SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13397
Pre Gene Modal
BGIBMGA010909
Annotation
PREDICTED:_leucine-rich_repeat-containing_protein_74B-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.836
 

Sequence

CDS
ATGTCATCAAGTTCTTCGAACTATTCCGAAGTTCCGCAAATTGAATCCATTTACGAAAACCCTAAATCGTCTTCATCGGAAGAGCCTCCGATAGAAGAATGGTCATCTTTATACCTTGGTACTCCACCGGACAGTCCAAAGATGGTTCTCTACAAACAAGGACTTTACGATCCGGGAAGTGGAGAGATCTGTGCGAAATATATCGGTTTGTCGGACAGTGAAGTGTTCAGACATCCATACAGTTCATACCCTCGCATCAAAGATCCTGGGATAGAAACGTCGTTATTGGACCCAGGTATTTAA
Protein
MSSSSSNYSEVPQIESIYENPKSSSSEEPPIEEWSSLYLGTPPDSPKMVLYKQGLYDPGSGEICAKYIGLSDSEVFRHPYSSYPRIKDPGIETSLLDPGI

Summary

Pfam
PF13516   LRR_6        + More
PF00560   LRR_1
Interpro
IPR001611   Leu-rich_rpt        + More
IPR032675   LRR_dom_sf       
Gene 3D

Ontologies

GO

Topology

Length:
100
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00036
Exp number, first 60 AAs:
0.00015
Total prob of N-in:
0.22098
outside
1  -  100
 
 

Population Genetic Test Statistics

Pi
15.950197
Theta
16.107699
Tajima's D
-0.029482
CLR
0
CSRT
0.366881655917204
Interpretation
Uncertain
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