SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13371
Annotation
olfactory_receptor_36_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.762
 

Sequence

CDS
ATGGGCATCGTGAAGACATGCTTCTTCCAAAAAGACTACAACGTCTGGCAGGATCTCGTTAGTTTTATTTCGAAAACCGAACGGGATCAAATAGCAAAGAAAGATCCAAAAAGTATTAAAACAATACAGAGCTACATCTCTCGTAATCGTAAAATTACATATTCGTTCTGGGCCCTAGCATTCATCGCAAACATTGGTGTTTTTAGTAAGCCATATCAAAATAATCAGAGCGACGTTAACGGCACTGTTACCTACAATCACCTTTTCGATGGCTATACACCATTCTCAGAAGAACCACCGGGGTATTATTTTTCCATGGGAATCGAAACTATACTGGGTCATGTCGTAAGCTTCTATGTCTTGGGCTGGGACACTCTGGTTGTGTCCATAATGATATTCTTCGCCGGTCAGATGCAAATGTCTCGACTGCAATGCTCGAGGATGATAAATGGAAGCCCGGAGCGGACTCATAAAAATATAATTAAATGTCATAAATTTCACACGGATTTGATCAAGTACCAAAAACAATTTAATTCGCTTATATCCCCGGTGATGTTTGTTTATTTATTCGTAAGCTCCATCAATCTTAGCGTTTGCATCGTTCAGATTGCAGAGATAGAAGACGATTTCGCTACAGTATTATCAAGCTTCATCTTCTTGCTGGCGTGTCTAATACAGCTGCTACTATTCTATTGGCATAGCAATGAAGTTACGGTTCAAAGCGAACTAGTAAGCTACAGTACTTTTGAAAGTAACTGGACATCCACACAGAATAAACTACAGAAAGAAGTGGCCCTACTAGGTCTAACAACGTCCAAAACGCTGGTCTTCACAGCTGGTTCCTTCAATCATATGACCTTAGCGACTTTCATATCTATCATAAGAGCAAGCTACAGTTTCTACGCTTTACTGAATAGTACCAAATATTAA
Protein
MGIVKTCFFQKDYNVWQDLVSFISKTERDQIAKKDPKSIKTIQSYISRNRKITYSFWALAFIANIGVFSKPYQNNQSDVNGTVTYNHLFDGYTPFSEEPPGYYFSMGIETILGHVVSFYVLGWDTLVVSIMIFFAGQMQMSRLQCSRMINGSPERTHKNIIKCHKFHTDLIKYQKQFNSLISPVMFVYLFVSSINLSVCIVQIAEIEDDFATVLSSFIFLLACLIQLLLFYWHSNEVTVQSELVSYSTFESNWTSTQNKLQKEVALLGLTTSKTLVFTAGSFNHMTLATFISIIRASYSFYALLNSTKY

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
AB472115    BAH66333.1    BK005942    DAA05992.1    LN885126    CUQ99415.1    + More
KT588153    AOE48063.1    ODYU01000963    SOQ36511.1    KY707228    AVF19670.1    GENK01000085    JAV45828.1    MH193994    AZB49440.1    LC002714    BAR43462.1    KY225502    ARO70514.1    RSAL01000068    RVE49272.1    GCVX01000192    JAI18038.1    KM597212    AIT69889.1    KM655548    AIT71998.1    KM892385    AJF23800.1    KM678311    AJE25884.1    KX655960    AOG12909.1    KX084471    ARO76426.1    KY283608    AST36267.1    MG816597    AXF48782.1    JN836703    AFC91743.2    KY283738    AST36397.1    KY283660    AST36319.1    KY283733    AST36392.1    MG816592    AXF48777.1    KY283603    AST36262.1    KX655997    AOG12946.1    KY283655    AST36314.1    AGBW02009312    OWR51104.1    KX585359    ARO70252.1    KX655987    AOG12936.1    JN836695    AFC91735.2    KM655544    AIT71994.1    KX656003    AOG12952.1    KR935726    ALM26218.1    OWR51103.1    GCVX01000184    JAI18046.1    KY225500    ARO70512.1    KF487658    AII01056.1    KT588146    AOE48056.1    KR935746    ALM26238.1    KT588156    AOE48066.1    KF487692    AII01090.1    GDKB01000054    JAP38442.1    MH193977    AZB49423.1    KM892381    AJF23796.1    KY399276    AQQ73507.1    KM678307    AJE25880.1    KX084504    ARO76459.1    ODYU01001027    SOQ36676.1    GEDO01000037    GEDO01000036    JAP88590.1    LN885112    CUQ99401.1    KM678298    AJE25871.1    AB472133    BAH66350.1    KT588136    AOE48046.1    KM597198    AIT69875.1    KM655534    AIT71984.1    KF768685    KZ149966    AIG51879.1    PZC76166.1    LC002716    BAR43464.1    KY283644    AST36303.1    KC960479    AGY14590.1    GENK01000083    JAV45830.1    SOQ36675.1    KY283744    AST36403.1    KX084464    ARO76419.1    JN836696    AFC91736.1    GENK01000069    JAV45844.1    MG816583    AXF48768.1    KM892372    AJF23787.1    KR935724    ALM26216.1    KF487667    AII01065.1    KY283657    AST36316.1    KY399295    AQQ73526.1    KX585360    ARO70253.1    MG546639    AYD42262.1    KF768692    AIG51886.1    AB472109    BAH66326.1    LN885122    CUQ99411.1    KM655545    AIT71995.1    KY707231    AVF19673.1    KY283668    AST36327.1    GCVX01000172    JAI18058.1    GCVX01000206    JAI18024.1    MH193995    AZB49441.1    KY707201    AVF19643.1    KF768693    AIG51887.1    MH193979    AZB49425.1    KF487689    AII01087.1    LC002706    BAR43454.1    NWSH01004938    PCG64574.1    KM678294    AJE25867.1    KF487690    AII01088.1    ODYU01009086    SOQ53253.1    GDKB01000047    JAP38449.1    KU598898    ANZ03144.1    KM892382    AJF23797.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
309
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
105.92294
Exp number, first 60 AAs:
8.08341
Total prob of N-in:
0.93471
inside
1  -  51
TMhelix
52  -  69
outside
70  -  110
TMhelix
111  -  133
inside
134  -  183
TMhelix
184  -  206
outside
207  -  209
TMhelix
210  -  232
inside
233  -  309
 
 

Population Genetic Test Statistics

Pi
36.208116
Theta
25.55293
Tajima's D
1.441401
CLR
0
CSRT
0.781010949452527
Interpretation
Uncertain
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