SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13372
Pre Gene Modal
BGIBMGA010931
Annotation
PREDICTED:_kinesin-like_protein_KIF18A_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr22(+):15385302-15391432      View in EpiBrowser
Full name
Kinesin-like protein      
Location in the cell
Nuclear   Reliability : 3.522
 

Sequence

CDS
ATGGTGAAAATAGAGAAGCGGCCCGTCGCTACGGGTTTTAAAGGCTCTGGTGGTGGAATAGTGCCGTCTAAATGCGGTTCTACACAAAACATGGCTGCGAACATCAAAGTTGTAGTGAGAGTACGTCCTTTGAACGAAAAAGAGTTGGATCTCAACAGTCGCGTTGTTGTAGACGTCGTAGATGACAAAATGTTAGTGTTTGACCCTAAGGAAGAGATCAGGCCATTCTTCTACCAGGGTGTACAGCAACCGAACAAAAACTTTTTAAAACGTGCTAATAAAGAGTTGAAGTTTGTTTTTGATAATGTTTGTGGTCAAGAAGCATCGAATAAGGACGTTTTTGAAACTACAACGAAAGATATGCTTGCGGCTCTGATGGAAGGCTACAATTGTTCAGTATTTGTGTATGGCGCTACTGGTGCAGGGAAGACATTCACTATGATCGGCAGTAATGAGCACCCTGGCATAACTTACCTGACCATGGAACATCTGTTCTATACTATTAATCAGTTTGAAAAGGAGAGGGAATTTGATATAGGAGTCTCTTATATTGAAGTATACAATGAAAATGTATATGATCTCCTTAAACCTTCAAAAACTCCCTTGCAACTTCGAGAGGACTCAAAGTATGGTGTTATGGTTGCCGGTCTGACACTGAACAATATTAAAACAGCTAGGGAACTCCTTAACATGCTTGAAAATGGAAACAAGAACAGGACCCAGCATCCTACAGATGCAAATGCTGAGAGTTCAAGAAGTCATGCTGTTTTTCAGGTATATGTAAAAATGAGATACAAAACTAGCAGTCAACTACGTCTTGTTAAGCTATCAATGATTGATTTGGCTGGAAGTGAGCGAGCTTCTGCTACAGGTTGCGTGGGAGAGAGGTTTAAAGAAGGTGCCAATATCAACAAGAGTTTGCTATCGTTAGGCAATTGTATTAATAAACTAGCTGATGGAAGCAACTACATTCCGTACAGAGACTCAAAATTAACTCGGTTGCTAAAGGACAGCCTAGGTGGTAACTGTAAAACGGTGATGATAGCAAATGTATCTCCGTCAAGTGTCAGTTACGAAGATACATACAATACTCTCAAGTATGCAGCTAGAGCTAATAAGATTCAGCTCAGTATTAAGAAGAACATTGTTGACGGTGACATGCGCTTGTCACAATATGTGAAGATTAATGAAGAATTGAAAAAGAAAGTAAAAGAGTTGGAAGCCAAGCTGTCTTTGTCTAGCGTTAAAAATGTGTCAAAAGAACCTGACATGGTGAAGGAGAAAGCGATAAAGGAATGGCGGCGTCGCATCATTGACTGCGATTCTGTTCATGCTTCATTGGAGACCGAATTATTGAACTTGATGTCGAGACAACGGGTGCTGGCCTTGCGACAGCGTTTACGGACCAGAGCATTCTCGCATGTCGCCGATCTAGCGCATCGATCCTCCTACGAGGCAATGGAACAGGTTTGCAATGAAGATATACCGAGGCAAGAAAGAGCAGCTGAAAGCTACATAAAACAAACGGTGCACTTAGATTCTCAGATAATGTCGACTTGGACTAAATGGGATGACAGTCGCAAGAGACTACATGTAGTATGCAATCAAGCTGTATCTGACTTCACTGAATTAGCTGATTTTGTGGAAAACATACATTTAAAGAGTGAACTTAGACATATAAAGGCTAGAGATAACCTCAGATACAAATTATTGTCCATTGAAAATGAAGAAATCAATGCCTTCACTGAATATATGAGCGAAATGCCAAGCATGCTTAAGAAATTATATCTAACATTAAAAGGCTATGACAAAGCACCCCCAGCTTTGACTGCTGAATATATAGAAATAATGAAAAAAGCGAAATTAGCTAAGGCCATCACATGGTCTGACAAAGACAGTGAAATCGATTCTAATTTCAAATTCATATCGAGCCTAGATATACAGAAGCCAACAACCGCCATAGACTACGACAAGAAGGATGAAGGCAACATGACCATAGACATAATGACAGACAGTGATGATTTGACCGACATTGAAAACAGAGAGCCGATTAAAGTTCTTAAACGTAAAGGGACGCCAATTAAACTGCCAAATAATGAAACCATATTAATTAATGACTCCTTTGAAAGTTTGGATGCGACCAGAAATCTTAACTCAGCCAAGAAAATCAAAAGGGAGAAAGAATTTGACATTGCTCCTGATATTGAAAACTACAACGTAGTAGATCCTAACGATTTGAATTCTACCTTTGTGTTGGCGGGTAAAATGGACGCATTGAGGAAACCAATCAAGACCGAATCAAAAGTGGAAGTACAACCAGTCAAGAGAGGACTCGTGGATAGGACTAATACTATACAAAGGACAATTAACTTCGGTGATAAGGCTAAGCTAGTGAAACCCGTAGTGGGTAAAGCGATACCGTTCCGGCGGCCCGGCCCGCAGCCCGGCGCGCCGCGGGGGCCCGGCTTCGGGTCCAGCCTGTCCCGCGACGGAACTCCGCTGCAGAGGAACGTGCAAGACGCGTCTCGTACAAAGACGAATGTCACTCAAAAGTCAGTTGGTTTCAAAGCCGTCCGCGCGAGGGAGCGCGTGCAGAACCACCCCTACTCCAGGCCGCCCGCCCTCGCCGCCAGGAAGTGA
Protein
MVKIEKRPVATGFKGSGGGIVPSKCGSTQNMAANIKVVVRVRPLNEKELDLNSRVVVDVVDDKMLVFDPKEEIRPFFYQGVQQPNKNFLKRANKELKFVFDNVCGQEASNKDVFETTTKDMLAALMEGYNCSVFVYGATGAGKTFTMIGSNEHPGITYLTMEHLFYTINQFEKEREFDIGVSYIEVYNENVYDLLKPSKTPLQLREDSKYGVMVAGLTLNNIKTARELLNMLENGNKNRTQHPTDANAESSRSHAVFQVYVKMRYKTSSQLRLVKLSMIDLAGSERASATGCVGERFKEGANINKSLLSLGNCINKLADGSNYIPYRDSKLTRLLKDSLGGNCKTVMIANVSPSSVSYEDTYNTLKYAARANKIQLSIKKNIVDGDMRLSQYVKINEELKKKVKELEAKLSLSSVKNVSKEPDMVKEKAIKEWRRRIIDCDSVHASLETELLNLMSRQRVLALRQRLRTRAFSHVADLAHRSSYEAMEQVCNEDIPRQERAAESYIKQTVHLDSQIMSTWTKWDDSRKRLHVVCNQAVSDFTELADFVENIHLKSELRHIKARDNLRYKLLSIENEEINAFTEYMSEMPSMLKKLYLTLKGYDKAPPALTAEYIEIMKKAKLAKAITWSDKDSEIDSNFKFISSLDIQKPTTAIDYDKKDEGNMTIDIMTDSDDLTDIENREPIKVLKRKGTPIKLPNNETILINDSFESLDATRNLNSAKKIKREKEFDIAPDIENYNVVDPNDLNSTFVLAGKMDALRKPIKTESKVEVQPVKRGLVDRTNTIQRTINFGDKAKLVKPVVGKAIPFRRPGPQPGAPRGPGFGSSLSRDGTPLQRNVQDASRTKTNVTQKSVGFKAVRARERVQNHPYSRPPALAARK

