SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13368
Pre Gene Modal
BGIBMGA004310
Annotation
PREDICTED:_uncharacterized_protein_LOC106130202_isoform_X3_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.988
 

Sequence

CDS
ATGTCAGCTTCGTCAGAATATGAACCTTCGGCCCGGCAAGATTACGGGCCGGCCGCCTCCAGTGAAAATGTCTTTGAAAATGTATTGGATCACAATCTGATAAATATGAATGTACCTAGCATAAGGACTCCTGTTTTGAGGACTGTACCTGTATCTCCCACTCAAAGGGACCCGGAACCGGATTCCACTAATCCTGAAAGCATTATTCGTTCTATACACCAAGTAGATAAGGAAATTGACTATCACATTTCTGAGAAAAGGTGCGATTCCGAAATGTCTGTTGAGACGTTATCTGGTATCGTAAGAATAGAAGAGAATATAGATAACGTAGGCCACATTGCTTACCCAGTTTTGCAAGAAGCAGATGATTCTAGTGACGGTCACTATGTTGAAAACTCTACAGCTCTTATTCAAGCTCCAATCAGCACTGCCATAGTACAGAATGTCACTAAACTACCACAGAATTTTACAATCAATGTCGATGCAGCCGTTGGAAATATCACAACAATACAGAATGTAGCCCAAGATGTGGCTGGCAGTCCAACGTTGTGGTTGCCAACAATACTCACAACTAGTGCTGCTCCTCCGGATTTGAAAGACGATGAAAGACCCCAGGCTGGTGTGTCACAAATCATTATTACCAGTGAAAGCTATGTTAATGAGCTCAACCATGCCGGCCGAAGAGGTAATATTATAGCCGAAACAGGTTACATTAACCGTCCCAAAAGTTCTAAAGTGCAAATTCTAAGTAACATATCTATTCCTAAGAATACTACTTATTCTCAACAGTATATTCCATCTTGTAAAGAGGTATCTACACCAGTTTATGCAACTCAAAACCATGTATACAAACTCAATACGAACTTGCAGAAGCATTTAAATAGTTCAGTTCTCTGCAGTAAACCATCAAAGAATCAGTCTTTAATTGGTTGTGCATCGCTAACCCCAACAGTGATCAACAACAGTCCGATAAAAAATGTATCATACAGTCATACATTTACCAAGAATGCAAGTCTTAGTAAAACTATAAATAAAGTAAACAATGGTGCTAACCTGAATGCGATGGTGGCGTCATCTACTGGAAACACGCCGTGCCACATTCTTTCGCGTGTCGTGTCTGCTCCGAATAAAATGTCTGTACATTCGGGGAGAAAATTAAACACTTTGAAAGGATCTAAAAGCTCGCAGGTATCGAGCCAAAAGAACCAATCGAGGCCAATTAAAATAATACAGCAAACGGGATCATCGACACACAAATCTGAAGCGAAGACTTGGCCTGTCGCCAGTGTCACGTATAAAAGTCAACAGCCGACGTTCGGAGTGGTAGACTCGAATACTTCCAAGATCATTCAGAAAGTCGGCAGTCCGACCCACAAGAACCAATCTATACCACTAACAAAATTTCCTGCAAAAGGCGAGCGATTAATTCTTCAATCCCCGTGCGGCCCAGTGTTGATATCAACGGCCCCCATCAGTACGAGCTTACCCAAAACACCTCATTACGTACAGTCAGGCGCTACTCCGAATTTGCGCTATGTGCAAACTTTTAGTTCGACAGAAAACCAGTCTATGACCTCACAAGTAACTGCCAATCAACAGTTGACTGCTCAAATTCTTCATTCCCTATCCCAACCTAAGCTGATGTTACAGCAAAGCTCACCCACAAATCACACTTTATCTCCAATGCTTCTTGAAGAACCTGTAGAATTAAAACCGGTCAATCAAAAACGGATAGTATTCGGGGACAAATCGACTTTACTCACAGTAGAAGACATAGTCGGAGTAGAAGAGAGACCAAATTTGTCTGAAGAATTGCGACGATATTCTTTCCAACCATTGGCCTTCGTGATGCTAGATCACACATACTCATTACCAGCTCAAAAATTAGCCACCAGTAGTGCCCCCACGACGCCCGTGGCCACCGCTCCCCCGCCCACCGTGGCCACCCCGCCCGCCGCTGCGCCGCCTCCCCCTAGCCCCACGAAGCGCACGTCTCCCGTTATCCTGTCCACGGCCACGTACGAACCCGCGGTCGCCCCGCCCTCCCCCGCCCCCGTCCCGCCGCCACCCGCGGCCCCCGCGCCTCCCGTCGAGGCCGCACCGCTGCCCGACGACGACGCCGCGTCTGTCATATCCTCCCTGGACGGCGACCGGCGCCCCGAAGCGGGCGGCAGCGACACGGAGACCGCTCCCGAAGGCGAAGAAGAAGGTAAGACGCGATGCATCTGCGACTTCACCCACGACGACGGGTACATGATATGTTGTGATCGTTGCGGCGAATGGCAGCATGTGGACTGCATGGGCATCGACCGCCAGAACATTCCCGACGCATACATGTGCGAGCTGTGCCAGCCGCGTCCCATTGACCGTCGCCACGCTCGCGCCATCCAGATGAGGAAAAGGGAAGAACTGAACGCCCTAGGAGCGTCCGACTCTGACTCGTCTGAATGTCTGAGACAATCCGGTCAGCGGAGGAAGCGGTTGCTCACTGTCACAACTTACACGAACACTAGCAGGTCCAGCGTGACCACGTATAATTCTGCCGCACCTGCCGCGCCGACTGCGCTGCCGACCTTGCCGACGTCAACTCTACCGCCTGTAGCCAAACGCGGCCCCAAGAAACCAAAAAAGCCAGATGTGATGCGAAAAGGTGCCAAACGAAAACTTTCGGAAAAAAGGGTGAAACGCAAAAAAGAAATGTTATTAAATCGAACCAAATACAGTTCCGGATTATCGAATCAGTCGCATTGGCAAGATTCCTACGAACTCGCCGTCACGAATCATTACAGTCCAGAGTTGCGGGCTAAGATAATGAAATACAGCAATAAGCTAGGTAACACACCGAACATGGGATATTCGTTGAATGCGCATTTATGTACAACAGTGCCGCACGCCGGCGGTAAAATATTAATTGCGACGAAAGACTTGAAAGAAAATTCCCCCGTGATCGAGCTCAGAGGCAAATATATGTTATCGAATCAGCATCGGCCCCAACAGCAGAATTCAGTGAGAGCTGGAAGTCAGAAACCGGGTCCTTTTGTATTCTTCTACAGGCTACCGAAGGACAATATTCAGATCTGCATTGATACGAGAACATACGGAAACGAAGCTCGGTTTGTCAGAAGGTCGTGTAAGCCTAACGCCGAACTACAGCACTGTATCGTCAAGGGAACGTTACATGTATATTTAGTTACAATATCTGTGATACAATCAAACACTGAAATTACAGTTGGTCATGACGCAGATGGAACTAAACAACCTTGCGCCTGCGGGAATCCCAAGCATTGCAAAATGAATGGAATGAACACATTGGCAAGTCGTAAAATTATAGAATATCCTTCTAGAGAAAAACGCAGTAGAAACAGATGTTACAGTGCTTCGTCGCCCGTCTCGCCTCCTGCGGCACCAGTACTGACGCCCGTTAAAGAGAATCCACCACCATTTATAAAGGAAGATAAATTTTCTCCTTTTAAACACGAAAAATTGTCGCCTTTGAAACAAGAAAAGTTGTCTCCTTTTAAACAAGAAAAATTGTCCCCTATCAAAGATGAATATCCGATGTCGCTGGTTAAAACGGCAGCTATAACTCTTGACTTTGATGAACCTATGAAATTGGAACCGTTAATGGAAGACAAACCCGAGATAGATTTAACAGCCAAAGAAGAAATGAAACCTGAGGATTTAGATGAACCGGATTTTATTAAAACCGAGTCTACTCTTGAAGAAAAAATAGAAGAAGCAAAAAACGAGCCTGAGGAAGAAGAAGAAGAAGAAACGCACGAACCGATAAAAGAAGTATTTGAAGATGAGAAAATTTTAGAAGATAAAATTGAGAAACCATTGTCGCCTGCACCTCAGACAGAGCTCGTATCCTCAGACGACGAGAAACTGGAGACATTGGAAGAGAAGACACCCAAAGAGGAACTAACTATGGAAGACGAAAAGACGCTTAAAGAAATTACGGCGAAATCTGCTTGTCATGACAGATCCTCGAGGTCTAGTAGAACTGTTTGTTCTAATCACGACTCTCTTGATGATAAAACGGATGACTCTCAAGATAGAATACAAACAAGAATTAAAGAGAAGGATAAGAAAAAAATGACTCGAGAGGAACGTAAAATGGAAGCCATAATGAAAGCTTTTGAAAGAATGGAAAAAGCTCAACAAAGGAAACAGGAAGTTAAAGAGCGACAAAAACGAAGGGAATCAGATCCACACCCAAATTCATTTGATAAAGATGATGAAGACGAAATTCATGTTTCTACAAAGAAAAGAAAGAGACGCAAGGGCCGCGCCCGCACCACGTCGCAGTCCGCGCGACGGAGACTCAACTCTGCAGACAGCGACCTCGCCACTTCCGCAGACGAAGCCGCCCACGTCGCCGGGAACAATGAGCACGACAAACCTGGGGAACAAGTCTCAGAGGATTTGGGGTTGAGTTCTGCTTGTTTGCTGGTCGAAGCCGCGGTCGGTTCTGTCGAGTCTGCTTTCAAGCTGCCCAAAACCAAGAAAACAATAGCGACGGAATGGATAGGGCGCTCCCCGGAACGAACGCCATCTCCATACCGGTCGCCGTACAGACCGACGCTCGTGTCGGCGCCGTCGCTGGAGAGCTTAGTGAGAGTGGCGAGCACCATGATCGGCGACCTCAGTGGCGGCCAGGACCTCGACAATGAAGAGAACGCGAGGTCGTCTCCGCCACGTACGCCGGCGCGGGACAGGAATCGACCCCCTAAGAAATCCAAGAGGATCACTAGAAGTACGCCACCCGAAGTGCCTGAAGCTCCTCCGCCCATATTACCGCAACACAGCGCTAAAAAAAGATGGCTGCGACAAGCCATCAGCGAAGAGAGCGATTTCCCTTGTGCAGAGTCTCCTCCGAATGAAATGGTGACTCCGCTTAAGAAGCGTCGGCTCGCAAGGGAATCTTTATCGTGCGAACAGAATACCATTGTGCCTTGTAATGATGATACCTCGCCAGTTTTAACGTCAGAAGACTCCCCAGTTAAAGACGATTCTGCGTTATCGCGGCAGTATAAAGTGCGTAATATAATGGACAGTATTTATGGTAGGGACCGGACGCGATCGGACAGTGGTCAAGGTTCTGATGATCAGTGCAATATGGAACATGACGTGTTAAATGTTAATCTAAAAGGACCTCACGATAGTGAAAACATTAGGAGGATTATAGGAGTACCCACGCCAGAAGACGAAGAACCGCTGGATATAACAAGACCAGAAGATATCAAAATTAATAATAATAATGTTGATTTAGAAGAGAATAATTACAATAAGGTAGTGCCGATGGAGATCGACAATACTATGCCACAGCCAAAGATACAAGAGTCGATAGAGAACATGGACTCAAAATCGATAGGTAGCCCCAGCGAAAAGCCAAACAGTTGTCAGTCGGCCGACACGAGCGGCAACTCCTCACCGCAACGCGACGAGATGGACGACATTCAGAAAAAAATACACTCATTCCACACGGAAAATATTTTAATGCTAAAAAGTAGAAATAAGAAACCAAAAGAGAAACGGAAGAAAGTCAATTTAAATTTTGACTTGAGCATGGTGGACGACCAGATCAGTATTCAACTACGCACAGACGCCGAGAACGGGGGTAAGGGTCTGGACATCAACGGAGATTTACTCGATGACGTTAGCAATTCAGTGAACGAAGACGGCAAGTATAGTATTTCACCAGAAAATATACCTCTGCCGCCGTCTGAATCTGTTACAATTCTCTCGCCAGAAAATATACCCTTACCAAAAGATCCTAGTCCAGAGCTAGTTATGCCGCTTCTAGAAACAATACCCCTTCCAGAAGAAGAACCTACGGAACCAGTCAAAACCATACTACAAATTGGTCCCGTGGAAAAAGAAGAAAAAAATGCTCCAATCGAGAGGCCCTTAGTGTTAGACAACAACACCACGCTACCGTTTACTTCGCGTTTCAGCTCAACCGGACTCTTCTCTGGTATATTTAGTAACATGTCGCAATCGTTCAATGTGGACAGTCAAGCTAACGAGAACGTTCCGAACATGTCGATAATAAAAAGTGCTATAGATAGGACTACAAGTTTAGACAGTGGTTTGTTTGATAAAGAAAGTATTACGCCTGCCGATGAACTGAAAAGTGTCCAGGAAATACTGACCCGTGTTAACAATATGGATTCAAATAACAGTGTGATATTGTCGGGAGTGTTAAAGAGCTCTAACAAAGCTGGGCTGATGGCGCCGTCGCCTGCCAAGTCCGACGCCAAGCCTTACTGCCCTGGGAGCAACGACCCCAGGCTCAACCCCCCGCCCGTAGAGAAACCAAAACCGGTTAGAAGGAAGCTCTCTATAAGCGAGTACCGCAAAAGGCTCGCGGGGGCGGGCGGGGAGGAGCCGGTCCGCGAGGGGGGCGCGTCCTCCTCGTCGTCGGCCGGGGACCTCTCCCCGCGGCCCCTCGACGAGCTCGACCAGCGTCTGCACAAGGACATCGGCGCCGAACAACCGCACAAAGATGGCGCCGGCGCGACGAAGCGGTGCGACAGGTAG
Protein
MSASSEYEPSARQDYGPAASSENVFENVLDHNLINMNVPSIRTPVLRTVPVSPTQRDPEPDSTNPESIIRSIHQVDKEIDYHISEKRCDSEMSVETLSGIVRIEENIDNVGHIAYPVLQEADDSSDGHYVENSTALIQAPISTAIVQNVTKLPQNFTINVDAAVGNITTIQNVAQDVAGSPTLWLPTILTTSAAPPDLKDDERPQAGVSQIIITSESYVNELNHAGRRGNIIAETGYINRPKSSKVQILSNISIPKNTTYSQQYIPSCKEVSTPVYATQNHVYKLNTNLQKHLNSSVLCSKPSKNQSLIGCASLTPTVINNSPIKNVSYSHTFTKNASLSKTINKVNNGANLNAMVASSTGNTPCHILSRVVSAPNKMSVHSGRKLNTLKGSKSSQVSSQKNQSRPIKIIQQTGSSTHKSEAKTWPVASVTYKSQQPTFGVVDSNTSKIIQKVGSPTHKNQSIPLTKFPAKGERLILQSPCGPVLISTAPISTSLPKTPHYVQSGATPNLRYVQTFSSTENQSMTSQVTANQQLTAQILHSLSQPKLMLQQSSPTNHTLSPMLLEEPVELKPVNQKRIVFGDKSTLLTVEDIVGVEERPNLSEELRRYSFQPLAFVMLDHTYSLPAQKLATSSAPTTPVATAPPPTVATPPAAAPPPPSPTKRTSPVILSTATYEPAVAPPSPAPVPPPPAAPAPPVEAAPLPDDDAASVISSLDGDRRPEAGGSDTETAPEGEEEGKTRCICDFTHDDGYMICCDRCGEWQHVDCMGIDRQNIPDAYMCELCQPRPIDRRHARAIQMRKREELNALGASDSDSSECLRQSGQRRKRLLTVTTYTNTSRSSVTTYNSAAPAAPTALPTLPTSTLPPVAKRGPKKPKKPDVMRKGAKRKLSEKRVKRKKEMLLNRTKYSSGLSNQSHWQDSYELAVTNHYSPELRAKIMKYSNKLGNTPNMGYSLNAHLCTTVPHAGGKILIATKDLKENSPVIELRGKYMLSNQHRPQQQNSVRAGSQKPGPFVFFYRLPKDNIQICIDTRTYGNEARFVRRSCKPNAELQHCIVKGTLHVYLVTISVIQSNTEITVGHDADGTKQPCACGNPKHCKMNGMNTLASRKIIEYPSREKRSRNRCYSASSPVSPPAAPVLTPVKENPPPFIKEDKFSPFKHEKLSPLKQEKLSPFKQEKLSPIKDEYPMSLVKTAAITLDFDEPMKLEPLMEDKPEIDLTAKEEMKPEDLDEPDFIKTESTLEEKIEEAKNEPEEEEEEETHEPIKEVFEDEKILEDKIEKPLSPAPQTELVSSDDEKLETLEEKTPKEELTMEDEKTLKEITAKSACHDRSSRSSRTVCSNHDSLDDKTDDSQDRIQTRIKEKDKKKMTREERKMEAIMKAFERMEKAQQRKQEVKERQKRRESDPHPNSFDKDDEDEIHVSTKKRKRRKGRARTTSQSARRRLNSADSDLATSADEAAHVAGNNEHDKPGEQVSEDLGLSSACLLVEAAVGSVESAFKLPKTKKTIATEWIGRSPERTPSPYRSPYRPTLVSAPSLESLVRVASTMIGDLSGGQDLDNEENARSSPPRTPARDRNRPPKKSKRITRSTPPEVPEAPPPILPQHSAKKRWLRQAISEESDFPCAESPPNEMVTPLKKRRLARESLSCEQNTIVPCNDDTSPVLTSEDSPVKDDSALSRQYKVRNIMDSIYGRDRTRSDSGQGSDDQCNMEHDVLNVNLKGPHDSENIRRIIGVPTPEDEEPLDITRPEDIKINNNNVDLEENNYNKVVPMEIDNTMPQPKIQESIENMDSKSIGSPSEKPNSCQSADTSGNSSPQRDEMDDIQKKIHSFHTENILMLKSRNKKPKEKRKKVNLNFDLSMVDDQISIQLRTDAENGGKGLDINGDLLDDVSNSVNEDGKYSISPENIPLPPSESVTILSPENIPLPKDPSPELVMPLLETIPLPEEEPTEPVKTILQIGPVEKEEKNAPIERPLVLDNNTTLPFTSRFSSTGLFSGIFSNMSQSFNVDSQANENVPNMSIIKSAIDRTTSLDSGLFDKESITPADELKSVQEILTRVNNMDSNNSVILSGVLKSSNKAGLMAPSPAKSDAKPYCPGSNDPRLNPPPVEKPKPVRRKLSISEYRKRLAGAGGEEPVREGGASSSSSAGDLSPRPLDELDQRLHKDIGAEQPHKDGAGATKRCDR

Summary

Uniprot
ProteinModelPortal
PDB
2LV9     E-value=5.56151e-27,     Score=308

Ontologies

Topology

Length:
2181
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00094
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  2181
 
 

Population Genetic Test Statistics

Pi
24.90882
Theta
6.018
Tajima's D
0.065136
CLR
14.126165
CSRT
0.407929603519824
Interpretation
Uncertain
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