Gene

KWMTBOMO13403

Pre Gene Modal

BGIBMGA010850

Annotation

PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_17-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr22(+):16198183-16199023      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.671 Mitochondrial   Reliability : 1.05

CDS

ATGACTTCGACGGACACATATCAATTGAAATGGCACTCGCACAGTTCGCATTTGAACGGTTCGGTGGCGGCTCTGTTGCGTTCGGAGCGTTTCACCGACGTCGTCTTGTGCACTATGGACGGCTCGCAAATACCGGCCCACAAGTTCATACTGAGTTCGTGCAGCGTGTACCTGAGCGGTCTGTTCGAGGGCCAGAGGTCTGTTATGAGGATGGGAGGGATGCTGTACGTGGTGCTTCCGCCGGAAATATCGACGAAGGCCCTGAAGATTTTAGTCGAATACATGTATAAAGGTATCTATACATATAAATAA

Protein

MTSTDTYQLKWHSHSSHLNGSVAALLRSERFTDVVLCTMDGSQIPAHKFILSSCSVYLSGLFEGQRSVMRMGGMLYVVLPPEISTKALKILVEYMYKGIYTYK

Uniprot

H9JMU7   A0A2A4J2K1   A0A0L7LK60   A0A212ES17   A0A2H1V0C9   A0A194REP6   + More
A0A194PXJ7   A0A2J7Q7J7   A0A2J7Q7J5   A0A026WCK8   A0A2R7VQH7   A0A3L8DET3   E2A946   A0A1W4WGA4   A0A154NZC9   A0A195DQM2   A0A151WSD3   A0A151I6B8   E9IPB5   F4X278   A0A195EWI2   A0A2P8Y1I9   A0A2A3EF16   A0A088AW54   V9IJ43   A0A158NAL1   T1IC34   A0A0L7QTI8   A0A067R0Z8   A0A0J7KV45   A0A0M9A8D7   A0A0C9RMD8   A0A1B6HZK0   A0A2S2PD88   A0A1S3DBE2   A0A1B0CVV2   K7IXK7   A0A232F5R9   A0A2H8TPI3   A0A2S2P789   J9JNW4   A0A151INJ8   A0A1B6DYH4   A0A182G3U2   A0A0T6B7P0   Q0IG94   A0A1B6K961   A0A1B6FWZ2   D6WRS4   B0VZ89   A0A182FHX3   A0A1I8P287   Q6NR60   A0A0K8UYP0   A0A1Q3FWD0   A0A0K8VF50   A0A0K8VXI6   A0A1I8P261   A0A034W2S4   A0A336LX71   A0A182MVU9   A0A182Q8C0   Q7PP86   W5J855   A0A0A1WK03   A0A0K8VDV6   A0A182S5A8   A0A1Y9IWE9   A0NEH2   A0A182NJS9   B4IX26   A0A1A9Z2R1   A0A182TI44   A0A0M4E8B8   A0A182U6U0   A0A2Y9D142   A0A182V9M8   A0A182L339   A0A1B0BHX7   B7TZ80   A0A1A9UJC8   B5DPX0   B4LFS7   B4HJJ5   A0A182K5B9   A0A0Q9WI00   A0A0Q9WU06   A0A182XMN6   B4QM35   A0A3B0KL33   A0A0Q9XKE4   B4KXF4   W8B7N9   B4N5B3   A0A1W4UF98   A0A1W4US53   A0A1A9WTG6   A0A182PSE5   A0A182T144  

Pubmed

19121390    26227816    22118469    26354079    24508170    30249741    + More
20798317    21282665    21719571    29403074    21347285    24845553    20075255    28648823    26483478    17510324    18362917    19820115    25348373    12364791    14747013    17210077    20920257    23761445    25830018    17994087    20966253    19074311    15632085    23185243    22936249    24495485   

