPR004443   YjeF_N_dom       
IPR036652   YjeF_N_dom_sf       
SUPFAM
SSF64153   SSF64153       
Gene 3D
PDB
3ROZ     E-value=7.23326e-64,     Score=617

Ontologies

Topology

Subcellular location
Mitochondrion   In sperm, secretion gradually increases during capacitation.   With evidence from 1 publications.
Secreted   In sperm, secretion gradually increases during capacitation.   With evidence from 1 publications.
Length:
266
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05567
Exp number, first 60 AAs:
0.05362
Total prob of N-in:
0.00865
outside
1  -  266
 
 

Population Genetic Test Statistics

Pi
18.718916
Theta
17.864766
Tajima's D
0.351234
CLR
0.696137
CSRT
0.47627618619069
Interpretation
Uncertain
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