SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13401
Annotation
PREDICTED:_uncharacterized_protein_LOC106709836_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.702 Mitochondrial   Reliability : 1.012 Nuclear   Reliability : 1.232
 

Sequence

CDS
ATGTTAACGTTTTGTTTATCAGATCGCCACACGCATTCGCCTGAAGTGGAACGTGAGCGAGCTACATTAACGGAGCTGTTGTCTACAATGACCCTGGGACAACTGTTACCGCATCCGCTGAGCCATATGTTGGAATTAGCACCTGAGCTTACTCCGAACGAGATTGTACAAGTACTCCGTGACTGTTTGTGGAACTACACACGGGACCACGTCCCGTCGCCTGCTTTATTTACGTGTGACGCTACAGGCTTGCACTGGCGCGATCCGTCATCTTGCAAACCACCGGCCTTATATACGGATACTTTGAGGATTATAATACAGAAAAGAATAGCGAAATTGGGACATTTGTATCCCATAATGTTTTTGAATCTTGAAAAGGAAAGCAGTAATTAA
Protein
MLTFCLSDRHTHSPEVERERATLTELLSTMTLGQLLPHPLSHMLELAPELTPNEIVQVLRDCLWNYTRDHVPSPALFTCDATGLHWRDPSSCKPPALYTDTLRIIIQKRIAKLGHLYPIMFLNLEKESSN

Summary

EMBL
KQ459586    KPI98067.1    KQ460323    KPJ15933.1    AGBW02012888    OWR44283.1    + More
GEZM01072446    JAV65518.1    LJIG01022844    KRT78423.1    GEZM01072445    JAV65519.1    GEDC01018191    JAS19107.1    GEDC01013980    JAS23318.1    KQ971371    EFA10179.2    GECU01036006    JAS71700.1    APGK01043340    KB741014    ENN75427.1    KB632381    ERL94154.1    GECZ01031520    JAS38249.1    GECU01005128    JAT02579.1    GFDL01014178    JAV20867.1    GBHO01009861    JAG33743.1    GEBQ01016278    JAT23699.1    GECU01036743    JAS70963.1    KK852801    KDR16305.1    GECZ01017895    JAS51874.1    PYGN01000872    PSN39828.1    GDHC01006031    JAQ12598.1    NEVH01009770    PNF32705.1    ATLV01026890    KE525420    KFB53498.1    GBRD01007478    JAG58343.1    AJVK01018647    AJVK01018648    GBHO01009862    JAG33742.1    ADMH02001656    ETN61540.1    AXCM01000623    AJWK01008878    AAAB01008879    EAA08442.5    APCN01002124    ACPB03001414    DS235824    EEB17839.1    AXCN02000045    ABLF02019319    UFQS01000141    UFQT01000141    SSX00400.1    SSX20780.1    GBBI01004666    JAC14046.1    GFTR01008285    JAW08141.1    GGMR01019610    MBY32229.1    GFXV01000195    MBW12000.1    KK855137    PTY21092.1    CP012526    ALC47356.1    ALC45267.1    JXJN01015757    CCAG010002945    GAMC01015582    JAB90973.1    GAKP01004304    JAC54648.1    JRES01000501    KNC30668.1    GDHF01010009    JAI42305.1    KA648247    AFP62876.1    GAKP01004305    JAC54647.1    GBXI01000575    JAD13717.1    GGMS01005616    MBY74819.1    GL446071    EFN88542.1    CH933806    EDW16726.1    CH940650    EDW67383.1    KK107133    QOIP01000011    EZA58122.1    RLU16460.1    KQ976537    KYM81411.1    ADTU01018656    ADTU01018657    GL887908    EGI69425.1    KQ981693    KYN37605.1    KQ982579    KYQ54555.1    OUUW01000013    SPP87835.1    CH479179    EDW24137.1    CM000070    EAL28160.4    KRT00509.1    CH916369    EDV92978.1    KQ978928    KYN27489.1    KQ978344    KYM94915.1    KQ760974    OAD58560.1    CAQQ02191425    CH902617    EDV41710.1    GBYB01005902    JAG75669.1   
Pfam
PF14837   INTS5_N        + More
PF14838   INTS5_C
Interpro
IPR016024   ARM-type_fold        + More
IPR029445   INTS5_N       
IPR029444   INTS5_C       
IPR040316   INTS5       
SUPFAM
SSF48371   SSF48371       

Ontologies

Topology

Length:
130
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00526
Exp number, first 60 AAs:
0.00343
Total prob of N-in:
0.12128
outside
1  -  130
 
 

Population Genetic Test Statistics

Pi
16.577075
Theta
13.714514
Tajima's D
-0.403006
CLR
0.486782
CSRT
0.262136893155342
Interpretation
Uncertain
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