Summary

Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
Uniprot
H9JN28   A0A2H1V6N9   A0A194PM59   A0A194RIJ0   A0A212F7I8   A0A0C9RWY3   + More
A0A195CB67   E2A1Y2   A0A151I4P3   A0A158NT00   A0A1B6M212   A0A1B6M2I1   A0A1Q3G1A2  
Pubmed
19121390    26354079    22118469    20798317    21347285   
EMBL
BABH01030513    ODYU01000963    SOQ36510.1    KQ459601    KPI94068.1    KQ460205    + More
KPJ17145.1    AGBW02009865    OWR49705.1    GBYB01012376    JAG82143.1    KQ978023    KYM98047.1    GL435856    EFN72558.1    KQ976472    KYM83989.1    ADTU01025462    GEBQ01010001    JAT29976.1    GEBQ01009855    JAT30122.1    GFDL01001471    JAV33574.1   
Proteomes
UP000005204    UP000053268    UP000053240    UP000007151    UP000078542    UP000000311    + More
UP000078540    UP000005205   
PRIDE
H9JN28   
Pfam
PF00225   Kinesin
Interpro
IPR027417   P-loop_NTPase        + More
IPR001752   Kinesin_motor_dom       
IPR027640   Kinesin-like_fam       
IPR036961   Kinesin_motor_dom_sf       
IPR019821   Kinesin_motor_CS       
SUPFAM
SSF52540   SSF52540       
Gene 3D
3.40.850.10    
ProteinModelPortal
H9JN28   A0A2H1V6N9   A0A194PM59   A0A194RIJ0   A0A212F7I8   A0A0C9RWY3   + More
A0A195CB67   E2A1Y2   A0A151I4P3   A0A158NT00   A0A1B6M212   A0A1B6M2I1   A0A1Q3G1A2  
PDB
5OGC     E-value=4.89323e-106,     Score=986

Ontologies

KEGG
101746241    K10401 kinesin family member 18/19 | (RefSeq) kinesin-like protein KIF18A
GO
GO:0007018   GO:0008017   GO:0003777   GO:0005524   GO:0005874   GO:0005525   GO:0031386   GO:0048869   GO:0003676   GO:0016491   GO:0015930  
PANTHER
PTHR24115  

Topology

Length:
879
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.48099
Exp number, first 60 AAs:
0.00086
Total prob of N-in:
0.02304
outside
1  -  879
 
 

Population Genetic Test Statistics

Pi
17.770144
Theta
17.961884
Tajima's D
0.159574
CLR
2.032524
CSRT
0.422828858557072
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号