EMBL

BABH01029174    BABH01029175    BABH01029176    NWSH01003854    PCG65754.1    JTDY01000878    + More
KOB75581.1    AGBW02012888    OWR44282.1    ODYU01000073    SOQ34216.1    KQ460323    KPJ15934.1    KQ459586    KPI98066.1    NEVH01017442    PNF24554.1    PNF24553.1    KK107320    EZA52784.1    KK854024    PTY09646.1    QOIP01000009    RLU18955.1    GL437711    EFN70031.1    KQ434786    KZC05036.1    KQ980612    KYN15146.1    KQ982779    KYQ50738.1    KQ976413    KYM90376.1    GL764479    EFZ17581.1    GL888565    EGI59494.1    KQ981954    KYN32252.1    PYGN01001050    PSN38109.1    KZ288263    PBC30327.1    JR047834    AEY60521.1    ADTU01010369    ADTU01010370    ACPB03017885    KQ414755    KOC61791.1    KK853114    KDR11194.1    LBMM01002793    KMQ94357.1    KQ435727    KOX78023.1    GBYB01008146    JAG77913.1    GECU01027599    GECU01016333    JAS80107.1    JAS91373.1    GGMR01014539    MBY27158.1    AJWK01031290    AJWK01031291    AAZX01012543    NNAY01000966    OXU25697.1    GFXV01004250    MBW16055.1    GGMR01012157    MBY24776.1    ABLF02036215    KQ976932    KYN07044.1    GEDC01006566    JAS30732.1    JXUM01041341    KQ561279    KXJ79117.1    LJIG01009304    KRT83348.1    CH477261    EAT45663.1    GEBQ01031991    JAT07986.1    GECZ01015053    JAS54716.1    KQ971354    EFA07070.1    DS231813    EDS25653.1    BT010218    BT015968    AAQ23536.1    AAV36853.1    GDHF01020537    JAI31777.1    GFDL01003146    JAV31899.1    GDHF01014826    JAI37488.1    GDHF01019280    GDHF01008740    JAI33034.1    JAI43574.1    GAKP01010877    GAKP01010874    JAC48078.1    UFQT01000264    SSX22564.1    AXCM01010009    AXCN02000521    AAAB01008960    EAA10874.4    ADMH02001883    ETN60652.1    GBXI01015276    JAC99015.1    GDHF01015263    JAI37051.1    EAU76493.2    CH916366    EDV96332.1    CP012525    ALC43104.1    APCN01001494    JXJN01014624    FJ418631    ACJ35280.1    CH379069    EDY73694.1    KRT08132.1    KRT08133.1    CH940647    EDW69304.2    CH480815    EDW40719.1    KRF84317.1    KRF84318.1    CM000363    CM002912    EDX09718.1    KMY98396.1    OUUW01000012    SPP87279.1    CH933809    KRG06298.1    EDW18640.1    GAMC01017314    GAMC01017312    GAMC01017310    JAB89241.1    CH964101    EDW79552.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    + More
UP000235965    UP000053097    UP000279307    UP000000311    UP000192223    UP000076502    UP000078492    UP000075809    UP000078540    UP000007755    UP000078541    UP000245037    UP000242457    UP000005203    UP000005205    UP000015103    UP000053825    UP000027135    UP000036403    UP000053105    UP000079169    UP000092461    UP000002358    UP000215335    UP000007819    UP000078542    UP000069940    UP000249989    UP000008820    UP000007266    UP000002320    UP000069272    UP000095300    UP000075883    UP000075886    UP000007062    UP000000673    UP000075900    UP000075920    UP000075884    UP000001070    UP000092445    UP000075902    UP000092553    UP000075840    UP000075903    UP000075882    UP000092460    UP000078200    UP000001819    UP000008792    UP000001292    UP000075881    UP000076407    UP000000304    UP000268350    UP000009192    UP000007798    UP000192221    UP000091820    UP000075885    UP000075901   

PRIDE

H9JMU7    Q6NR60   

Pfam

PF00651   BTB        + More
PF00096   zf-C2H2

Interpro

IPR000210   BTB/POZ_dom        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR007110   Ig-like_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF54695   SSF54695       

ProteinModelPortal

H9JMU7   A0A2A4J2K1   A0A0L7LK60   A0A212ES17   A0A2H1V0C9   A0A194REP6   + More
A0A194PXJ7   A0A2J7Q7J7   A0A2J7Q7J5   A0A026WCK8   A0A2R7VQH7   A0A3L8DET3   E2A946   A0A1W4WGA4   A0A154NZC9   A0A195DQM2   A0A151WSD3   A0A151I6B8   E9IPB5   F4X278   A0A195EWI2   A0A2P8Y1I9   A0A2A3EF16   A0A088AW54   V9IJ43   A0A158NAL1   T1IC34   A0A0L7QTI8   A0A067R0Z8   A0A0J7KV45   A0A0M9A8D7   A0A0C9RMD8   A0A1B6HZK0   A0A2S2PD88   A0A1S3DBE2   A0A1B0CVV2   K7IXK7   A0A232F5R9   A0A2H8TPI3   A0A2S2P789   J9JNW4   A0A151INJ8   A0A1B6DYH4   A0A182G3U2   A0A0T6B7P0   Q0IG94   A0A1B6K961   A0A1B6FWZ2   D6WRS4   B0VZ89   A0A182FHX3   A0A1I8P287   Q6NR60   A0A0K8UYP0   A0A1Q3FWD0   A0A0K8VF50   A0A0K8VXI6   A0A1I8P261   A0A034W2S4   A0A336LX71   A0A182MVU9   A0A182Q8C0   Q7PP86   W5J855   A0A0A1WK03   A0A0K8VDV6   A0A182S5A8   A0A1Y9IWE9   A0NEH2   A0A182NJS9   B4IX26   A0A1A9Z2R1   A0A182TI44   A0A0M4E8B8   A0A182U6U0   A0A2Y9D142   A0A182V9M8   A0A182L339   A0A1B0BHX7   B7TZ80   A0A1A9UJC8   B5DPX0   B4LFS7   B4HJJ5   A0A182K5B9   A0A0Q9WI00   A0A0Q9WU06   A0A182XMN6   B4QM35   A0A3B0KL33   A0A0Q9XKE4   B4KXF4   W8B7N9   B4N5B3   A0A1W4UF98   A0A1W4US53   A0A1A9WTG6   A0A182PSE5   A0A182T144  

PDB

6CQ1     E-value=0.00405703,     Score=88

KEGG

101736836    no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 17-like

GO

GO:0003676   GO:0008168   GO:0005634   GO:0006357   GO:0005515   GO:0008152   GO:0007018   GO:0008017   GO:0005525   GO:0031386   GO:0048869   GO:0016491   GO:0015930  

Length:

103

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.2944

Exp number, first 60 AAs:

0.41573

Total prob of N-in:

0.65976

inside

1  -  103

 

 

Pi

17.556814

Theta

15.904258

Tajima's D

0.763795

CLR

0

CSRT

0.599670016499175

Interpretation

Uncertain